RNA–Protein interactions for RNA: ENST00000357796.7

NPIPB9-201, Transcript of nuclear pore complex interacting protein family member B9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPIPB9, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9-201ENST00000357796 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
NPIPB9-201ENST00000357796 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
NPIPB9-201ENST00000357796 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
NPIPB9-201ENST00000357796 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
NPIPB9-201ENST00000357796 FOXD1Q16676 465 aa16.14■□□□□ 0.17
NPIPB9-201ENST00000357796 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
NPIPB9-201ENST00000357796 MSH5O43196 834 aa15.05■□□□□ -0
NPIPB9-201ENST00000357796 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
NPIPB9-201ENST00000357796 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
NPIPB9-201ENST00000357796 ADRA2BP18089 450 aa14.98□□□□□ -0.01
NPIPB9-201ENST00000357796 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
NPIPB9-201ENST00000357796 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
NPIPB9-201ENST00000357796 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
NPIPB9-201ENST00000357796 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
NPIPB9-201ENST00000357796 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
NPIPB9-201ENST00000357796 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
NPIPB9-201ENST00000357796 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
NPIPB9-201ENST00000357796 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
NPIPB9-201ENST00000357796 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
NPIPB9-201ENST00000357796 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.34
NPIPB9-201ENST00000357796 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
NPIPB9-201ENST00000357796 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
NPIPB9-201ENST00000357796 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
NPIPB9-201ENST00000357796 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
NPIPB9-201ENST00000357796 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
NPIPB9-201ENST00000357796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
NPIPB9-201ENST00000357796 KCNA4P22459 653 aa12.28□□□□□ -0.44
NPIPB9-201ENST00000357796 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
NPIPB9-201ENST00000357796 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.47
NPIPB9-201ENST00000357796 CAPN15O75808 1086 aa12.08□□□□□ -0.48
NPIPB9-201ENST00000357796 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
NPIPB9-201ENST00000357796 DSG3P32926 999 aa12.04□□□□□ -0.48
NPIPB9-201ENST00000357796 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
NPIPB9-201ENST00000357796 ABCB7O75027 752 aa11.83□□□□□ -0.52
NPIPB9-201ENST00000357796 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.52
NPIPB9-201ENST00000357796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
NPIPB9-201ENST00000357796 APLP2Q06481 763 aa11.75□□□□□ -0.53
NPIPB9-201ENST00000357796 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
NPIPB9-201ENST00000357796 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
NPIPB9-201ENST00000357796 POTEHQ6S545 545 aa11.7□□□□□ -0.54
NPIPB9-201ENST00000357796 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
NPIPB9-201ENST00000357796 POLA2Q14181 598 aa11.52□□□□□ -0.56
NPIPB9-201ENST00000357796 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.56
NPIPB9-201ENST00000357796 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
NPIPB9-201ENST00000357796 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
NPIPB9-201ENST00000357796 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
NPIPB9-201ENST00000357796 ZBTB22O15209 634 aa11.32□□□□□ -0.6
NPIPB9-201ENST00000357796 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
NPIPB9-201ENST00000357796 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
NPIPB9-201ENST00000357796 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
NPIPB9-201ENST00000357796 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
NPIPB9-201ENST00000357796 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
NPIPB9-201ENST00000357796 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
NPIPB9-201ENST00000357796 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
NPIPB9-201ENST00000357796 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
NPIPB9-201ENST00000357796 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
NPIPB9-201ENST00000357796 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
NPIPB9-201ENST00000357796 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
NPIPB9-201ENST00000357796 FBLN2P98095 1184 aa10.89□□□□□ -0.67
NPIPB9-201ENST00000357796 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
NPIPB9-201ENST00000357796 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
NPIPB9-201ENST00000357796 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
NPIPB9-201ENST00000357796 HAX1O00165 279 aa10.82□□□□□ -0.68
NPIPB9-201ENST00000357796 EVX2Q03828 476 aa10.75□□□□□ -0.69
NPIPB9-201ENST00000357796 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
NPIPB9-201ENST00000357796 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
NPIPB9-201ENST00000357796 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
NPIPB9-201ENST00000357796 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
NPIPB9-201ENST00000357796 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
NPIPB9-201ENST00000357796 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
NPIPB9-201ENST00000357796 NISCHQ9Y2I1 1504 aa10.66□□□□□ -0.7
NPIPB9-201ENST00000357796 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
NPIPB9-201ENST00000357796 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
NPIPB9-201ENST00000357796 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
NPIPB9-201ENST00000357796 PRR29P0C7W0 189 aa10.52□□□□□ -0.73
NPIPB9-201ENST00000357796 EHMT2Q96KQ7 1210 aa10.48□□□□□ -0.73
NPIPB9-201ENST00000357796 GABBR2O75899 941 aa10.44□□□□□ -0.74
NPIPB9-201ENST00000357796 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
NPIPB9-201ENST00000357796 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
NPIPB9-201ENST00000357796 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
NPIPB9-201ENST00000357796 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
NPIPB9-201ENST00000357796 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
NPIPB9-201ENST00000357796 LHX8Q68G74 356 aa10.23□□□□□ -0.77
NPIPB9-201ENST00000357796 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
NPIPB9-201ENST00000357796 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
NPIPB9-201ENST00000357796 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
NPIPB9-201ENST00000357796 GALR2O43603 387 aaPredicted RBP10.1□□□□□ -0.79
NPIPB9-201ENST00000357796 CLCN6P51797 869 aa10.1□□□□□ -0.79
NPIPB9-201ENST00000357796 DCBLD2Q96PD2 775 aa10.1□□□□□ -0.79
NPIPB9-201ENST00000357796 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
NPIPB9-201ENST00000357796 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
NPIPB9-201ENST00000357796 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
NPIPB9-201ENST00000357796 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPIPB9-201ENST00000357796 PROM2Q8N271 834 aa9.99□□□□□ -0.81
NPIPB9-201ENST00000357796 POTEB2H3BUK9 544 aa9.94□□□□□ -0.82
NPIPB9-201ENST00000357796 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
NPIPB9-201ENST00000357796 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
NPIPB9-201ENST00000357796 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
NPIPB9-201ENST00000357796 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
NPIPB9-201ENST00000357796 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms