RNA–Protein interactions for RNA: ENST00000337652.5

MEN1-203, Transcript of menin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MEN1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-203ENST00000337652 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
MEN1-203ENST00000337652 SHROOM4Q9ULL8 1493 aa32.83■■■□□ 2.85
MEN1-203ENST00000337652 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
MEN1-203ENST00000337652 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
MEN1-203ENST00000337652 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
MEN1-203ENST00000337652 SUPT5HO00267 1087 aaKnown RBP32.03■■■□□ 2.72
MEN1-203ENST00000337652 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
MEN1-203ENST00000337652 ABCC9O60706 1549 aa30.83■■■□□ 2.53
MEN1-203ENST00000337652 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
MEN1-203ENST00000337652 CHIC1Q5VXU3 224 aa30.64■■■□□ 2.5
MEN1-203ENST00000337652 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
MEN1-203ENST00000337652 NACADO15069 1562 aa30.1■■■□□ 2.41
MEN1-203ENST00000337652 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
MEN1-203ENST00000337652 LOC105371045A0A1W2PR82 267 aa29.96■■■□□ 2.39
MEN1-203ENST00000337652 CECR2Q9BXF3 1484 aa29.93■■■□□ 2.38
MEN1-203ENST00000337652 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
MEN1-203ENST00000337652 EHMT2Q96KQ7 1210 aa29.73■■■□□ 2.35
MEN1-203ENST00000337652 FAM9AQ8IZU1 332 aaPredicted RBP29.72■■■□□ 2.35
MEN1-203ENST00000337652 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
MEN1-203ENST00000337652 TRIM41Q8WV44 630 aa29.7■■■□□ 2.34
MEN1-203ENST00000337652 PCGF6Q9BYE7 350 aa29.59■■■□□ 2.33
MEN1-203ENST00000337652 WIZO95785 1651 aa29.58■■■□□ 2.33
MEN1-203ENST00000337652 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
MEN1-203ENST00000337652 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
MEN1-203ENST00000337652 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
MEN1-203ENST00000337652 SMARCA4P51532 1647 aa29.1■■■□□ 2.25
MEN1-203ENST00000337652 HRCP23327 699 aa29.06■■■□□ 2.24
MEN1-203ENST00000337652 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.22
MEN1-203ENST00000337652 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
MEN1-203ENST00000337652 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
MEN1-203ENST00000337652 ABCC8Q09428 1581 aa28.89■■■□□ 2.22
MEN1-203ENST00000337652 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
MEN1-203ENST00000337652 TRIM26Q12899 539 aaPredicted RBP28.85■■■□□ 2.21
MEN1-203ENST00000337652 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
MEN1-203ENST00000337652 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
MEN1-203ENST00000337652 TTBK1Q5TCY1 1321 aaPredicted RBP28.63■■■□□ 2.17
MEN1-203ENST00000337652 SOGA1O94964 1423 aa28.54■■■□□ 2.16
MEN1-203ENST00000337652 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
MEN1-203ENST00000337652 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
MEN1-203ENST00000337652 UBTFP17480 764 aaKnown RBP28.45■■■□□ 2.15
MEN1-203ENST00000337652 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
MEN1-203ENST00000337652 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
MEN1-203ENST00000337652 CSRNP3Q8WYN3 585 aa28.34■■■□□ 2.13
MEN1-203ENST00000337652 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
MEN1-203ENST00000337652 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
MEN1-203ENST00000337652 CEP162Q5TB80 1403 aa28.19■■■□□ 2.1
MEN1-203ENST00000337652 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
MEN1-203ENST00000337652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.05■■■□□ 2.08
MEN1-203ENST00000337652 EEA1Q15075 1411 aa28.04■■■□□ 2.08
MEN1-203ENST00000337652 TNIKQ9UKE5 1360 aa28.04■■■□□ 2.08
MEN1-203ENST00000337652 GOLGA3Q08378 1498 aa28■■■□□ 2.07
MEN1-203ENST00000337652 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
MEN1-203ENST00000337652 CCER1Q8TC90 406 aaPredicted RBP27.92■■■□□ 2.06
MEN1-203ENST00000337652 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
MEN1-203ENST00000337652 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
MEN1-203ENST00000337652 RAPGEF2Q9Y4G8 1499 aa27.82■■■□□ 2.04
MEN1-203ENST00000337652 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
MEN1-203ENST00000337652 CLIP1P30622 1438 aa27.77■■■□□ 2.04
MEN1-203ENST00000337652 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
MEN1-203ENST00000337652 APLP2Q06481 763 aa27.7■■■□□ 2.03
MEN1-203ENST00000337652 KIF21BO75037 1637 aa27.68■■■□□ 2.02
MEN1-203ENST00000337652 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
MEN1-203ENST00000337652 CUX1P39880 1505 aa27.66■■■□□ 2.02
MEN1-203ENST00000337652 CFTRP13569 1480 aa27.61■■■□□ 2.01
MEN1-203ENST00000337652 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
MEN1-203ENST00000337652 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
MEN1-203ENST00000337652 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
MEN1-203ENST00000337652 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
MEN1-203ENST00000337652 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
MEN1-203ENST00000337652 CUX2O14529 1486 aa27.41■■□□□ 1.98
MEN1-203ENST00000337652 PRXQ9BXM0 1461 aa27.39■■□□□ 1.97
MEN1-203ENST00000337652 NESP48681 1621 aa27.31■■□□□ 1.96
MEN1-203ENST00000337652 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
MEN1-203ENST00000337652 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
MEN1-203ENST00000337652 KANK4Q5T7N3 995 aaPredicted RBP27.28■■□□□ 1.96
MEN1-203ENST00000337652 DNAJC5BQ9UF47 199 aa27.27■■□□□ 1.96
MEN1-203ENST00000337652 FANCD2Q9BXW9 1451 aa27.26■■□□□ 1.95
MEN1-203ENST00000337652 P3H3Q8IVL6 736 aa27.26■■□□□ 1.95
MEN1-203ENST00000337652 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
MEN1-203ENST00000337652 ATP1B4Q9UN42 357 aaPredicted RBP27.24■■□□□ 1.95
MEN1-203ENST00000337652 PRDM2Q13029 1718 aa27.23■■□□□ 1.95
MEN1-203ENST00000337652 ITGAEP38570 1179 aa27.21■■□□□ 1.95
MEN1-203ENST00000337652 IGF1RP08069 1367 aa27.21■■□□□ 1.95
MEN1-203ENST00000337652 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
MEN1-203ENST00000337652 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
MEN1-203ENST00000337652 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
MEN1-203ENST00000337652 DIEXFQ68CQ4 756 aaKnown RBP27.05■■□□□ 1.92
MEN1-203ENST00000337652 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
MEN1-203ENST00000337652 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
MEN1-203ENST00000337652 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
MEN1-203ENST00000337652 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
MEN1-203ENST00000337652 ZNF316A6NFI3 1004 aaPredicted RBP26.86■■□□□ 1.89
MEN1-203ENST00000337652 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
MEN1-203ENST00000337652 FHOD3Q2V2M9 1422 aa26.84■■□□□ 1.89
MEN1-203ENST00000337652 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
MEN1-203ENST00000337652 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
MEN1-203ENST00000337652 CCNB3Q8WWL7 1395 aa26.8■■□□□ 1.88
MEN1-203ENST00000337652 LAMC3Q9Y6N6 1575 aa26.76■■□□□ 1.87
MEN1-203ENST00000337652 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
MEN1-203ENST00000337652 YTHDC1Q96MU7 727 aaKnown RBP26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms