RNA–Protein interactions for RNA: ENST00000364207.1

RNU6-188P-201, Transcript of RNA, U6 small nuclear 188, pseudogene, humanhuman

BASIC

Gene RNU6-188P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-188P-201ENST00000364207 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
RNU6-188P-201ENST00000364207 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
RNU6-188P-201ENST00000364207 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
RNU6-188P-201ENST00000364207 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
RNU6-188P-201ENST00000364207 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
RNU6-188P-201ENST00000364207 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
RNU6-188P-201ENST00000364207 FOXD1Q16676 465 aa12.5□□□□□ -0.41
RNU6-188P-201ENST00000364207 ADRA2BP18089 450 aa12.04□□□□□ -0.48
RNU6-188P-201ENST00000364207 PPP6R1Q9UPN7 881 aa12.01□□□□□ -0.49
RNU6-188P-201ENST00000364207 MSH5O43196 834 aa11.92□□□□□ -0.5
RNU6-188P-201ENST00000364207 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
RNU6-188P-201ENST00000364207 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
RNU6-188P-201ENST00000364207 SCAF1Q9H7N4 1312 aaKnown RBP11.24□□□□□ -0.61
RNU6-188P-201ENST00000364207 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
RNU6-188P-201ENST00000364207 KCNA4P22459 653 aa11.12□□□□□ -0.63
RNU6-188P-201ENST00000364207 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
RNU6-188P-201ENST00000364207 MAPK8IP2Q13387 824 aaPredicted RBP10.85□□□□□ -0.67
RNU6-188P-201ENST00000364207 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
RNU6-188P-201ENST00000364207 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
RNU6-188P-201ENST00000364207 RNF216Q9NWF9 866 aaPredicted RBP10.74□□□□□ -0.69
RNU6-188P-201ENST00000364207 SLC4A1APQ9BWU0 796 aaKnown RBP10.7□□□□□ -0.7
RNU6-188P-201ENST00000364207 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
RNU6-188P-201ENST00000364207 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
RNU6-188P-201ENST00000364207 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
RNU6-188P-201ENST00000364207 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
RNU6-188P-201ENST00000364207 DCAF8L1A6NGE4 600 aa10.34□□□□□ -0.75
RNU6-188P-201ENST00000364207 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
RNU6-188P-201ENST00000364207 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
RNU6-188P-201ENST00000364207 ZBTB22O15209 634 aa10.17□□□□□ -0.78
RNU6-188P-201ENST00000364207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.17□□□□□ -0.78
RNU6-188P-201ENST00000364207 SLC4A2P04920 1241 aa10.16□□□□□ -0.78
RNU6-188P-201ENST00000364207 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
RNU6-188P-201ENST00000364207 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
RNU6-188P-201ENST00000364207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
RNU6-188P-201ENST00000364207 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
RNU6-188P-201ENST00000364207 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
RNU6-188P-201ENST00000364207 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
RNU6-188P-201ENST00000364207 APLP2Q06481 763 aa9.96□□□□□ -0.82
RNU6-188P-201ENST00000364207 U3KPZ7 1027 aaPredicted RBP9.93□□□□□ -0.82
RNU6-188P-201ENST00000364207 C1QBPQ07021 282 aaKnown RBP9.92□□□□□ -0.82
RNU6-188P-201ENST00000364207 POTEHQ6S545 545 aa9.86□□□□□ -0.83
RNU6-188P-201ENST00000364207 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
RNU6-188P-201ENST00000364207 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.86
RNU6-188P-201ENST00000364207 CAPN15O75808 1086 aa9.64□□□□□ -0.87
RNU6-188P-201ENST00000364207 TRHP20396 242 aaPredicted RBP9.6□□□□□ -0.87
RNU6-188P-201ENST00000364207 SPINK5Q9NQ38 1064 aaPredicted RBP9.58□□□□□ -0.88
RNU6-188P-201ENST00000364207 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
RNU6-188P-201ENST00000364207 POLA2Q14181 598 aa9.46□□□□□ -0.9
RNU6-188P-201ENST00000364207 FBLN2P98095 1184 aa9.45□□□□□ -0.9
RNU6-188P-201ENST00000364207 ABCB7O75027 752 aa9.39□□□□□ -0.91
RNU6-188P-201ENST00000364207 DSG3P32926 999 aa9.39□□□□□ -0.91
RNU6-188P-201ENST00000364207 FKBP8Q14318 412 aa9.35□□□□□ -0.91
RNU6-188P-201ENST00000364207 MKRN4PQ13434 485 aaPredicted RBP9.27□□□□□ -0.93
RNU6-188P-201ENST00000364207 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
RNU6-188P-201ENST00000364207 SPDYE2BA6NHP3 402 aa9.16□□□□□ -0.94
RNU6-188P-201ENST00000364207 SPDYE6P0CI01 402 aa9.16□□□□□ -0.94
RNU6-188P-201ENST00000364207 SPDYE2Q495Y8 402 aa9.16□□□□□ -0.94
RNU6-188P-201ENST00000364207 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
RNU6-188P-201ENST00000364207 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
RNU6-188P-201ENST00000364207 FBXO3Q9UK99 471 aa9.11□□□□□ -0.95
RNU6-188P-201ENST00000364207 RBM42Q9BTD8 480 aaKnown RBP9.09□□□□□ -0.95
RNU6-188P-201ENST00000364207 PROM2Q8N271 834 aa9.06□□□□□ -0.96
RNU6-188P-201ENST00000364207 SSUH2Q9Y2M2 353 aa9.04□□□□□ -0.96
RNU6-188P-201ENST00000364207 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
RNU6-188P-201ENST00000364207 PABPN1Q86U42 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNU6-188P-201ENST00000364207 AKT1S1Q96B36 256 aa8.95□□□□□ -0.98
RNU6-188P-201ENST00000364207 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
RNU6-188P-201ENST00000364207 CHRDL2Q6WN34 429 aa8.91□□□□□ -0.98
RNU6-188P-201ENST00000364207 VASPP50552 380 aaPredicted RBP8.88□□□□□ -0.99
RNU6-188P-201ENST00000364207 SPDYE1Q8NFV5 336 aaPredicted RBP8.87□□□□□ -0.99
RNU6-188P-201ENST00000364207 AMER1Q5JTC6 1135 aaPredicted RBP8.86□□□□□ -0.99
RNU6-188P-201ENST00000364207 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
RNU6-188P-201ENST00000364207 REM2Q8IYK8 340 aaPredicted RBP8.8□□□□□ -1
RNU6-188P-201ENST00000364207 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
RNU6-188P-201ENST00000364207 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
RNU6-188P-201ENST00000364207 CLEC11AQ9Y240 323 aa8.77□□□□□ -1.01
RNU6-188P-201ENST00000364207 MIER1Q8N108 512 aa8.76□□□□□ -1.01
RNU6-188P-201ENST00000364207 KLHL34Q8N239 644 aa8.75□□□□□ -1.01
RNU6-188P-201ENST00000364207 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
RNU6-188P-201ENST00000364207 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
RNU6-188P-201ENST00000364207 RTN4Q9NQC3 1192 aaKnown RBP8.68□□□□□ -1.02
RNU6-188P-201ENST00000364207 PITPNM1O00562 1244 aa8.67□□□□□ -1.02
RNU6-188P-201ENST00000364207 SPOCK2Q92563 424 aa8.67□□□□□ -1.02
RNU6-188P-201ENST00000364207 NPM1P06748 294 aaKnown RBP eCLIP8.58□□□□□ -1.04
RNU6-188P-201ENST00000364207 PIP4P2Q8N4L2 257 aa8.57□□□□□ -1.04
RNU6-188P-201ENST00000364207 CREBZFQ9NS37 354 aa8.57□□□□□ -1.04
RNU6-188P-201ENST00000364207 HAX1O00165 279 aa8.54□□□□□ -1.04
RNU6-188P-201ENST00000364207 GSE1Q14687 1217 aa8.53□□□□□ -1.04
RNU6-188P-201ENST00000364207 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
RNU6-188P-201ENST00000364207 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNU6-188P-201ENST00000364207 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
RNU6-188P-201ENST00000364207 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
RNU6-188P-201ENST00000364207 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
RNU6-188P-201ENST00000364207 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
RNU6-188P-201ENST00000364207 MNX1P50219 401 aaPredicted RBP8.47□□□□□ -1.05
RNU6-188P-201ENST00000364207 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
RNU6-188P-201ENST00000364207 NUBP1P53384 320 aa8.46□□□□□ -1.06
RNU6-188P-201ENST00000364207 PKD2Q13563 968 aa8.46□□□□□ -1.06
RNU6-188P-201ENST00000364207 FARP1Q9Y4F1 1045 aaPredicted RBP8.46□□□□□ -1.06
RNU6-188P-201ENST00000364207 DCAF8Q5TAQ9 597 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms