RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
PCNX3-201ENST00000355703 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
PCNX3-201ENST00000355703 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
PCNX3-201ENST00000355703 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
PCNX3-201ENST00000355703 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
PCNX3-201ENST00000355703 ERICH6Q7L0X2 663 aa25.17■■□□□ 1.62
PCNX3-201ENST00000355703 APLP2Q06481 763 aa24.96■■□□□ 1.59
PCNX3-201ENST00000355703 FAM9AQ8IZU1 332 aaPredicted RBP24.92■■□□□ 1.58
PCNX3-201ENST00000355703 RANGAP1P46060 587 aaPredicted RBP24.91■■□□□ 1.58
PCNX3-201ENST00000355703 MYT1Q01538 1121 aa24.8■■□□□ 1.56
PCNX3-201ENST00000355703 ATP1B4Q9UN42 357 aaPredicted RBP24.8■■□□□ 1.56
PCNX3-201ENST00000355703 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
PCNX3-201ENST00000355703 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
PCNX3-201ENST00000355703 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
PCNX3-201ENST00000355703 MYT1LQ9UL68 1186 aa24.37■■□□□ 1.49
PCNX3-201ENST00000355703 PCGF6Q9BYE7 350 aa24.2■■□□□ 1.47
PCNX3-201ENST00000355703 CNGB1Q14028 1251 aaPredicted RBP24.08■■□□□ 1.45
PCNX3-201ENST00000355703 POLR3GLQ9BT43 218 aa24.08■■□□□ 1.44
PCNX3-201ENST00000355703 YTHDC1Q96MU7 727 aaKnown RBP24.03■■□□□ 1.44
PCNX3-201ENST00000355703 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
PCNX3-201ENST00000355703 DAXXQ9UER7 740 aaPredicted RBP23.94■■□□□ 1.42
PCNX3-201ENST00000355703 NEFLP07196 543 aa23.91■■□□□ 1.42
PCNX3-201ENST00000355703 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.39
PCNX3-201ENST00000355703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
PCNX3-201ENST00000355703 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
PCNX3-201ENST00000355703 BCL11AQ9H165 835 aa23.57■■□□□ 1.36
PCNX3-201ENST00000355703 SLC24A1O60721 1099 aa23.52■■□□□ 1.36
PCNX3-201ENST00000355703 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
PCNX3-201ENST00000355703 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
PCNX3-201ENST00000355703 ITGAEP38570 1179 aa23.4■■□□□ 1.34
PCNX3-201ENST00000355703 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.33
PCNX3-201ENST00000355703 ZNF316A6NFI3 1004 aaPredicted RBP23.29■■□□□ 1.32
PCNX3-201ENST00000355703 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
PCNX3-201ENST00000355703 BCANQ96GW7 911 aa23.03■■□□□ 1.28
PCNX3-201ENST00000355703 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
PCNX3-201ENST00000355703 ZBTB47Q9UFB7 747 aaPredicted RBP22.89■■□□□ 1.25
PCNX3-201ENST00000355703 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
PCNX3-201ENST00000355703 ZEB1P37275 1124 aaPredicted RBP22.75■■□□□ 1.23
PCNX3-201ENST00000355703 A0A0G2JS52 829 aa22.64■■□□□ 1.22
PCNX3-201ENST00000355703 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
PCNX3-201ENST00000355703 CANXP27824 592 aaKnown RBP22.54■■□□□ 1.2
PCNX3-201ENST00000355703 TRIM52Q96A61 297 aa22.48■■□□□ 1.19
PCNX3-201ENST00000355703 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
PCNX3-201ENST00000355703 TULP1O00294 542 aaPredicted RBP22.46■■□□□ 1.19
PCNX3-201ENST00000355703 PLEKHG5O94827 1062 aa22.43■■□□□ 1.18
PCNX3-201ENST00000355703 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
PCNX3-201ENST00000355703 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
PCNX3-201ENST00000355703 FBLN2P98095 1184 aa22.34■■□□□ 1.17
PCNX3-201ENST00000355703 NEFMP07197 916 aa22.31■■□□□ 1.16
PCNX3-201ENST00000355703 NEUROD1Q13562 356 aa22.31■■□□□ 1.16
PCNX3-201ENST00000355703 CDK11BP21127 795 aaKnown RBP22.21■■□□□ 1.15
PCNX3-201ENST00000355703 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
PCNX3-201ENST00000355703 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
PCNX3-201ENST00000355703 ESF1Q9H501 851 aaKnown RBP22.15■■□□□ 1.14
PCNX3-201ENST00000355703 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.13
PCNX3-201ENST00000355703 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
PCNX3-201ENST00000355703 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
PCNX3-201ENST00000355703 EIF5BO60841 1220 aaKnown RBP22.09■■□□□ 1.13
PCNX3-201ENST00000355703 ARXQ96QS3 562 aa22.07■■□□□ 1.12
PCNX3-201ENST00000355703 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
PCNX3-201ENST00000355703 HSP90AA1P07900 732 aaKnown RBP22.06■■□□□ 1.12
PCNX3-201ENST00000355703 CHGAP10645 457 aaKnown RBP22.02■■□□□ 1.12
PCNX3-201ENST00000355703 ANP32BQ92688 251 aaKnown RBP21.94■■□□□ 1.1
PCNX3-201ENST00000355703 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
PCNX3-201ENST00000355703 TAOK2Q9UL54 1235 aa21.86■■□□□ 1.09
PCNX3-201ENST00000355703 HRCP23327 699 aa21.83■■□□□ 1.09
PCNX3-201ENST00000355703 C14orf37Q86TY3 774 aa21.81■■□□□ 1.08
PCNX3-201ENST00000355703 TPRNQ4KMQ1 711 aa21.8■■□□□ 1.08
PCNX3-201ENST00000355703 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
PCNX3-201ENST00000355703 SALL2Q9Y467 1007 aaPredicted RBP21.77■■□□□ 1.08
PCNX3-201ENST00000355703 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
PCNX3-201ENST00000355703 ANP32CO43423 234 aa21.75■■□□□ 1.07
PCNX3-201ENST00000355703 HAP1P54257 671 aaPredicted RBP21.7■■□□□ 1.06
PCNX3-201ENST00000355703 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
PCNX3-201ENST00000355703 NPHP1O15259 732 aa21.66■■□□□ 1.06
PCNX3-201ENST00000355703 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
PCNX3-201ENST00000355703 ANP32AP39687 249 aaKnown RBP21.64■■□□□ 1.06
PCNX3-201ENST00000355703 CLSTN1O94985 981 aa21.64■■□□□ 1.05
PCNX3-201ENST00000355703 P3H3Q8IVL6 736 aa21.58■■□□□ 1.05
PCNX3-201ENST00000355703 PRM3Q9NNZ6 103 aa21.54■■□□□ 1.04
PCNX3-201ENST00000355703 UPF2Q9HAU5 1272 aaKnown RBP21.5■■□□□ 1.03
PCNX3-201ENST00000355703 AMER1Q5JTC6 1135 aaPredicted RBP21.45■■□□□ 1.02
PCNX3-201ENST00000355703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.021e-6■■■□□ 18.4
PCNX3-201ENST00000355703 NBR1Q14596 966 aa21.42■■□□□ 1.02
PCNX3-201ENST00000355703 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
PCNX3-201ENST00000355703 NPM1P06748 294 aaKnown RBP eCLIP21.34■■□□□ 1.01
PCNX3-201ENST00000355703 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
PCNX3-201ENST00000355703 LMOD2Q6P5Q4 547 aa21.33■■□□□ 1
PCNX3-201ENST00000355703 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1
PCNX3-201ENST00000355703 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
PCNX3-201ENST00000355703 NCLP19338 710 aaKnown RBP21.27■■□□□ 1
PCNX3-201ENST00000355703 GLIPR1L2Q4G1C9 344 aa21.27■■□□□ 1
PCNX3-201ENST00000355703 ANO8Q9HCE9 1232 aaPredicted RBP21.27■□□□□ 0.99
PCNX3-201ENST00000355703 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.26■□□□□ 0.99
PCNX3-201ENST00000355703 MYH16Q9H6N6 1097 aa21.25■□□□□ 0.99
PCNX3-201ENST00000355703 ZRSR1Q15695 479 aaKnown RBP21.25■□□□□ 0.99
PCNX3-201ENST00000355703 ARID4BQ4LE39 1312 aaPredicted RBP21.23■□□□□ 0.99
PCNX3-201ENST00000355703 KRI1Q8N9T8 703 aaKnown RBP21.21■□□□□ 0.99
PCNX3-201ENST00000355703 PDE4CQ08493 712 aa21.2■□□□□ 0.98
PCNX3-201ENST00000355703 NAP1L2Q9ULW6 460 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms