RNA–Protein interactions for RNA: ENST00000357037.5

CAVIN1-201, Transcript of caveolae associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN1-201ENST00000357037 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
CAVIN1-201ENST00000357037 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
CAVIN1-201ENST00000357037 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
CAVIN1-201ENST00000357037 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
CAVIN1-201ENST00000357037 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
CAVIN1-201ENST00000357037 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
CAVIN1-201ENST00000357037 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
CAVIN1-201ENST00000357037 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
CAVIN1-201ENST00000357037 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.55
CAVIN1-201ENST00000357037 ABCC9O60706 1549 aa24.57■■□□□ 1.52
CAVIN1-201ENST00000357037 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
CAVIN1-201ENST00000357037 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
CAVIN1-201ENST00000357037 TRIM41Q8WV44 630 aa24.39■■□□□ 1.5
CAVIN1-201ENST00000357037 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
CAVIN1-201ENST00000357037 MYO15BQ96JP2 1530 aa24.12■■□□□ 1.45
CAVIN1-201ENST00000357037 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
CAVIN1-201ENST00000357037 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
CAVIN1-201ENST00000357037 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
CAVIN1-201ENST00000357037 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
CAVIN1-201ENST00000357037 HRCP23327 699 aa23.81■■□□□ 1.4
CAVIN1-201ENST00000357037 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
CAVIN1-201ENST00000357037 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
CAVIN1-201ENST00000357037 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
CAVIN1-201ENST00000357037 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
CAVIN1-201ENST00000357037 UBTFP17480 764 aaKnown RBP23.57■■□□□ 1.36
CAVIN1-201ENST00000357037 NACADO15069 1562 aa23.4■■□□□ 1.34
CAVIN1-201ENST00000357037 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
CAVIN1-201ENST00000357037 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
CAVIN1-201ENST00000357037 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
CAVIN1-201ENST00000357037 APLP2Q06481 763 aa23.22■■□□□ 1.31
CAVIN1-201ENST00000357037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
CAVIN1-201ENST00000357037 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
CAVIN1-201ENST00000357037 WIZO95785 1651 aa23.09■■□□□ 1.29
CAVIN1-201ENST00000357037 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
CAVIN1-201ENST00000357037 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
CAVIN1-201ENST00000357037 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
CAVIN1-201ENST00000357037 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
CAVIN1-201ENST00000357037 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
CAVIN1-201ENST00000357037 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
CAVIN1-201ENST00000357037 SOGA1O94964 1423 aa22.76■■□□□ 1.23
CAVIN1-201ENST00000357037 ITGAEP38570 1179 aa22.73■■□□□ 1.23
CAVIN1-201ENST00000357037 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
CAVIN1-201ENST00000357037 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
CAVIN1-201ENST00000357037 CEP162Q5TB80 1403 aa22.6■■□□□ 1.21
CAVIN1-201ENST00000357037 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
CAVIN1-201ENST00000357037 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
CAVIN1-201ENST00000357037 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
CAVIN1-201ENST00000357037 YTHDC1Q96MU7 727 aaKnown RBP22.53■■□□□ 1.2
CAVIN1-201ENST00000357037 P3H3Q8IVL6 736 aa22.45■■□□□ 1.18
CAVIN1-201ENST00000357037 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
CAVIN1-201ENST00000357037 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
CAVIN1-201ENST00000357037 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
CAVIN1-201ENST00000357037 CLIP1P30622 1438 aa22.38■■□□□ 1.17
CAVIN1-201ENST00000357037 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
CAVIN1-201ENST00000357037 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
CAVIN1-201ENST00000357037 EEA1Q15075 1411 aa22.32■■□□□ 1.16
CAVIN1-201ENST00000357037 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
CAVIN1-201ENST00000357037 FAM50AQ14320 339 aaKnown RBP22.23■■□□□ 1.15
CAVIN1-201ENST00000357037 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
CAVIN1-201ENST00000357037 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
CAVIN1-201ENST00000357037 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
CAVIN1-201ENST00000357037 ZNF316A6NFI3 1004 aaPredicted RBP22.12■■□□□ 1.13
CAVIN1-201ENST00000357037 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
CAVIN1-201ENST00000357037 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
CAVIN1-201ENST00000357037 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
CAVIN1-201ENST00000357037 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
CAVIN1-201ENST00000357037 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
CAVIN1-201ENST00000357037 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
CAVIN1-201ENST00000357037 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.11
CAVIN1-201ENST00000357037 CUX2O14529 1486 aa21.94■■□□□ 1.1
CAVIN1-201ENST00000357037 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
CAVIN1-201ENST00000357037 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.1
CAVIN1-201ENST00000357037 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
CAVIN1-201ENST00000357037 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
CAVIN1-201ENST00000357037 MIER1Q8N108 512 aa21.83■■□□□ 1.08
CAVIN1-201ENST00000357037 FBLN2P98095 1184 aa21.82■■□□□ 1.08
CAVIN1-201ENST00000357037 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
CAVIN1-201ENST00000357037 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
CAVIN1-201ENST00000357037 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
CAVIN1-201ENST00000357037 TRIM52Q96A61 297 aa21.71■■□□□ 1.07
CAVIN1-201ENST00000357037 HIRIP3Q9BW71 556 aaPredicted RBP21.7■■□□□ 1.06
CAVIN1-201ENST00000357037 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
CAVIN1-201ENST00000357037 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
CAVIN1-201ENST00000357037 CNGB1Q14028 1251 aaPredicted RBP21.67■■□□□ 1.06
CAVIN1-201ENST00000357037 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
CAVIN1-201ENST00000357037 KIF21BO75037 1637 aa21.65■■□□□ 1.06
CAVIN1-201ENST00000357037 CUX1P39880 1505 aa21.63■■□□□ 1.05
CAVIN1-201ENST00000357037 CCNB3Q8WWL7 1395 aa21.63■■□□□ 1.05
CAVIN1-201ENST00000357037 IGF1RP08069 1367 aa21.63■■□□□ 1.05
CAVIN1-201ENST00000357037 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
CAVIN1-201ENST00000357037 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
CAVIN1-201ENST00000357037 CFTRP13569 1480 aa21.61■■□□□ 1.05
CAVIN1-201ENST00000357037 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
CAVIN1-201ENST00000357037 MTUS2Q5JR59 1369 aa21.59■■□□□ 1.05
CAVIN1-201ENST00000357037 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
CAVIN1-201ENST00000357037 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
CAVIN1-201ENST00000357037 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
CAVIN1-201ENST00000357037 FANCD2Q9BXW9 1451 aa21.57■■□□□ 1.04
CAVIN1-201ENST00000357037 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
CAVIN1-201ENST00000357037 DDX10Q13206 875 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms