RNA–Protein interactions for RNA: ENST00000343225.4
Retrieved 6 of 6 RNA–protein pairs in 16.8 ms
SLC12A2-202, Transcript of solute carrier family 12 member 2, human
APPRIS ALT2 TSL 1 (best) BASIC
Gene SLC12A2, Length 5,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
SLC12A2-202 | ENST00000343225 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 29.73 | ■■■□□ 2.35 | 9e-7 | ■■■■■ 159.9 |
SLC12A2-202 | ENST00000343225 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 25.51 | ■■□□□ 1.67 | 2e-7 | ■■■■■ 127.2 |
SLC12A2-202 | ENST00000343225 | FAM120A | Q9NZB2 | 1118 aa | Known RBP eCLIP | 26.33 | ■■□□□ 1.81 | 2e-6 | ■■■■■ 28.7 |
SLC12A2-202 | ENST00000343225 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 19.1 | ■□□□□ 0.65 | 2e-7 | ■■■■■ 28 |
SLC12A2-202 | ENST00000343225 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 25.79 | ■■□□□ 1.72 | 2e-6 | ■■■■□ 26.4 |
SLC12A2-202 | ENST00000343225 | PUM2 | Q8TB72 | 1066 aa | Known RBP eCLIP | 24.26 | ■■□□□ 1.47 | 5e-6 | ■■■■□ 21.5 |