RNA–Protein interactions for RNA: ENST00000357328.8

ZNF248-201, Transcript of zinc finger protein 248, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF248, Length 4,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-201ENST00000357328 NISCHQ9Y2I1 1504 aa13.57□□□□□ -0.24
ZNF248-201ENST00000357328 CCDC180Q9P1Z9 1646 aa12.06□□□□□ -0.48
ZNF248-201ENST00000357328 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
ZNF248-201ENST00000357328 DCAF1Q9Y4B6 1507 aa11.56□□□□□ -0.56
ZNF248-201ENST00000357328 MYO15BQ96JP2 1530 aa11.38□□□□□ -0.59
ZNF248-201ENST00000357328 NACADO15069 1562 aa10.93□□□□□ -0.66
ZNF248-201ENST00000357328 ABCC9O60706 1549 aa10.92□□□□□ -0.66
ZNF248-201ENST00000357328 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
ZNF248-201ENST00000357328 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
ZNF248-201ENST00000357328 RB1CC1Q8TDY2 1594 aa10.66□□□□□ -0.7
ZNF248-201ENST00000357328 SCRIBQ14160 1630 aa10.59□□□□□ -0.71
ZNF248-201ENST00000357328 PEG3Q9GZU2 1588 aa10.58□□□□□ -0.72
ZNF248-201ENST00000357328 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
ZNF248-201ENST00000357328 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
ZNF248-201ENST00000357328 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
ZNF248-201ENST00000357328 RSF1Q96T23 1441 aaPredicted RBP10.49□□□□□ -0.73
ZNF248-201ENST00000357328 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
ZNF248-201ENST00000357328 MROH2BQ7Z745 1585 aa10.41□□□□□ -0.74
ZNF248-201ENST00000357328 WIZO95785 1651 aa10.38□□□□□ -0.75
ZNF248-201ENST00000357328 TOP2AP11388 1531 aaKnown RBP10.36□□□□□ -0.75
ZNF248-201ENST00000357328 CECR2Q9BXF3 1484 aa10.34□□□□□ -0.75
ZNF248-201ENST00000357328 SMARCA2P51531 1590 aa10.28□□□□□ -0.76
ZNF248-201ENST00000357328 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
ZNF248-201ENST00000357328 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
ZNF248-201ENST00000357328 CHIC1Q5VXU3 224 aa10.14□□□□□ -0.79
ZNF248-201ENST00000357328 BIVM-ERCC5R4GMW8 1640 aa10.08□□□□□ -0.8
ZNF248-201ENST00000357328 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
ZNF248-201ENST00000357328 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
ZNF248-201ENST00000357328 NCAPD3P42695 1498 aa10.02□□□□□ -0.8
ZNF248-201ENST00000357328 SUPT5HO00267 1087 aaKnown RBP9.98□□□□□ -0.81
ZNF248-201ENST00000357328 TOP2BQ02880 1626 aa9.96□□□□□ -0.82
ZNF248-201ENST00000357328 KIF21BO75037 1637 aa9.93□□□□□ -0.82
ZNF248-201ENST00000357328 SYNJ1O43426 1573 aa9.93□□□□□ -0.82
ZNF248-201ENST00000357328 DCAF8L2P0C7V8 631 aa9.88□□□□□ -0.83
ZNF248-201ENST00000357328 WDR97A6NE52 1622 aa9.86□□□□□ -0.83
ZNF248-201ENST00000357328 ABCC8Q09428 1581 aa9.86□□□□□ -0.83
ZNF248-201ENST00000357328 BAZ1BQ9UIG0 1483 aaKnown RBP9.85□□□□□ -0.83
ZNF248-201ENST00000357328 EEA1Q15075 1411 aa9.85□□□□□ -0.83
ZNF248-201ENST00000357328 CFTRP13569 1480 aa9.85□□□□□ -0.83
ZNF248-201ENST00000357328 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
ZNF248-201ENST00000357328 ERICH3Q5RHP9 1530 aa9.78□□□□□ -0.84
ZNF248-201ENST00000357328 CC2D2AQ9P2K1 1620 aa9.77□□□□□ -0.85
ZNF248-201ENST00000357328 CUX1P39880 1505 aa9.76□□□□□ -0.85
ZNF248-201ENST00000357328 PRXQ9BXM0 1461 aa9.7□□□□□ -0.86
ZNF248-201ENST00000357328 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
ZNF248-201ENST00000357328 RUSC2Q8N2Y8 1516 aa9.65□□□□□ -0.86
ZNF248-201ENST00000357328 TNIKQ9UKE5 1360 aa9.65□□□□□ -0.86
ZNF248-201ENST00000357328 SOGA1O94964 1423 aa9.64□□□□□ -0.87
ZNF248-201ENST00000357328 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
ZNF248-201ENST00000357328 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
ZNF248-201ENST00000357328 CEP164Q9UPV0 1460 aa9.61□□□□□ -0.87
ZNF248-201ENST00000357328 GOLGA3Q08378 1498 aa9.6□□□□□ -0.87
ZNF248-201ENST00000357328 CUL7Q14999 1698 aa9.59□□□□□ -0.87
ZNF248-201ENST00000357328 TARBP1Q13395 1621 aaKnown RBP9.58□□□□□ -0.88
ZNF248-201ENST00000357328 PABPN1Q86U42 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
ZNF248-201ENST00000357328 CTTNBP2Q8WZ74 1663 aa9.56□□□□□ -0.88
ZNF248-201ENST00000357328 MAP3K1Q13233 1512 aa9.56□□□□□ -0.88
ZNF248-201ENST00000357328 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
ZNF248-201ENST00000357328 KIF21AQ7Z4S6 1674 aa9.56□□□□□ -0.88
ZNF248-201ENST00000357328 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
ZNF248-201ENST00000357328 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
ZNF248-201ENST00000357328 TRIM41Q8WV44 630 aa9.52□□□□□ -0.88
ZNF248-201ENST00000357328 CEP162Q5TB80 1403 aa9.52□□□□□ -0.89
ZNF248-201ENST00000357328 SAMD9Q5K651 1589 aa9.51□□□□□ -0.89
ZNF248-201ENST00000357328 ARAP1Q96P48 1450 aa9.5□□□□□ -0.89
ZNF248-201ENST00000357328 RAPGEF2Q9Y4G8 1499 aa9.5□□□□□ -0.89
ZNF248-201ENST00000357328 LRRIQ1Q96JM4 1722 aa9.49□□□□□ -0.89
ZNF248-201ENST00000357328 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
ZNF248-201ENST00000357328 LOC105371045A0A1W2PR82 267 aa9.49□□□□□ -0.89
ZNF248-201ENST00000357328 PBRM1Q86U86 1689 aa9.49□□□□□ -0.89
ZNF248-201ENST00000357328 URB2Q14146 1524 aaKnown RBP9.47□□□□□ -0.89
ZNF248-201ENST00000357328 CUX2O14529 1486 aa9.46□□□□□ -0.89
ZNF248-201ENST00000357328 WDR62O43379 1518 aa9.46□□□□□ -0.9
ZNF248-201ENST00000357328 FGD5Q6ZNL6 1462 aa9.46□□□□□ -0.9
ZNF248-201ENST00000357328 FANCD2Q9BXW9 1451 aa9.45□□□□□ -0.9
ZNF248-201ENST00000357328 THOC2Q8NI27 1593 aaKnown RBP9.45□□□□□ -0.9
ZNF248-201ENST00000357328 POLA1P09884 1462 aaPredicted RBP9.44□□□□□ -0.9
ZNF248-201ENST00000357328 VPS8Q8N3P4 1428 aa9.43□□□□□ -0.9
ZNF248-201ENST00000357328 EFCAB5A4FU69 1503 aa9.42□□□□□ -0.9
ZNF248-201ENST00000357328 AQRO60306 1485 aaKnown RBP eCLIP9.42□□□□□ -0.9
ZNF248-201ENST00000357328 HRCP23327 699 aa9.41□□□□□ -0.9
ZNF248-201ENST00000357328 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
ZNF248-201ENST00000357328 KIF27Q86VH2 1401 aa9.4□□□□□ -0.91
ZNF248-201ENST00000357328 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
ZNF248-201ENST00000357328 CLIP1P30622 1438 aa9.39□□□□□ -0.91
ZNF248-201ENST00000357328 IGF1RP08069 1367 aa9.38□□□□□ -0.91
ZNF248-201ENST00000357328 ADAMTS12P58397 1594 aa9.38□□□□□ -0.91
ZNF248-201ENST00000357328 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
ZNF248-201ENST00000357328 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
ZNF248-201ENST00000357328 TIAM1Q13009 1591 aa9.35□□□□□ -0.91
ZNF248-201ENST00000357328 NESP48681 1621 aa9.35□□□□□ -0.91
ZNF248-201ENST00000357328 AEBP2Q6ZN18 517 aaPredicted RBP9.35□□□□□ -0.91
ZNF248-201ENST00000357328 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
ZNF248-201ENST00000357328 RRBP1Q9P2E9 1410 aaKnown RBP9.34□□□□□ -0.91
ZNF248-201ENST00000357328 PCF11O94913 1555 aaKnown RBP9.3□□□□□ -0.92
ZNF248-201ENST00000357328 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
ZNF248-201ENST00000357328 UGGT2Q9NYU1 1516 aa9.28□□□□□ -0.92
ZNF248-201ENST00000357328 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
ZNF248-201ENST00000357328 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
ZNF248-201ENST00000357328 ADCY10Q96PN6 1610 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms