RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 NISCHQ9Y2I1 1504 aa23.67■■□□□ 1.38
RANBP3-202ENST00000340578 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
RANBP3-202ENST00000340578 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
RANBP3-202ENST00000340578 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
RANBP3-202ENST00000340578 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
RANBP3-202ENST00000340578 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
RANBP3-202ENST00000340578 ABCC9O60706 1549 aa19.45■□□□□ 0.7
RANBP3-202ENST00000340578 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
RANBP3-202ENST00000340578 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
RANBP3-202ENST00000340578 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
RANBP3-202ENST00000340578 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
RANBP3-202ENST00000340578 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
RANBP3-202ENST00000340578 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
RANBP3-202ENST00000340578 NACADO15069 1562 aa18.68■□□□□ 0.58
RANBP3-202ENST00000340578 MYT1Q01538 1121 aa18.68■□□□□ 0.58
RANBP3-202ENST00000340578 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
RANBP3-202ENST00000340578 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
RANBP3-202ENST00000340578 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
RANBP3-202ENST00000340578 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
RANBP3-202ENST00000340578 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
RANBP3-202ENST00000340578 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
RANBP3-202ENST00000340578 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
RANBP3-202ENST00000340578 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.538e-7■■□□□ 12.1
RANBP3-202ENST00000340578 HRCP23327 699 aa18.31■□□□□ 0.52
RANBP3-202ENST00000340578 WIZO95785 1651 aa18.28■□□□□ 0.52
RANBP3-202ENST00000340578 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
RANBP3-202ENST00000340578 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
RANBP3-202ENST00000340578 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
RANBP3-202ENST00000340578 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
RANBP3-202ENST00000340578 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
RANBP3-202ENST00000340578 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
RANBP3-202ENST00000340578 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
RANBP3-202ENST00000340578 TOP2AP11388 1531 aaKnown RBP17.99■□□□□ 0.47
RANBP3-202ENST00000340578 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
RANBP3-202ENST00000340578 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
RANBP3-202ENST00000340578 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
RANBP3-202ENST00000340578 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
RANBP3-202ENST00000340578 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
RANBP3-202ENST00000340578 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
RANBP3-202ENST00000340578 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
RANBP3-202ENST00000340578 SOGA1O94964 1423 aa17.72■□□□□ 0.43
RANBP3-202ENST00000340578 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
RANBP3-202ENST00000340578 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
RANBP3-202ENST00000340578 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
RANBP3-202ENST00000340578 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.42
RANBP3-202ENST00000340578 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
RANBP3-202ENST00000340578 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
RANBP3-202ENST00000340578 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.415e-6■■■■■ 29.2
RANBP3-202ENST00000340578 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
RANBP3-202ENST00000340578 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
RANBP3-202ENST00000340578 EEA1Q15075 1411 aa17.56■□□□□ 0.4
RANBP3-202ENST00000340578 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
RANBP3-202ENST00000340578 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
RANBP3-202ENST00000340578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
RANBP3-202ENST00000340578 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
RANBP3-202ENST00000340578 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
RANBP3-202ENST00000340578 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
RANBP3-202ENST00000340578 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
RANBP3-202ENST00000340578 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
RANBP3-202ENST00000340578 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.37
RANBP3-202ENST00000340578 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
RANBP3-202ENST00000340578 CLIP1P30622 1438 aa17.29■□□□□ 0.36
RANBP3-202ENST00000340578 KIF21BO75037 1637 aa17.27■□□□□ 0.35
RANBP3-202ENST00000340578 RAPGEF2Q9Y4G8 1499 aa17.27■□□□□ 0.35
RANBP3-202ENST00000340578 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
RANBP3-202ENST00000340578 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
RANBP3-202ENST00000340578 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
RANBP3-202ENST00000340578 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
RANBP3-202ENST00000340578 APLP2Q06481 763 aa17.23■□□□□ 0.35
RANBP3-202ENST00000340578 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
RANBP3-202ENST00000340578 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
RANBP3-202ENST00000340578 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
RANBP3-202ENST00000340578 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
RANBP3-202ENST00000340578 CFTRP13569 1480 aa17.14■□□□□ 0.33
RANBP3-202ENST00000340578 CUX1P39880 1505 aa17.14■□□□□ 0.33
RANBP3-202ENST00000340578 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
RANBP3-202ENST00000340578 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
RANBP3-202ENST00000340578 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
RANBP3-202ENST00000340578 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
RANBP3-202ENST00000340578 DIEXFQ68CQ4 756 aaKnown RBP16.97■□□□□ 0.31
RANBP3-202ENST00000340578 CUX2O14529 1486 aa16.96■□□□□ 0.31
RANBP3-202ENST00000340578 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
RANBP3-202ENST00000340578 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
RANBP3-202ENST00000340578 IGF1RP08069 1367 aa16.91■□□□□ 0.3
RANBP3-202ENST00000340578 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
RANBP3-202ENST00000340578 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
RANBP3-202ENST00000340578 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
RANBP3-202ENST00000340578 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
RANBP3-202ENST00000340578 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
RANBP3-202ENST00000340578 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
RANBP3-202ENST00000340578 NESP48681 1621 aa16.81■□□□□ 0.28
RANBP3-202ENST00000340578 ITGAEP38570 1179 aa16.8■□□□□ 0.28
RANBP3-202ENST00000340578 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
RANBP3-202ENST00000340578 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.27
RANBP3-202ENST00000340578 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
RANBP3-202ENST00000340578 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
RANBP3-202ENST00000340578 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
RANBP3-202ENST00000340578 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
RANBP3-202ENST00000340578 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
RANBP3-202ENST00000340578 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms