RNA–Protein interactions for RNA: ENST00000363010.1

RNU6-888P-201, Transcript of RNA, U6 small nuclear 888, pseudogene, humanhuman

BASIC

Gene RNU6-888P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-888P-201ENST00000363010 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
RNU6-888P-201ENST00000363010 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
RNU6-888P-201ENST00000363010 SENP3Q9H4L4 574 aaPredicted RBP9.6□□□□□ -0.87
RNU6-888P-201ENST00000363010 PHF23Q9BUL5 403 aaPredicted RBP9.5□□□□□ -0.89
RNU6-888P-201ENST00000363010 FOXD1Q16676 465 aa8.99□□□□□ -0.97
RNU6-888P-201ENST00000363010 PLPPR3Q6T4P5 718 aa8.55□□□□□ -1.04
RNU6-888P-201ENST00000363010 POTEDQ86YR6 584 aa8.49□□□□□ -1.05
RNU6-888P-201ENST00000363010 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
RNU6-888P-201ENST00000363010 ADRA2BP18089 450 aa8.41□□□□□ -1.06
RNU6-888P-201ENST00000363010 PIAS4Q8N2W9 510 aaPredicted RBP8.41□□□□□ -1.06
RNU6-888P-201ENST00000363010 MSH5O43196 834 aa8.36□□□□□ -1.07
RNU6-888P-201ENST00000363010 MAPK8IP2Q13387 824 aaPredicted RBP7.74□□□□□ -1.17
RNU6-888P-201ENST00000363010 DMRT2Q9Y5R5 561 aa7.62□□□□□ -1.19
RNU6-888P-201ENST00000363010 SCAF1Q9H7N4 1312 aaKnown RBP7.61□□□□□ -1.19
RNU6-888P-201ENST00000363010 PPP4R3CPQ6ZMV5 832 aa7.53□□□□□ -1.2
RNU6-888P-201ENST00000363010 DCAF8L1A6NGE4 600 aa7.38□□□□□ -1.23
RNU6-888P-201ENST00000363010 CNKSR2Q8WXI2 1034 aa7.35□□□□□ -1.23
RNU6-888P-201ENST00000363010 HOXD11P31277 338 aaPredicted RBP7.33□□□□□ -1.24
RNU6-888P-201ENST00000363010 RNF216Q9NWF9 866 aaPredicted RBP7.28□□□□□ -1.24
RNU6-888P-201ENST00000363010 CACNB1Q02641 598 aaPredicted RBP7.21□□□□□ -1.26
RNU6-888P-201ENST00000363010 NCBP3Q53F19 620 aaKnown RBP7.2□□□□□ -1.26
RNU6-888P-201ENST00000363010 RNF39Q9H2S5 420 aa7.15□□□□□ -1.26
RNU6-888P-201ENST00000363010 NPM3O75607 178 aaKnown RBP7.14□□□□□ -1.27
RNU6-888P-201ENST00000363010 KCNA4P22459 653 aa7.03□□□□□ -1.28
RNU6-888P-201ENST00000363010 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
RNU6-888P-201ENST00000363010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.02□□□□□ -1.29
RNU6-888P-201ENST00000363010 DNAJC5BQ9UF47 199 aa7□□□□□ -1.29
RNU6-888P-201ENST00000363010 U3KPZ7 1027 aaPredicted RBP6.88□□□□□ -1.31
RNU6-888P-201ENST00000363010 SLC4A2P04920 1241 aa6.82□□□□□ -1.32
RNU6-888P-201ENST00000363010 SPINK5Q9NQ38 1064 aaPredicted RBP6.8□□□□□ -1.32
RNU6-888P-201ENST00000363010 CAPN15O75808 1086 aa6.78□□□□□ -1.32
RNU6-888P-201ENST00000363010 DSG3P32926 999 aa6.71□□□□□ -1.34
RNU6-888P-201ENST00000363010 TRHP20396 242 aaPredicted RBP6.68□□□□□ -1.34
RNU6-888P-201ENST00000363010 ABCB7O75027 752 aa6.66□□□□□ -1.34
RNU6-888P-201ENST00000363010 SLC4A1APQ9BWU0 796 aaKnown RBP6.62□□□□□ -1.35
RNU6-888P-201ENST00000363010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.61□□□□□ -1.35
RNU6-888P-201ENST00000363010 APLP2Q06481 763 aa6.61□□□□□ -1.35
RNU6-888P-201ENST00000363010 HNRNPUL2Q1KMD3 747 aaKnown RBP6.61□□□□□ -1.35
RNU6-888P-201ENST00000363010 SAMD1Q6SPF0 538 aaPredicted RBP6.6□□□□□ -1.35
RNU6-888P-201ENST00000363010 ZNF219Q9P2Y4 722 aaPredicted RBP6.6□□□□□ -1.35
RNU6-888P-201ENST00000363010 MYCNP04198 464 aaPredicted RBP6.58□□□□□ -1.36
RNU6-888P-201ENST00000363010 FOXD4L1Q9NU39 408 aa6.52□□□□□ -1.37
RNU6-888P-201ENST00000363010 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
RNU6-888P-201ENST00000363010 ZBTB22O15209 634 aa6.48□□□□□ -1.37
RNU6-888P-201ENST00000363010 POLA2Q14181 598 aa6.48□□□□□ -1.37
RNU6-888P-201ENST00000363010 POTEHQ6S545 545 aa6.42□□□□□ -1.38
RNU6-888P-201ENST00000363010 RBM42Q9BTD8 480 aaKnown RBP6.36□□□□□ -1.39
RNU6-888P-201ENST00000363010 OSCARQ8IYS5 282 aa6.3□□□□□ -1.4
RNU6-888P-201ENST00000363010 ZBTB12Q9Y330 459 aaPredicted RBP6.29□□□□□ -1.4
RNU6-888P-201ENST00000363010 ATXN8OSP0DMR3 200 aa6.27□□□□□ -1.41
RNU6-888P-201ENST00000363010 CHRDL2Q6WN34 429 aa6.26□□□□□ -1.41
RNU6-888P-201ENST00000363010 AKT1S1Q96B36 256 aa6.23□□□□□ -1.41
RNU6-888P-201ENST00000363010 REM2Q8IYK8 340 aaPredicted RBP6.2□□□□□ -1.42
RNU6-888P-201ENST00000363010 FBLN2P98095 1184 aa6.18□□□□□ -1.42
RNU6-888P-201ENST00000363010 MKRN4PQ13434 485 aaPredicted RBP6.17□□□□□ -1.42
RNU6-888P-201ENST00000363010 CSRNP3Q8WYN3 585 aa6.16□□□□□ -1.42
RNU6-888P-201ENST00000363010 PITPNM1O00562 1244 aa6.15□□□□□ -1.42
RNU6-888P-201ENST00000363010 EHMT2Q96KQ7 1210 aa6.15□□□□□ -1.42
RNU6-888P-201ENST00000363010 PIP4P2Q8N4L2 257 aa6.13□□□□□ -1.43
RNU6-888P-201ENST00000363010 PLSCR2Q9NRY7 297 aa6.13□□□□□ -1.43
RNU6-888P-201ENST00000363010 SPDYE2BA6NHP3 402 aa6.11□□□□□ -1.43
RNU6-888P-201ENST00000363010 SPDYE6P0CI01 402 aa6.11□□□□□ -1.43
RNU6-888P-201ENST00000363010 SPDYE2Q495Y8 402 aa6.11□□□□□ -1.43
RNU6-888P-201ENST00000363010 FXR2P51116 673 aaKnown RBP eCLIP6.07□□□□□ -1.44
RNU6-888P-201ENST00000363010 ZNF692Q9BU19 519 aaPredicted RBP6.07□□□□□ -1.44
RNU6-888P-201ENST00000363010 CLEC11AQ9Y240 323 aa6.06□□□□□ -1.44
RNU6-888P-201ENST00000363010 SSUH2Q9Y2M2 353 aa6.04□□□□□ -1.44
RNU6-888P-201ENST00000363010 HAX1O00165 279 aa6.02□□□□□ -1.45
RNU6-888P-201ENST00000363010 SPDYE1Q8NFV5 336 aaPredicted RBP6.01□□□□□ -1.45
RNU6-888P-201ENST00000363010 SP7Q8TDD2 431 aaPredicted RBP6.01□□□□□ -1.45
RNU6-888P-201ENST00000363010 PABPN1Q86U42 306 aaKnown RBP eCLIP6□□□□□ -1.45
RNU6-888P-201ENST00000363010 PRKAR2AP13861 404 aaKnown RBP5.99□□□□□ -1.45
RNU6-888P-201ENST00000363010 EVX2Q03828 476 aa5.97□□□□□ -1.45
RNU6-888P-201ENST00000363010 CHADLQ6NUI6 762 aa5.96□□□□□ -1.46
RNU6-888P-201ENST00000363010 PRR29P0C7W0 189 aa5.93□□□□□ -1.46
RNU6-888P-201ENST00000363010 C19orf67A6NJJ6 358 aa5.88□□□□□ -1.47
RNU6-888P-201ENST00000363010 SPDYE4A6NLX3 237 aa5.87□□□□□ -1.47
RNU6-888P-201ENST00000363010 FARP1Q9Y4F1 1045 aaPredicted RBP5.83□□□□□ -1.48
RNU6-888P-201ENST00000363010 GABBR2O75899 941 aa5.8□□□□□ -1.48
RNU6-888P-201ENST00000363010 CD44P16070 742 aaKnown RBP5.8□□□□□ -1.48
RNU6-888P-201ENST00000363010 CREBZFQ9NS37 354 aa5.8□□□□□ -1.48
RNU6-888P-201ENST00000363010 STAG3Q9UJ98 1225 aa5.78□□□□□ -1.48
RNU6-888P-201ENST00000363010 ZRANB1Q9UGI0 708 aa5.73□□□□□ -1.49
RNU6-888P-201ENST00000363010 POTEIP0CG38 1075 aa5.7□□□□□ -1.5
RNU6-888P-201ENST00000363010 PROM2Q8N271 834 aa5.69□□□□□ -1.5
RNU6-888P-201ENST00000363010 MNX1P50219 401 aaPredicted RBP5.68□□□□□ -1.5
RNU6-888P-201ENST00000363010 ZNF579Q8NAF0 562 aaKnown RBP5.68□□□□□ -1.5
RNU6-888P-201ENST00000363010 PHF12Q96QT6 1004 aa5.67□□□□□ -1.5
RNU6-888P-201ENST00000363010 GALR2O43603 387 aaPredicted RBP5.66□□□□□ -1.5
RNU6-888P-201ENST00000363010 PAK3O75914 559 aaPredicted RBP5.65□□□□□ -1.5
RNU6-888P-201ENST00000363010 NPM1P06748 294 aaKnown RBP eCLIP5.65□□□□□ -1.5
RNU6-888P-201ENST00000363010 LHX8Q68G74 356 aa5.65□□□□□ -1.5
RNU6-888P-201ENST00000363010 DCBLD2Q96PD2 775 aa5.64□□□□□ -1.51
RNU6-888P-201ENST00000363010 CLCN6P51797 869 aa5.61□□□□□ -1.51
RNU6-888P-201ENST00000363010 FKBP8Q14318 412 aa5.61□□□□□ -1.51
RNU6-888P-201ENST00000363010 TSPYL2Q9H2G4 693 aaPredicted RBP5.61□□□□□ -1.51
RNU6-888P-201ENST00000363010 MIER1Q8N108 512 aa5.6□□□□□ -1.51
RNU6-888P-201ENST00000363010 MS4A3Q96HJ5 214 aa5.57□□□□□ -1.52
RNU6-888P-201ENST00000363010 PLCD3Q8N3E9 789 aa5.56□□□□□ -1.52
RNU6-888P-201ENST00000363010 PLEKHG5O94827 1062 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms