RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
RTL6-201ENST00000341255 NISCHQ9Y2I1 1504 aa26.65■■□□□ 1.86
RTL6-201ENST00000341255 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
RTL6-201ENST00000341255 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
RTL6-201ENST00000341255 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
RTL6-201ENST00000341255 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
RTL6-201ENST00000341255 APLP2Q06481 763 aa25.39■■□□□ 1.66
RTL6-201ENST00000341255 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
RTL6-201ENST00000341255 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
RTL6-201ENST00000341255 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
RTL6-201ENST00000341255 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
RTL6-201ENST00000341255 ZEB1P37275 1124 aaPredicted RBP24.82■■□□□ 1.56
RTL6-201ENST00000341255 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
RTL6-201ENST00000341255 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
RTL6-201ENST00000341255 ERICH6Q7L0X2 663 aa24.65■■□□□ 1.54
RTL6-201ENST00000341255 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
RTL6-201ENST00000341255 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
RTL6-201ENST00000341255 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
RTL6-201ENST00000341255 YTHDC1Q96MU7 727 aaKnown RBP24.39■■□□□ 1.49
RTL6-201ENST00000341255 MYT1Q01538 1121 aa24.32■■□□□ 1.48
RTL6-201ENST00000341255 NEFLP07196 543 aa24.22■■□□□ 1.47
RTL6-201ENST00000341255 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
RTL6-201ENST00000341255 HRCP23327 699 aa24.14■■□□□ 1.45
RTL6-201ENST00000341255 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
RTL6-201ENST00000341255 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
RTL6-201ENST00000341255 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
RTL6-201ENST00000341255 ITGAEP38570 1179 aa23.61■■□□□ 1.37
RTL6-201ENST00000341255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.36
RTL6-201ENST00000341255 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.36
RTL6-201ENST00000341255 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
RTL6-201ENST00000341255 DAXXQ9UER7 740 aaPredicted RBP23.48■■□□□ 1.35
RTL6-201ENST00000341255 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
RTL6-201ENST00000341255 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
RTL6-201ENST00000341255 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
RTL6-201ENST00000341255 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
RTL6-201ENST00000341255 RTL5Q5HYW3 569 aaPredicted RBP23.11■■□□□ 1.29
RTL6-201ENST00000341255 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
RTL6-201ENST00000341255 BCANQ96GW7 911 aa23■■□□□ 1.27
RTL6-201ENST00000341255 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
RTL6-201ENST00000341255 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
RTL6-201ENST00000341255 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
RTL6-201ENST00000341255 ABCC9O60706 1549 aa22.96■■□□□ 1.27
RTL6-201ENST00000341255 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
RTL6-201ENST00000341255 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
RTL6-201ENST00000341255 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
RTL6-201ENST00000341255 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
RTL6-201ENST00000341255 ANP32CO43423 234 aa22.76■■□□□ 1.23
RTL6-201ENST00000341255 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
RTL6-201ENST00000341255 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
RTL6-201ENST00000341255 FBLN2P98095 1184 aa22.59■■□□□ 1.21
RTL6-201ENST00000341255 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
RTL6-201ENST00000341255 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
RTL6-201ENST00000341255 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
RTL6-201ENST00000341255 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
RTL6-201ENST00000341255 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
RTL6-201ENST00000341255 FKBP8Q14318 412 aa22.33■■□□□ 1.16
RTL6-201ENST00000341255 CANXP27824 592 aaKnown RBP22.31■■□□□ 1.16
RTL6-201ENST00000341255 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
RTL6-201ENST00000341255 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
RTL6-201ENST00000341255 NEFMP07197 916 aa22.27■■□□□ 1.16
RTL6-201ENST00000341255 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
RTL6-201ENST00000341255 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
RTL6-201ENST00000341255 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
RTL6-201ENST00000341255 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.14
RTL6-201ENST00000341255 SCRIBQ14160 1630 aa22.14■■□□□ 1.14
RTL6-201ENST00000341255 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
RTL6-201ENST00000341255 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
RTL6-201ENST00000341255 DDX10Q13206 875 aaKnown RBP22.11■■□□□ 1.13
RTL6-201ENST00000341255 EIF5BO60841 1220 aaKnown RBP22.08■■□□□ 1.13
RTL6-201ENST00000341255 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
RTL6-201ENST00000341255 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
RTL6-201ENST00000341255 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
RTL6-201ENST00000341255 MIER1Q8N108 512 aa21.96■■□□□ 1.11
RTL6-201ENST00000341255 NBR1Q14596 966 aa21.94■■□□□ 1.1
RTL6-201ENST00000341255 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
RTL6-201ENST00000341255 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
RTL6-201ENST00000341255 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
RTL6-201ENST00000341255 SALL2Q9Y467 1007 aaPredicted RBP21.9■■□□□ 1.1
RTL6-201ENST00000341255 ANP32BQ92688 251 aaKnown RBP21.89■■□□□ 1.09
RTL6-201ENST00000341255 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
RTL6-201ENST00000341255 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
RTL6-201ENST00000341255 HSP90AA1P07900 732 aaKnown RBP21.86■■□□□ 1.09
RTL6-201ENST00000341255 UPF2Q9HAU5 1272 aaKnown RBP21.85■■□□□ 1.09
RTL6-201ENST00000341255 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
RTL6-201ENST00000341255 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
RTL6-201ENST00000341255 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
RTL6-201ENST00000341255 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
RTL6-201ENST00000341255 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
RTL6-201ENST00000341255 MRS2Q9HD23 443 aa21.78■■□□□ 1.08
RTL6-201ENST00000341255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
RTL6-201ENST00000341255 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
RTL6-201ENST00000341255 CLIP1P30622 1438 aa21.72■■□□□ 1.07
RTL6-201ENST00000341255 GLIPR1L2Q4G1C9 344 aa21.7■■□□□ 1.06
RTL6-201ENST00000341255 ARXQ96QS3 562 aa21.7■■□□□ 1.06
RTL6-201ENST00000341255 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
RTL6-201ENST00000341255 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
RTL6-201ENST00000341255 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
RTL6-201ENST00000341255 WDR43Q15061 677 aaKnown RBP eCLIP21.67■■□□□ 1.06
RTL6-201ENST00000341255 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
RTL6-201ENST00000341255 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms