RNA–Protein interactions for RNA: ENST00000358139.6

PDE1A-202, Transcript of phosphodiesterase 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDE1A, Length 2,015 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-202ENST00000358139 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
PDE1A-202ENST00000358139 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
PDE1A-202ENST00000358139 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
PDE1A-202ENST00000358139 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
PDE1A-202ENST00000358139 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
PDE1A-202ENST00000358139 FOXD1Q16676 465 aa13.15□□□□□ -0.3
PDE1A-202ENST00000358139 ADRA2BP18089 450 aa13.01□□□□□ -0.33
PDE1A-202ENST00000358139 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
PDE1A-202ENST00000358139 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
PDE1A-202ENST00000358139 KCNA4P22459 653 aa12.47□□□□□ -0.41
PDE1A-202ENST00000358139 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.45
PDE1A-202ENST00000358139 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
PDE1A-202ENST00000358139 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
PDE1A-202ENST00000358139 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
PDE1A-202ENST00000358139 MSH5O43196 834 aa11.93□□□□□ -0.5
PDE1A-202ENST00000358139 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
PDE1A-202ENST00000358139 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
PDE1A-202ENST00000358139 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
PDE1A-202ENST00000358139 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
PDE1A-202ENST00000358139 MAPK8IP2Q13387 824 aaPredicted RBP11.69□□□□□ -0.54
PDE1A-202ENST00000358139 ZBTB22O15209 634 aa11.49□□□□□ -0.57
PDE1A-202ENST00000358139 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
PDE1A-202ENST00000358139 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
PDE1A-202ENST00000358139 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.59
PDE1A-202ENST00000358139 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
PDE1A-202ENST00000358139 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
PDE1A-202ENST00000358139 SLC4A2P04920 1241 aa11.14□□□□□ -0.63
PDE1A-202ENST00000358139 POTEDQ86YR6 584 aa10.98□□□□□ -0.65
PDE1A-202ENST00000358139 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.66
PDE1A-202ENST00000358139 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
PDE1A-202ENST00000358139 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
PDE1A-202ENST00000358139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.8□□□□□ -0.68
PDE1A-202ENST00000358139 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
PDE1A-202ENST00000358139 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
PDE1A-202ENST00000358139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
PDE1A-202ENST00000358139 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
PDE1A-202ENST00000358139 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
PDE1A-202ENST00000358139 FKBP8Q14318 412 aa10.6□□□□□ -0.71
PDE1A-202ENST00000358139 ZNF219Q9P2Y4 722 aaPredicted RBP10.43□□□□□ -0.74
PDE1A-202ENST00000358139 APLP2Q06481 763 aa10.41□□□□□ -0.74
PDE1A-202ENST00000358139 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
PDE1A-202ENST00000358139 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
PDE1A-202ENST00000358139 SPINK5Q9NQ38 1064 aaPredicted RBP10.29□□□□□ -0.76
PDE1A-202ENST00000358139 RNF39Q9H2S5 420 aa10.28□□□□□ -0.76
PDE1A-202ENST00000358139 TRHP20396 242 aaPredicted RBP10.27□□□□□ -0.77
PDE1A-202ENST00000358139 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
PDE1A-202ENST00000358139 CAPN15O75808 1086 aa10.21□□□□□ -0.78
PDE1A-202ENST00000358139 POLA2Q14181 598 aa10.19□□□□□ -0.78
PDE1A-202ENST00000358139 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
PDE1A-202ENST00000358139 C1QBPQ07021 282 aaKnown RBP10.16□□□□□ -0.78
PDE1A-202ENST00000358139 FBLN2P98095 1184 aa10.15□□□□□ -0.78
PDE1A-202ENST00000358139 ABCB7O75027 752 aa10.07□□□□□ -0.8
PDE1A-202ENST00000358139 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
PDE1A-202ENST00000358139 PROM2Q8N271 834 aa10.06□□□□□ -0.8
PDE1A-202ENST00000358139 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
PDE1A-202ENST00000358139 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
PDE1A-202ENST00000358139 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
PDE1A-202ENST00000358139 DSG3P32926 999 aa9.94□□□□□ -0.82
PDE1A-202ENST00000358139 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
PDE1A-202ENST00000358139 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
PDE1A-202ENST00000358139 ZNF692Q9BU19 519 aaPredicted RBP9.83□□□□□ -0.84
PDE1A-202ENST00000358139 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
PDE1A-202ENST00000358139 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
PDE1A-202ENST00000358139 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
PDE1A-202ENST00000358139 SSUH2Q9Y2M2 353 aa9.76□□□□□ -0.85
PDE1A-202ENST00000358139 CACNB1Q02641 598 aaPredicted RBP9.72□□□□□ -0.85
PDE1A-202ENST00000358139 PABPN1Q86U42 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
PDE1A-202ENST00000358139 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
PDE1A-202ENST00000358139 PKD2Q13563 968 aa9.68□□□□□ -0.86
PDE1A-202ENST00000358139 KLHL34Q8N239 644 aa9.68□□□□□ -0.86
PDE1A-202ENST00000358139 DCAF8L2P0C7V8 631 aa9.65□□□□□ -0.87
PDE1A-202ENST00000358139 PLCD3Q8N3E9 789 aa9.65□□□□□ -0.87
PDE1A-202ENST00000358139 SPOCK2Q92563 424 aa9.65□□□□□ -0.87
PDE1A-202ENST00000358139 MIER1Q8N108 512 aa9.61□□□□□ -0.87
PDE1A-202ENST00000358139 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
PDE1A-202ENST00000358139 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
PDE1A-202ENST00000358139 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
PDE1A-202ENST00000358139 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.89
PDE1A-202ENST00000358139 RGL2O15211 777 aa9.46□□□□□ -0.9
PDE1A-202ENST00000358139 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
PDE1A-202ENST00000358139 CIZ1Q9ULV3 898 aaPredicted RBP9.45□□□□□ -0.9
PDE1A-202ENST00000358139 NPM1P06748 294 aaKnown RBP eCLIP9.43□□□□□ -0.9
PDE1A-202ENST00000358139 RBM42Q9BTD8 480 aaKnown RBP9.42□□□□□ -0.9
PDE1A-202ENST00000358139 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
PDE1A-202ENST00000358139 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
PDE1A-202ENST00000358139 BBXQ8WY36 941 aaPredicted RBP9.39□□□□□ -0.91
PDE1A-202ENST00000358139 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
PDE1A-202ENST00000358139 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
PDE1A-202ENST00000358139 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
PDE1A-202ENST00000358139 REM2Q8IYK8 340 aaPredicted RBP9.33□□□□□ -0.92
PDE1A-202ENST00000358139 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
PDE1A-202ENST00000358139 NUBP1P53384 320 aa9.32□□□□□ -0.92
PDE1A-202ENST00000358139 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
PDE1A-202ENST00000358139 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
PDE1A-202ENST00000358139 CHGAP10645 457 aaKnown RBP9.31□□□□□ -0.92
PDE1A-202ENST00000358139 GSE1Q14687 1217 aa9.31□□□□□ -0.92
PDE1A-202ENST00000358139 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
PDE1A-202ENST00000358139 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
PDE1A-202ENST00000358139 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.92
PDE1A-202ENST00000358139 MNX1P50219 401 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms