RNA–Protein interactions for RNA: ENST00000357988.9

PHF8-204, Transcript of PHD finger protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF8, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-204ENST00000357988 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
PHF8-204ENST00000357988 NISCHQ9Y2I1 1504 aa18.41■□□□□ 0.54
PHF8-204ENST00000357988 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
PHF8-204ENST00000357988 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
PHF8-204ENST00000357988 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
PHF8-204ENST00000357988 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
PHF8-204ENST00000357988 APLP2Q06481 763 aa17.5■□□□□ 0.39
PHF8-204ENST00000357988 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
PHF8-204ENST00000357988 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
PHF8-204ENST00000357988 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
PHF8-204ENST00000357988 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
PHF8-204ENST00000357988 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
PHF8-204ENST00000357988 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
PHF8-204ENST00000357988 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
PHF8-204ENST00000357988 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
PHF8-204ENST00000357988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
PHF8-204ENST00000357988 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
PHF8-204ENST00000357988 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
PHF8-204ENST00000357988 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
PHF8-204ENST00000357988 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
PHF8-204ENST00000357988 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
PHF8-204ENST00000357988 ABCC9O60706 1549 aa16.41■□□□□ 0.22
PHF8-204ENST00000357988 ITGAEP38570 1179 aa16.39■□□□□ 0.21
PHF8-204ENST00000357988 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
PHF8-204ENST00000357988 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.2
PHF8-204ENST00000357988 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
PHF8-204ENST00000357988 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
PHF8-204ENST00000357988 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
PHF8-204ENST00000357988 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
PHF8-204ENST00000357988 NEFLP07196 543 aa16.14■□□□□ 0.17
PHF8-204ENST00000357988 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
PHF8-204ENST00000357988 MYT1Q01538 1121 aa16.12■□□□□ 0.17
PHF8-204ENST00000357988 FBLN2P98095 1184 aa16.11■□□□□ 0.17
PHF8-204ENST00000357988 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
PHF8-204ENST00000357988 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
PHF8-204ENST00000357988 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
PHF8-204ENST00000357988 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
PHF8-204ENST00000357988 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
PHF8-204ENST00000357988 BCANQ96GW7 911 aa15.79■□□□□ 0.12
PHF8-204ENST00000357988 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.11
PHF8-204ENST00000357988 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
PHF8-204ENST00000357988 ZNF326Q5BKZ1 582 aaKnown RBP15.73■□□□□ 0.11
PHF8-204ENST00000357988 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
PHF8-204ENST00000357988 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
PHF8-204ENST00000357988 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
PHF8-204ENST00000357988 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
PHF8-204ENST00000357988 HRCP23327 699 aa15.62■□□□□ 0.09
PHF8-204ENST00000357988 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
PHF8-204ENST00000357988 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
PHF8-204ENST00000357988 CLSPNQ9HAW4 1339 aa15.57■□□□□ 0.08
PHF8-204ENST00000357988 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
PHF8-204ENST00000357988 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
PHF8-204ENST00000357988 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
PHF8-204ENST00000357988 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
PHF8-204ENST00000357988 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
PHF8-204ENST00000357988 ZNF316A6NFI3 1004 aaPredicted RBP15.41■□□□□ 0.06
PHF8-204ENST00000357988 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
PHF8-204ENST00000357988 NEFMP07197 916 aa15.38■□□□□ 0.05
PHF8-204ENST00000357988 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
PHF8-204ENST00000357988 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
PHF8-204ENST00000357988 ANP32CO43423 234 aa15.34■□□□□ 0.05
PHF8-204ENST00000357988 CANXP27824 592 aaKnown RBP15.34■□□□□ 0.05
PHF8-204ENST00000357988 CHMP7Q8WUX9 453 aaPredicted RBP15.29■□□□□ 0.04
PHF8-204ENST00000357988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.041e-6■■■■□ 19.6
PHF8-204ENST00000357988 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
PHF8-204ENST00000357988 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
PHF8-204ENST00000357988 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
PHF8-204ENST00000357988 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
PHF8-204ENST00000357988 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
PHF8-204ENST00000357988 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
PHF8-204ENST00000357988 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
PHF8-204ENST00000357988 KCNH8Q96L42 1107 aa15.14■□□□□ 0.01
PHF8-204ENST00000357988 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
PHF8-204ENST00000357988 A0A0G2JS52 829 aa15.11■□□□□ 0.01
PHF8-204ENST00000357988 ZBTB7CA1YPR0 619 aa15.08■□□□□ 0.01
PHF8-204ENST00000357988 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
PHF8-204ENST00000357988 TSPY4P0CV99 314 aa15.08■□□□□ 0
PHF8-204ENST00000357988 TSPY10P0CW01 314 aa15.08■□□□□ 0
PHF8-204ENST00000357988 TONSLQ96HA7 1378 aa15.07■□□□□ 0
PHF8-204ENST00000357988 ERCC6Q03468 1493 aa15.07■□□□□ 0
PHF8-204ENST00000357988 KDM2AQ9Y2K7 1162 aa15.05■□□□□ -0
PHF8-204ENST00000357988 C14orf37Q86TY3 774 aa15.03■□□□□ -0
PHF8-204ENST00000357988 PPP1R15AO75807 674 aaPredicted RBP15.02■□□□□ -0
PHF8-204ENST00000357988 MTUS2Q5JR59 1369 aa15.02□□□□□ -0.01
PHF8-204ENST00000357988 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
PHF8-204ENST00000357988 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
PHF8-204ENST00000357988 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
PHF8-204ENST00000357988 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
PHF8-204ENST00000357988 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
PHF8-204ENST00000357988 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
PHF8-204ENST00000357988 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
PHF8-204ENST00000357988 NACADO15069 1562 aa14.87□□□□□ -0.03
PHF8-204ENST00000357988 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.033e-6■■■■□ 20.8
PHF8-204ENST00000357988 GTF3C3Q9Y5Q9 886 aa14.86□□□□□ -0.03
PHF8-204ENST00000357988 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
PHF8-204ENST00000357988 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
PHF8-204ENST00000357988 TMC1Q8TDI8 760 aa14.82□□□□□ -0.04
PHF8-204ENST00000357988 CLIP1P30622 1438 aa14.82□□□□□ -0.04
PHF8-204ENST00000357988 RGL3Q3MIN7 710 aa14.82□□□□□ -0.04
PHF8-204ENST00000357988 HNRNPUQ00839 825 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms