RNA–Protein interactions for RNA: ENST00000359039.4

KLHL9-201, Transcript of kelch like family member 9, humanhuman

APPRIS P1 BASIC

Gene KLHL9, Length 5,710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9-201ENST00000359039 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
KLHL9-201ENST00000359039 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
KLHL9-201ENST00000359039 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
KLHL9-201ENST00000359039 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
KLHL9-201ENST00000359039 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
KLHL9-201ENST00000359039 APLP2Q06481 763 aa22.08■■□□□ 1.12
KLHL9-201ENST00000359039 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
KLHL9-201ENST00000359039 PELP1Q8IZL8 1130 aaKnown RBP21.72■■□□□ 1.07
KLHL9-201ENST00000359039 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
KLHL9-201ENST00000359039 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
KLHL9-201ENST00000359039 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
KLHL9-201ENST00000359039 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
KLHL9-201ENST00000359039 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
KLHL9-201ENST00000359039 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
KLHL9-201ENST00000359039 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
KLHL9-201ENST00000359039 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
KLHL9-201ENST00000359039 ERICH6Q7L0X2 663 aa20.83■□□□□ 0.93
KLHL9-201ENST00000359039 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
KLHL9-201ENST00000359039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
KLHL9-201ENST00000359039 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
KLHL9-201ENST00000359039 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
KLHL9-201ENST00000359039 NEFLP07196 543 aa20.6■□□□□ 0.89
KLHL9-201ENST00000359039 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
KLHL9-201ENST00000359039 ITGAEP38570 1179 aa20.5■□□□□ 0.87
KLHL9-201ENST00000359039 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
KLHL9-201ENST00000359039 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
KLHL9-201ENST00000359039 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
KLHL9-201ENST00000359039 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
KLHL9-201ENST00000359039 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
KLHL9-201ENST00000359039 DAXXQ9UER7 740 aaPredicted RBP20.13■□□□□ 0.81
KLHL9-201ENST00000359039 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
KLHL9-201ENST00000359039 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
KLHL9-201ENST00000359039 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
KLHL9-201ENST00000359039 FBLN2P98095 1184 aa19.95■□□□□ 0.78
KLHL9-201ENST00000359039 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
KLHL9-201ENST00000359039 ABCC9O60706 1549 aa19.92■□□□□ 0.78
KLHL9-201ENST00000359039 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
KLHL9-201ENST00000359039 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
KLHL9-201ENST00000359039 HRCP23327 699 aa19.77■□□□□ 0.75
KLHL9-201ENST00000359039 BCANQ96GW7 911 aa19.71■□□□□ 0.75
KLHL9-201ENST00000359039 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
KLHL9-201ENST00000359039 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
KLHL9-201ENST00000359039 SLC24A1O60721 1099 aa19.63■□□□□ 0.73
KLHL9-201ENST00000359039 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
KLHL9-201ENST00000359039 MYT1Q01538 1121 aa19.6■□□□□ 0.73
KLHL9-201ENST00000359039 ARID3CA6NKF2 412 aa19.57■□□□□ 0.72
KLHL9-201ENST00000359039 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
KLHL9-201ENST00000359039 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
KLHL9-201ENST00000359039 P3H3Q8IVL6 736 aa19.48■□□□□ 0.71
KLHL9-201ENST00000359039 NEFMP07197 916 aa19.47■□□□□ 0.71
KLHL9-201ENST00000359039 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
KLHL9-201ENST00000359039 BCL11AQ9H165 835 aa19.42■□□□□ 0.7
KLHL9-201ENST00000359039 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
KLHL9-201ENST00000359039 RTL5Q5HYW3 569 aaPredicted RBP19.41■□□□□ 0.7
KLHL9-201ENST00000359039 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
KLHL9-201ENST00000359039 ANP32CO43423 234 aa19.36■□□□□ 0.69
KLHL9-201ENST00000359039 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
KLHL9-201ENST00000359039 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
KLHL9-201ENST00000359039 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
KLHL9-201ENST00000359039 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
KLHL9-201ENST00000359039 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
KLHL9-201ENST00000359039 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
KLHL9-201ENST00000359039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.63
KLHL9-201ENST00000359039 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
KLHL9-201ENST00000359039 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
KLHL9-201ENST00000359039 A0A0G2JS52 829 aa18.93■□□□□ 0.62
KLHL9-201ENST00000359039 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
KLHL9-201ENST00000359039 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
KLHL9-201ENST00000359039 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
KLHL9-201ENST00000359039 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
KLHL9-201ENST00000359039 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
KLHL9-201ENST00000359039 GTF3C3Q9Y5Q9 886 aa18.83■□□□□ 0.61
KLHL9-201ENST00000359039 NPM2Q86SE8 214 aaKnown RBP18.82■□□□□ 0.6
KLHL9-201ENST00000359039 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
KLHL9-201ENST00000359039 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
KLHL9-201ENST00000359039 C14orf37Q86TY3 774 aa18.79■□□□□ 0.6
KLHL9-201ENST00000359039 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
KLHL9-201ENST00000359039 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
KLHL9-201ENST00000359039 PPP1R15AO75807 674 aaPredicted RBP18.78■□□□□ 0.6
KLHL9-201ENST00000359039 ANP32AP39687 249 aaKnown RBP18.78■□□□□ 0.6
KLHL9-201ENST00000359039 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.6
KLHL9-201ENST00000359039 KCNH8Q96L42 1107 aa18.77■□□□□ 0.59
KLHL9-201ENST00000359039 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.59
KLHL9-201ENST00000359039 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
KLHL9-201ENST00000359039 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
KLHL9-201ENST00000359039 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
KLHL9-201ENST00000359039 UPF2Q9HAU5 1272 aaKnown RBP18.72■□□□□ 0.59
KLHL9-201ENST00000359039 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
KLHL9-201ENST00000359039 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
KLHL9-201ENST00000359039 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
KLHL9-201ENST00000359039 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
KLHL9-201ENST00000359039 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
KLHL9-201ENST00000359039 ANP32BQ92688 251 aaKnown RBP18.65■□□□□ 0.58
KLHL9-201ENST00000359039 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
KLHL9-201ENST00000359039 PLEKHD1A6NEE1 506 aa18.63■□□□□ 0.57
KLHL9-201ENST00000359039 FKBP8Q14318 412 aa18.55■□□□□ 0.56
KLHL9-201ENST00000359039 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
KLHL9-201ENST00000359039 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
KLHL9-201ENST00000359039 MRS2Q9HD23 443 aa18.53■□□□□ 0.56
KLHL9-201ENST00000359039 ARXQ96QS3 562 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms