RNA–Protein interactions for RNA: ENST00000349223.9

NFATC3-203, Transcript of nuclear factor of activated T cells 3, humanhuman

TSL 1 (best) BASIC

Gene NFATC3, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFATC3-203ENST00000349223 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
NFATC3-203ENST00000349223 NISCHQ9Y2I1 1504 aa23.95■■□□□ 1.42
NFATC3-203ENST00000349223 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
NFATC3-203ENST00000349223 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
NFATC3-203ENST00000349223 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
NFATC3-203ENST00000349223 APLP2Q06481 763 aa22.57■■□□□ 1.2
NFATC3-203ENST00000349223 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
NFATC3-203ENST00000349223 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
NFATC3-203ENST00000349223 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.13
NFATC3-203ENST00000349223 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
NFATC3-203ENST00000349223 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
NFATC3-203ENST00000349223 ATP1B4Q9UN42 357 aaPredicted RBP21.93■■□□□ 1.1
NFATC3-203ENST00000349223 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
NFATC3-203ENST00000349223 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
NFATC3-203ENST00000349223 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
NFATC3-203ENST00000349223 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
NFATC3-203ENST00000349223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
NFATC3-203ENST00000349223 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
NFATC3-203ENST00000349223 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
NFATC3-203ENST00000349223 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
NFATC3-203ENST00000349223 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
NFATC3-203ENST00000349223 ITGAEP38570 1179 aa21.05■□□□□ 0.96
NFATC3-203ENST00000349223 ERICH6Q7L0X2 663 aa21.01■□□□□ 0.95
NFATC3-203ENST00000349223 ABCC9O60706 1549 aa21.01■□□□□ 0.95
NFATC3-203ENST00000349223 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
NFATC3-203ENST00000349223 NEFLP07196 543 aa20.94■□□□□ 0.94
NFATC3-203ENST00000349223 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
NFATC3-203ENST00000349223 TRIM26Q12899 539 aaPredicted RBP20.88■□□□□ 0.93
NFATC3-203ENST00000349223 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
NFATC3-203ENST00000349223 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
NFATC3-203ENST00000349223 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
NFATC3-203ENST00000349223 CNGB1Q14028 1251 aaPredicted RBP20.6■□□□□ 0.89
NFATC3-203ENST00000349223 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
NFATC3-203ENST00000349223 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
NFATC3-203ENST00000349223 FBLN2P98095 1184 aa20.54■□□□□ 0.88
NFATC3-203ENST00000349223 HRCP23327 699 aa20.46■□□□□ 0.87
NFATC3-203ENST00000349223 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
NFATC3-203ENST00000349223 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
NFATC3-203ENST00000349223 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
NFATC3-203ENST00000349223 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
NFATC3-203ENST00000349223 P3H3Q8IVL6 736 aa20.17■□□□□ 0.82
NFATC3-203ENST00000349223 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
NFATC3-203ENST00000349223 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
NFATC3-203ENST00000349223 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
NFATC3-203ENST00000349223 BCANQ96GW7 911 aa20.05■□□□□ 0.8
NFATC3-203ENST00000349223 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
NFATC3-203ENST00000349223 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
NFATC3-203ENST00000349223 ZNF777Q9ULD5 760 aaPredicted RBP20.03■□□□□ 0.8
NFATC3-203ENST00000349223 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
NFATC3-203ENST00000349223 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
NFATC3-203ENST00000349223 ANP32CO43423 234 aa19.9■□□□□ 0.78
NFATC3-203ENST00000349223 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
NFATC3-203ENST00000349223 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
NFATC3-203ENST00000349223 ZNF316A6NFI3 1004 aaPredicted RBP19.85■□□□□ 0.77
NFATC3-203ENST00000349223 NEFMP07197 916 aa19.8■□□□□ 0.76
NFATC3-203ENST00000349223 ZBTB47Q9UFB7 747 aaPredicted RBP19.8■□□□□ 0.76
NFATC3-203ENST00000349223 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
NFATC3-203ENST00000349223 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
NFATC3-203ENST00000349223 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
NFATC3-203ENST00000349223 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
NFATC3-203ENST00000349223 MYT1Q01538 1121 aa19.71■□□□□ 0.75
NFATC3-203ENST00000349223 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
NFATC3-203ENST00000349223 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
NFATC3-203ENST00000349223 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
NFATC3-203ENST00000349223 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.73
NFATC3-203ENST00000349223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.728e-8■□□□□ 8.4
NFATC3-203ENST00000349223 TONSLQ96HA7 1378 aa19.56■□□□□ 0.72
NFATC3-203ENST00000349223 CHIC2Q9UKJ5 165 aa19.55■□□□□ 0.72
NFATC3-203ENST00000349223 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
NFATC3-203ENST00000349223 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.72
NFATC3-203ENST00000349223 TSPY4P0CV99 314 aa19.52■□□□□ 0.71
NFATC3-203ENST00000349223 TSPY10P0CW01 314 aa19.52■□□□□ 0.71
NFATC3-203ENST00000349223 MTUS2Q5JR59 1369 aa19.45■□□□□ 0.7
NFATC3-203ENST00000349223 GTF3C3Q9Y5Q9 886 aa19.43■□□□□ 0.7
NFATC3-203ENST00000349223 KCNH8Q96L42 1107 aa19.38■□□□□ 0.69
NFATC3-203ENST00000349223 KDM2AQ9Y2K7 1162 aa19.35■□□□□ 0.69
NFATC3-203ENST00000349223 PLEKHD1A6NEE1 506 aa19.31■□□□□ 0.68
NFATC3-203ENST00000349223 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
NFATC3-203ENST00000349223 CLIP1P30622 1438 aa19.29■□□□□ 0.68
NFATC3-203ENST00000349223 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
NFATC3-203ENST00000349223 FAM9BQ8IZU0 186 aa19.27■□□□□ 0.68
NFATC3-203ENST00000349223 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
NFATC3-203ENST00000349223 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
NFATC3-203ENST00000349223 NACADO15069 1562 aa19.24■□□□□ 0.67
NFATC3-203ENST00000349223 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.67
NFATC3-203ENST00000349223 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
NFATC3-203ENST00000349223 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
NFATC3-203ENST00000349223 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
NFATC3-203ENST00000349223 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
NFATC3-203ENST00000349223 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
NFATC3-203ENST00000349223 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
NFATC3-203ENST00000349223 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
NFATC3-203ENST00000349223 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
NFATC3-203ENST00000349223 ARID4BQ4LE39 1312 aaPredicted RBP19.17■□□□□ 0.66
NFATC3-203ENST00000349223 ANP32AP39687 249 aaKnown RBP19.17■□□□□ 0.66
NFATC3-203ENST00000349223 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
NFATC3-203ENST00000349223 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
NFATC3-203ENST00000349223 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
NFATC3-203ENST00000349223 EEA1Q15075 1411 aa19.14■□□□□ 0.65
NFATC3-203ENST00000349223 A0A0G2JS52 829 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms