RNA–Protein interactions for RNA: ENST00000364522.1

RNU6-1078P-201, Transcript of RNA, U6 small nuclear 1078, pseudogene, humanhuman

BASIC

Gene RNU6-1078P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1078P-201ENST00000364522 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
RNU6-1078P-201ENST00000364522 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
RNU6-1078P-201ENST00000364522 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.04
RNU6-1078P-201ENST00000364522 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
RNU6-1078P-201ENST00000364522 FOXD1Q16676 465 aa14.18□□□□□ -0.14
RNU6-1078P-201ENST00000364522 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
RNU6-1078P-201ENST00000364522 MSH5O43196 834 aa13.63□□□□□ -0.23
RNU6-1078P-201ENST00000364522 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
RNU6-1078P-201ENST00000364522 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
RNU6-1078P-201ENST00000364522 ADRA2BP18089 450 aa12.86□□□□□ -0.35
RNU6-1078P-201ENST00000364522 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
RNU6-1078P-201ENST00000364522 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
RNU6-1078P-201ENST00000364522 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
RNU6-1078P-201ENST00000364522 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
RNU6-1078P-201ENST00000364522 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
RNU6-1078P-201ENST00000364522 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
RNU6-1078P-201ENST00000364522 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
RNU6-1078P-201ENST00000364522 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
RNU6-1078P-201ENST00000364522 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
RNU6-1078P-201ENST00000364522 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
RNU6-1078P-201ENST00000364522 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
RNU6-1078P-201ENST00000364522 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
RNU6-1078P-201ENST00000364522 DNAJC5BQ9UF47 199 aa11.12□□□□□ -0.63
RNU6-1078P-201ENST00000364522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNU6-1078P-201ENST00000364522 KCNA4P22459 653 aa10.97□□□□□ -0.65
RNU6-1078P-201ENST00000364522 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
RNU6-1078P-201ENST00000364522 POTEHQ6S545 545 aa10.86□□□□□ -0.67
RNU6-1078P-201ENST00000364522 CAPN15O75808 1086 aa10.68□□□□□ -0.7
RNU6-1078P-201ENST00000364522 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
RNU6-1078P-201ENST00000364522 DSG3P32926 999 aa10.58□□□□□ -0.72
RNU6-1078P-201ENST00000364522 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
RNU6-1078P-201ENST00000364522 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
RNU6-1078P-201ENST00000364522 SLC4A1APQ9BWU0 796 aaKnown RBP10.52□□□□□ -0.73
RNU6-1078P-201ENST00000364522 APLP2Q06481 763 aa10.51□□□□□ -0.73
RNU6-1078P-201ENST00000364522 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
RNU6-1078P-201ENST00000364522 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
RNU6-1078P-201ENST00000364522 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
RNU6-1078P-201ENST00000364522 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
RNU6-1078P-201ENST00000364522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.33□□□□□ -0.76
RNU6-1078P-201ENST00000364522 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
RNU6-1078P-201ENST00000364522 ABCB7O75027 752 aa10.31□□□□□ -0.76
RNU6-1078P-201ENST00000364522 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
RNU6-1078P-201ENST00000364522 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
RNU6-1078P-201ENST00000364522 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
RNU6-1078P-201ENST00000364522 ZBTB22O15209 634 aa10.12□□□□□ -0.79
RNU6-1078P-201ENST00000364522 SLC4A2P04920 1241 aa10.1□□□□□ -0.79
RNU6-1078P-201ENST00000364522 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
RNU6-1078P-201ENST00000364522 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
RNU6-1078P-201ENST00000364522 POLA2Q14181 598 aa9.96□□□□□ -0.82
RNU6-1078P-201ENST00000364522 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
RNU6-1078P-201ENST00000364522 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
RNU6-1078P-201ENST00000364522 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
RNU6-1078P-201ENST00000364522 HAX1O00165 279 aa9.82□□□□□ -0.84
RNU6-1078P-201ENST00000364522 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
RNU6-1078P-201ENST00000364522 REM2Q8IYK8 340 aaPredicted RBP9.74□□□□□ -0.85
RNU6-1078P-201ENST00000364522 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
RNU6-1078P-201ENST00000364522 OSCARQ8IYS5 282 aa9.62□□□□□ -0.87
RNU6-1078P-201ENST00000364522 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
RNU6-1078P-201ENST00000364522 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNU6-1078P-201ENST00000364522 ATF5Q9Y2D1 282 aaPredicted RBP9.46□□□□□ -0.9
RNU6-1078P-201ENST00000364522 FBLN2P98095 1184 aa9.44□□□□□ -0.9
RNU6-1078P-201ENST00000364522 SPDYE2BA6NHP3 402 aa9.43□□□□□ -0.9
RNU6-1078P-201ENST00000364522 SPDYE6P0CI01 402 aa9.43□□□□□ -0.9
RNU6-1078P-201ENST00000364522 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
RNU6-1078P-201ENST00000364522 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
RNU6-1078P-201ENST00000364522 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
RNU6-1078P-201ENST00000364522 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
RNU6-1078P-201ENST00000364522 EVX2Q03828 476 aa9.41□□□□□ -0.9
RNU6-1078P-201ENST00000364522 LHX8Q68G74 356 aa9.38□□□□□ -0.91
RNU6-1078P-201ENST00000364522 FKBP8Q14318 412 aa9.33□□□□□ -0.92
RNU6-1078P-201ENST00000364522 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
RNU6-1078P-201ENST00000364522 GABBR2O75899 941 aa9.31□□□□□ -0.92
RNU6-1078P-201ENST00000364522 ZNF692Q9BU19 519 aaPredicted RBP9.26□□□□□ -0.93
RNU6-1078P-201ENST00000364522 PLSCR2Q9NRY7 297 aa9.23□□□□□ -0.93
RNU6-1078P-201ENST00000364522 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
RNU6-1078P-201ENST00000364522 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
RNU6-1078P-201ENST00000364522 CLCN6P51797 869 aa9.19□□□□□ -0.94
RNU6-1078P-201ENST00000364522 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
RNU6-1078P-201ENST00000364522 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
RNU6-1078P-201ENST00000364522 SSUH2Q9Y2M2 353 aa9.15□□□□□ -0.94
RNU6-1078P-201ENST00000364522 DCBLD2Q96PD2 775 aa9.13□□□□□ -0.95
RNU6-1078P-201ENST00000364522 CD44P16070 742 aaKnown RBP9.11□□□□□ -0.95
RNU6-1078P-201ENST00000364522 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
RNU6-1078P-201ENST00000364522 FARP1Q9Y4F1 1045 aaPredicted RBP9.03□□□□□ -0.96
RNU6-1078P-201ENST00000364522 MKRN4PQ13434 485 aaPredicted RBP9.02□□□□□ -0.97
RNU6-1078P-201ENST00000364522 POTEIP0CG38 1075 aa8.98□□□□□ -0.97
RNU6-1078P-201ENST00000364522 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
RNU6-1078P-201ENST00000364522 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
RNU6-1078P-201ENST00000364522 PROM2Q8N271 834 aa8.93□□□□□ -0.98
RNU6-1078P-201ENST00000364522 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
RNU6-1078P-201ENST00000364522 PAK3O75914 559 aaPredicted RBP8.92□□□□□ -0.98
RNU6-1078P-201ENST00000364522 ZNF579Q8NAF0 562 aaKnown RBP8.91□□□□□ -0.98
RNU6-1078P-201ENST00000364522 FBXO3Q9UK99 471 aa8.9□□□□□ -0.98
RNU6-1078P-201ENST00000364522 POTEMA6NI47 508 aa8.85□□□□□ -0.99
RNU6-1078P-201ENST00000364522 STAG3Q9UJ98 1225 aa8.85□□□□□ -0.99
RNU6-1078P-201ENST00000364522 PCDH10Q9P2E7 1040 aa8.83□□□□□ -1
RNU6-1078P-201ENST00000364522 POTEGQ6S5H5 508 aa8.81□□□□□ -1
RNU6-1078P-201ENST00000364522 OTUD5Q96G74 571 aa8.8□□□□□ -1
RNU6-1078P-201ENST00000364522 GALR2O43603 387 aaPredicted RBP8.79□□□□□ -1
RNU6-1078P-201ENST00000364522 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms