RNA–Protein interactions for RNA: ENST00000338957.4

ZC3H12B-201, Transcript of zinc finger CCCH-type containing 12B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H12B, Length 7,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12B-201ENST00000338957 DCAF8L2P0C7V8 631 aa9.39□□□□□ -0.91
ZC3H12B-201ENST00000338957 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
ZC3H12B-201ENST00000338957 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
ZC3H12B-201ENST00000338957 MYT1Q01538 1121 aa8.67□□□□□ -1.02
ZC3H12B-201ENST00000338957 PELP1Q8IZL8 1130 aaKnown RBP8.53□□□□□ -1.04
ZC3H12B-201ENST00000338957 TTBK1Q5TCY1 1321 aaPredicted RBP8.51□□□□□ -1.05
ZC3H12B-201ENST00000338957 SHROOM4Q9ULL8 1493 aa8.49□□□□□ -1.05
ZC3H12B-201ENST00000338957 NISCHQ9Y2I1 1504 aa8.46□□□□□ -1.05
ZC3H12B-201ENST00000338957 RANGAP1P46060 587 aaPredicted RBP8.4□□□□□ -1.06
ZC3H12B-201ENST00000338957 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
ZC3H12B-201ENST00000338957 APLP2Q06481 763 aa8.38□□□□□ -1.07
ZC3H12B-201ENST00000338957 FAM9AQ8IZU1 332 aaPredicted RBP8.36□□□□□ -1.07
ZC3H12B-201ENST00000338957 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
ZC3H12B-201ENST00000338957 PCGF6Q9BYE7 350 aa8.21□□□□□ -1.1
ZC3H12B-201ENST00000338957 CCER1Q8TC90 406 aaPredicted RBP8.1□□□□□ -1.11
ZC3H12B-201ENST00000338957 YTHDC1Q96MU7 727 aaKnown RBP8.1□□□□□ -1.11
ZC3H12B-201ENST00000338957 CHIC1Q5VXU3 224 aa8.07□□□□□ -1.12
ZC3H12B-201ENST00000338957 MYT1LQ9UL68 1186 aa8.05□□□□□ -1.12
ZC3H12B-201ENST00000338957 CNGB1Q14028 1251 aaPredicted RBP8.04□□□□□ -1.12
ZC3H12B-201ENST00000338957 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
ZC3H12B-201ENST00000338957 PPARGC1BQ86YN6 1023 aaKnown RBP8.01□□□□□ -1.13
ZC3H12B-201ENST00000338957 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
ZC3H12B-201ENST00000338957 CENPBP07199 599 aaPredicted RBP7.97□□□□□ -1.13
ZC3H12B-201ENST00000338957 NEFLP07196 543 aa7.95□□□□□ -1.14
ZC3H12B-201ENST00000338957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.94□□□□□ -1.14
ZC3H12B-201ENST00000338957 HNRNPUL2Q1KMD3 747 aaKnown RBP7.94□□□□□ -1.14
ZC3H12B-201ENST00000338957 ZEB1P37275 1124 aaPredicted RBP7.93□□□□□ -1.14
ZC3H12B-201ENST00000338957 TRIM41Q8WV44 630 aa7.92□□□□□ -1.14
ZC3H12B-201ENST00000338957 ITGAEP38570 1179 aa7.92□□□□□ -1.14
ZC3H12B-201ENST00000338957 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
ZC3H12B-201ENST00000338957 DAXXQ9UER7 740 aaPredicted RBP7.86□□□□□ -1.15
ZC3H12B-201ENST00000338957 BCL11AQ9H165 835 aa7.77□□□□□ -1.17
ZC3H12B-201ENST00000338957 CLSPNQ9HAW4 1339 aa7.73□□□□□ -1.17
ZC3H12B-201ENST00000338957 SLC24A1O60721 1099 aa7.71□□□□□ -1.18
ZC3H12B-201ENST00000338957 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
ZC3H12B-201ENST00000338957 HRCP23327 699 aa7.67□□□□□ -1.18
ZC3H12B-201ENST00000338957 EIF5BO60841 1220 aaKnown RBP7.66□□□□□ -1.18
ZC3H12B-201ENST00000338957 ZNF326Q5BKZ1 582 aaKnown RBP7.63□□□□□ -1.19
ZC3H12B-201ENST00000338957 PLPPR3Q6T4P5 718 aa7.62□□□□□ -1.19
ZC3H12B-201ENST00000338957 RTL5Q5HYW3 569 aaPredicted RBP7.61□□□□□ -1.19
ZC3H12B-201ENST00000338957 BCANQ96GW7 911 aa7.6□□□□□ -1.19
ZC3H12B-201ENST00000338957 TRIM52Q96A61 297 aa7.6□□□□□ -1.19
ZC3H12B-201ENST00000338957 FAM50AQ14320 339 aaKnown RBP7.57□□□□□ -1.2
ZC3H12B-201ENST00000338957 TRIM26Q12899 539 aaPredicted RBP7.56□□□□□ -1.2
ZC3H12B-201ENST00000338957 GLIPR1L2Q4G1C9 344 aa7.56□□□□□ -1.2
ZC3H12B-201ENST00000338957 NEUROD1Q13562 356 aa7.56□□□□□ -1.2
ZC3H12B-201ENST00000338957 LOC105371045A0A1W2PR82 267 aa7.56□□□□□ -1.2
ZC3H12B-201ENST00000338957 ARID3CA6NKF2 412 aa7.55□□□□□ -1.2
ZC3H12B-201ENST00000338957 FBLN2P98095 1184 aa7.55□□□□□ -1.2
ZC3H12B-201ENST00000338957 ZBTB47Q9UFB7 747 aaPredicted RBP7.53□□□□□ -1.2
ZC3H12B-201ENST00000338957 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
ZC3H12B-201ENST00000338957 PLEKHG5O94827 1062 aa7.44□□□□□ -1.22
ZC3H12B-201ENST00000338957 A0A0G2JS52 829 aa7.43□□□□□ -1.22
ZC3H12B-201ENST00000338957 PABPN1Q86U42 306 aaKnown RBP eCLIP7.42□□□□□ -1.22
ZC3H12B-201ENST00000338957 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
ZC3H12B-201ENST00000338957 SENP3Q9H4L4 574 aaPredicted RBP7.41□□□□□ -1.22
ZC3H12B-201ENST00000338957 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
ZC3H12B-201ENST00000338957 ZNF777Q9ULD5 760 aaPredicted RBP7.41□□□□□ -1.22
ZC3H12B-201ENST00000338957 SCAF1Q9H7N4 1312 aaKnown RBP7.4□□□□□ -1.23
ZC3H12B-201ENST00000338957 P3H3Q8IVL6 736 aa7.4□□□□□ -1.23
ZC3H12B-201ENST00000338957 NEFMP07197 916 aa7.4□□□□□ -1.23
ZC3H12B-201ENST00000338957 CHGAP10645 457 aaKnown RBP7.39□□□□□ -1.23
ZC3H12B-201ENST00000338957 AMER1Q5JTC6 1135 aaPredicted RBP7.37□□□□□ -1.23
ZC3H12B-201ENST00000338957 ESF1Q9H501 851 aaKnown RBP7.36□□□□□ -1.23
ZC3H12B-201ENST00000338957 ANP32CO43423 234 aa7.35□□□□□ -1.23
ZC3H12B-201ENST00000338957 STAG3Q9UJ98 1225 aa7.35□□□□□ -1.23
ZC3H12B-201ENST00000338957 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
ZC3H12B-201ENST00000338957 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.23
ZC3H12B-201ENST00000338957 ARXQ96QS3 562 aa7.33□□□□□ -1.24
ZC3H12B-201ENST00000338957 SALL2Q9Y467 1007 aaPredicted RBP7.33□□□□□ -1.24
ZC3H12B-201ENST00000338957 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
ZC3H12B-201ENST00000338957 HSP90AA1P07900 732 aaKnown RBP7.3□□□□□ -1.24
ZC3H12B-201ENST00000338957 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
ZC3H12B-201ENST00000338957 C14orf37Q86TY3 774 aa7.25□□□□□ -1.25
ZC3H12B-201ENST00000338957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.24□□□□□ -1.25
ZC3H12B-201ENST00000338957 ANP32AP39687 249 aaKnown RBP7.24□□□□□ -1.25
ZC3H12B-201ENST00000338957 CDK11BP21127 795 aaKnown RBP7.23□□□□□ -1.25
ZC3H12B-201ENST00000338957 FAM9BQ8IZU0 186 aa7.22□□□□□ -1.25
ZC3H12B-201ENST00000338957 TPRNQ4KMQ1 711 aa7.22□□□□□ -1.25
ZC3H12B-201ENST00000338957 ANP32BQ92688 251 aaKnown RBP7.21□□□□□ -1.25
ZC3H12B-201ENST00000338957 SENP3-EIF4A1A0A087X0R7 540 aa7.21□□□□□ -1.26
ZC3H12B-201ENST00000338957 TNNT2P45379 298 aaPredicted RBP7.21□□□□□ -1.26
ZC3H12B-201ENST00000338957 TAOK2Q9UL54 1235 aa7.21□□□□□ -1.26
ZC3H12B-201ENST00000338957 ACIN1Q9UKV3 1341 aaKnown RBP7.2□□□□□ -1.26
ZC3H12B-201ENST00000338957 DCAF1Q9Y4B6 1507 aa7.2□□□□□ -1.26
ZC3H12B-201ENST00000338957 NCBP3Q53F19 620 aaKnown RBP7.19□□□□□ -1.26
ZC3H12B-201ENST00000338957 CHIC2Q9UKJ5 165 aa7.18□□□□□ -1.26
ZC3H12B-201ENST00000338957 NPM1P06748 294 aaKnown RBP eCLIP7.18□□□□□ -1.26
ZC3H12B-201ENST00000338957 FKBP8Q14318 412 aa7.18□□□□□ -1.26
ZC3H12B-201ENST00000338957 NBR1Q14596 966 aa7.17□□□□□ -1.26
ZC3H12B-201ENST00000338957 KDM2AQ9Y2K7 1162 aa7.17□□□□□ -1.26
ZC3H12B-201ENST00000338957 HAP1P54257 671 aaPredicted RBP7.16□□□□□ -1.26
ZC3H12B-201ENST00000338957 ABCC9O60706 1549 aa7.15□□□□□ -1.26
ZC3H12B-201ENST00000338957 HNRNPUQ00839 825 aaKnown RBP eCLIP7.15□□□□□ -1.26
ZC3H12B-201ENST00000338957 UPF2Q9HAU5 1272 aaKnown RBP7.15□□□□□ -1.26
ZC3H12B-201ENST00000338957 IRX6P78412 446 aaPredicted RBP7.15□□□□□ -1.27
ZC3H12B-201ENST00000338957 DDX10Q13206 875 aaKnown RBP7.12□□□□□ -1.27
ZC3H12B-201ENST00000338957 PPP1R15AO75807 674 aaPredicted RBP7.12□□□□□ -1.27
ZC3H12B-201ENST00000338957 HIRIP3Q9BW71 556 aaPredicted RBP7.12□□□□□ -1.27
ZC3H12B-201ENST00000338957 ZCCHC6Q5VYS8 1495 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms