RNA–Protein interactions for RNA: ENST00000355867.8

SVIL-201, Transcript of supervillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SVIL, Length 7,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-201ENST00000355867 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
SVIL-201ENST00000355867 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
SVIL-201ENST00000355867 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
SVIL-201ENST00000355867 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
SVIL-201ENST00000355867 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
SVIL-201ENST00000355867 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
SVIL-201ENST00000355867 APLP2Q06481 763 aa17■□□□□ 0.31
SVIL-201ENST00000355867 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
SVIL-201ENST00000355867 MYT1Q01538 1121 aa16.86■□□□□ 0.29
SVIL-201ENST00000355867 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
SVIL-201ENST00000355867 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
SVIL-201ENST00000355867 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
SVIL-201ENST00000355867 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
SVIL-201ENST00000355867 ATP1B4Q9UN42 357 aaPredicted RBP16.54■□□□□ 0.24
SVIL-201ENST00000355867 NEFLP07196 543 aa16.54■□□□□ 0.24
SVIL-201ENST00000355867 RANGAP1P46060 587 aaPredicted RBP16.53■□□□□ 0.24
SVIL-201ENST00000355867 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
SVIL-201ENST00000355867 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
SVIL-201ENST00000355867 POLR3GLQ9BT43 218 aa16.14■□□□□ 0.17
SVIL-201ENST00000355867 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
SVIL-201ENST00000355867 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.17
SVIL-201ENST00000355867 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
SVIL-201ENST00000355867 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
SVIL-201ENST00000355867 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
SVIL-201ENST00000355867 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
SVIL-201ENST00000355867 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
SVIL-201ENST00000355867 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
SVIL-201ENST00000355867 RTL5Q5HYW3 569 aaPredicted RBP15.88■□□□□ 0.13
SVIL-201ENST00000355867 PPARGC1BQ86YN6 1023 aaKnown RBP15.78■□□□□ 0.12
SVIL-201ENST00000355867 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
SVIL-201ENST00000355867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
SVIL-201ENST00000355867 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
SVIL-201ENST00000355867 ITGAEP38570 1179 aa15.73■□□□□ 0.11
SVIL-201ENST00000355867 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
SVIL-201ENST00000355867 SLC24A1O60721 1099 aa15.64■□□□□ 0.09
SVIL-201ENST00000355867 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
SVIL-201ENST00000355867 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
SVIL-201ENST00000355867 BCANQ96GW7 911 aa15.33■□□□□ 0.04
SVIL-201ENST00000355867 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
SVIL-201ENST00000355867 HRCP23327 699 aa15.29■□□□□ 0.04
SVIL-201ENST00000355867 TRIM26Q12899 539 aaPredicted RBP15.27■□□□□ 0.03
SVIL-201ENST00000355867 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
SVIL-201ENST00000355867 ANP32BQ92688 251 aaKnown RBP15.22■□□□□ 0.03
SVIL-201ENST00000355867 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
SVIL-201ENST00000355867 NEFMP07197 916 aa15.18■□□□□ 0.02
SVIL-201ENST00000355867 NISCHQ9Y2I1 1504 aa15.16■□□□□ 0.02
SVIL-201ENST00000355867 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
SVIL-201ENST00000355867 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
SVIL-201ENST00000355867 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
SVIL-201ENST00000355867 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
SVIL-201ENST00000355867 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
SVIL-201ENST00000355867 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
SVIL-201ENST00000355867 CDK11BP21127 795 aaKnown RBP15.09■□□□□ 0.01
SVIL-201ENST00000355867 ANP32AP39687 249 aaKnown RBP15.08■□□□□ 0
SVIL-201ENST00000355867 GLIPR1L2Q4G1C9 344 aa15.07■□□□□ 0
SVIL-201ENST00000355867 ANP32CO43423 234 aa15.04■□□□□ -0
SVIL-201ENST00000355867 ARXQ96QS3 562 aa14.99□□□□□ -0.01
SVIL-201ENST00000355867 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
SVIL-201ENST00000355867 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
SVIL-201ENST00000355867 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
SVIL-201ENST00000355867 UPF2Q9HAU5 1272 aaKnown RBP14.89□□□□□ -0.03
SVIL-201ENST00000355867 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
SVIL-201ENST00000355867 A0A0G2JS52 829 aa14.86□□□□□ -0.03
SVIL-201ENST00000355867 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
SVIL-201ENST00000355867 NBR1Q14596 966 aa14.79□□□□□ -0.04
SVIL-201ENST00000355867 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
SVIL-201ENST00000355867 FBLN2P98095 1184 aa14.76□□□□□ -0.05
SVIL-201ENST00000355867 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
SVIL-201ENST00000355867 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
SVIL-201ENST00000355867 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.06
SVIL-201ENST00000355867 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
SVIL-201ENST00000355867 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
SVIL-201ENST00000355867 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
SVIL-201ENST00000355867 ARID3CA6NKF2 412 aa14.63□□□□□ -0.07
SVIL-201ENST00000355867 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
SVIL-201ENST00000355867 FKBP8Q14318 412 aa14.62□□□□□ -0.07
SVIL-201ENST00000355867 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
SVIL-201ENST00000355867 ZBTB7CA1YPR0 619 aa14.6□□□□□ -0.07
SVIL-201ENST00000355867 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
SVIL-201ENST00000355867 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.58□□□□□ -0.07
SVIL-201ENST00000355867 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.07
SVIL-201ENST00000355867 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
SVIL-201ENST00000355867 DNTTIP2Q5QJE6 756 aaKnown RBP14.57□□□□□ -0.08
SVIL-201ENST00000355867 MYH16Q9H6N6 1097 aa14.56□□□□□ -0.08
SVIL-201ENST00000355867 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
SVIL-201ENST00000355867 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
SVIL-201ENST00000355867 PTMAP06454 111 aaKnown RBP14.53□□□□□ -0.08
SVIL-201ENST00000355867 AMER1Q5JTC6 1135 aaPredicted RBP14.51□□□□□ -0.09
SVIL-201ENST00000355867 CCDC136Q96JN2 1154 aa14.51□□□□□ -0.09
SVIL-201ENST00000355867 HNRNPUQ00839 825 aaKnown RBP eCLIP14.49□□□□□ -0.09
SVIL-201ENST00000355867 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
SVIL-201ENST00000355867 WDR43Q15061 677 aaKnown RBP eCLIP14.46□□□□□ -0.09
SVIL-201ENST00000355867 P3H3Q8IVL6 736 aa14.46□□□□□ -0.1
SVIL-201ENST00000355867 CLSTN1O94985 981 aa14.45□□□□□ -0.1
SVIL-201ENST00000355867 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
SVIL-201ENST00000355867 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
SVIL-201ENST00000355867 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
SVIL-201ENST00000355867 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
SVIL-201ENST00000355867 NPHP1O15259 732 aa14.4□□□□□ -0.1
SVIL-201ENST00000355867 BECN1Q14457 450 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms