RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
CNKSR1-201ENST00000361530 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
CNKSR1-201ENST00000361530 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
CNKSR1-201ENST00000361530 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
CNKSR1-201ENST00000361530 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
CNKSR1-201ENST00000361530 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
CNKSR1-201ENST00000361530 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.81
CNKSR1-201ENST00000361530 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
CNKSR1-201ENST00000361530 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
CNKSR1-201ENST00000361530 ABCC9O60706 1549 aa25.64■■□□□ 1.7
CNKSR1-201ENST00000361530 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
CNKSR1-201ENST00000361530 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
CNKSR1-201ENST00000361530 HRCP23327 699 aa25.55■■□□□ 1.68
CNKSR1-201ENST00000361530 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
CNKSR1-201ENST00000361530 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
CNKSR1-201ENST00000361530 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
CNKSR1-201ENST00000361530 NACADO15069 1562 aa25.19■■□□□ 1.62
CNKSR1-201ENST00000361530 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
CNKSR1-201ENST00000361530 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
CNKSR1-201ENST00000361530 PPARGC1BQ86YN6 1023 aaKnown RBP25.07■■□□□ 1.6
CNKSR1-201ENST00000361530 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
CNKSR1-201ENST00000361530 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
CNKSR1-201ENST00000361530 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
CNKSR1-201ENST00000361530 WIZO95785 1651 aa24.88■■□□□ 1.57
CNKSR1-201ENST00000361530 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
CNKSR1-201ENST00000361530 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
CNKSR1-201ENST00000361530 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
CNKSR1-201ENST00000361530 SMARCA4P51532 1647 aa24.45■■□□□ 1.5
CNKSR1-201ENST00000361530 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
CNKSR1-201ENST00000361530 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
CNKSR1-201ENST00000361530 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
CNKSR1-201ENST00000361530 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
CNKSR1-201ENST00000361530 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
CNKSR1-201ENST00000361530 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
CNKSR1-201ENST00000361530 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
CNKSR1-201ENST00000361530 SOGA1O94964 1423 aa24.17■■□□□ 1.46
CNKSR1-201ENST00000361530 BICRAQ9NZM4 1560 aa24.15■■□□□ 1.46
CNKSR1-201ENST00000361530 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
CNKSR1-201ENST00000361530 RUSC2Q8N2Y8 1516 aa24.06■■□□□ 1.44
CNKSR1-201ENST00000361530 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
CNKSR1-201ENST00000361530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
CNKSR1-201ENST00000361530 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
CNKSR1-201ENST00000361530 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
CNKSR1-201ENST00000361530 TNIKQ9UKE5 1360 aa24■■□□□ 1.43
CNKSR1-201ENST00000361530 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
CNKSR1-201ENST00000361530 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
CNKSR1-201ENST00000361530 EEA1Q15075 1411 aa23.96■■□□□ 1.43
CNKSR1-201ENST00000361530 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
CNKSR1-201ENST00000361530 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
CNKSR1-201ENST00000361530 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
CNKSR1-201ENST00000361530 GOLGA3Q08378 1498 aa23.83■■□□□ 1.41
CNKSR1-201ENST00000361530 SYNJ1O43426 1573 aa23.81■■□□□ 1.4
CNKSR1-201ENST00000361530 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
CNKSR1-201ENST00000361530 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
CNKSR1-201ENST00000361530 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
CNKSR1-201ENST00000361530 KIF21BO75037 1637 aa23.64■■□□□ 1.38
CNKSR1-201ENST00000361530 CLIP1P30622 1438 aa23.59■■□□□ 1.37
CNKSR1-201ENST00000361530 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
CNKSR1-201ENST00000361530 MYT1Q01538 1121 aa23.51■■□□□ 1.35
CNKSR1-201ENST00000361530 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
CNKSR1-201ENST00000361530 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
CNKSR1-201ENST00000361530 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
CNKSR1-201ENST00000361530 RANGAP1P46060 587 aaPredicted RBP23.47■■□□□ 1.35
CNKSR1-201ENST00000361530 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
CNKSR1-201ENST00000361530 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
CNKSR1-201ENST00000361530 APLP2Q06481 763 aa23.36■■□□□ 1.33
CNKSR1-201ENST00000361530 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
CNKSR1-201ENST00000361530 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
CNKSR1-201ENST00000361530 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
CNKSR1-201ENST00000361530 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
CNKSR1-201ENST00000361530 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
CNKSR1-201ENST00000361530 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
CNKSR1-201ENST00000361530 CUX1P39880 1505 aa23.28■■□□□ 1.32
CNKSR1-201ENST00000361530 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
CNKSR1-201ENST00000361530 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
CNKSR1-201ENST00000361530 CFTRP13569 1480 aa23.19■■□□□ 1.3
CNKSR1-201ENST00000361530 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
CNKSR1-201ENST00000361530 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
CNKSR1-201ENST00000361530 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
CNKSR1-201ENST00000361530 GTF3C3Q9Y5Q9 886 aa23.12■■□□□ 1.29
CNKSR1-201ENST00000361530 MIER1Q8N108 512 aa23.02■■□□□ 1.28
CNKSR1-201ENST00000361530 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
CNKSR1-201ENST00000361530 DHX57Q6P158 1386 aaKnown RBP22.99■■□□□ 1.27
CNKSR1-201ENST00000361530 IGF1RP08069 1367 aa22.96■■□□□ 1.27
CNKSR1-201ENST00000361530 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
CNKSR1-201ENST00000361530 CUX2O14529 1486 aa22.95■■□□□ 1.26
CNKSR1-201ENST00000361530 RRBP1Q9P2E9 1410 aaKnown RBP22.95■■□□□ 1.26
CNKSR1-201ENST00000361530 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
CNKSR1-201ENST00000361530 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
CNKSR1-201ENST00000361530 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
CNKSR1-201ENST00000361530 CCNB3Q8WWL7 1395 aa22.86■■□□□ 1.25
CNKSR1-201ENST00000361530 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
CNKSR1-201ENST00000361530 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
CNKSR1-201ENST00000361530 ITGAEP38570 1179 aa22.81■■□□□ 1.24
CNKSR1-201ENST00000361530 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
CNKSR1-201ENST00000361530 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
CNKSR1-201ENST00000361530 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
CNKSR1-201ENST00000361530 MAP3K1Q13233 1512 aa22.69■■□□□ 1.22
CNKSR1-201ENST00000361530 P3H3Q8IVL6 736 aa22.68■■□□□ 1.22
CNKSR1-201ENST00000361530 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms