RNA–Protein interactions for RNA: ENST00000336735.8

SEL1L-201, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L, Length 7,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-201ENST00000336735 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
SEL1L-201ENST00000336735 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
SEL1L-201ENST00000336735 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
SEL1L-201ENST00000336735 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
SEL1L-201ENST00000336735 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
SEL1L-201ENST00000336735 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
SEL1L-201ENST00000336735 FAM9AQ8IZU1 332 aaPredicted RBP15.28■□□□□ 0.04
SEL1L-201ENST00000336735 APLP2Q06481 763 aa15.17■□□□□ 0.02
SEL1L-201ENST00000336735 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
SEL1L-201ENST00000336735 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
SEL1L-201ENST00000336735 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
SEL1L-201ENST00000336735 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
SEL1L-201ENST00000336735 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
SEL1L-201ENST00000336735 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
SEL1L-201ENST00000336735 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
SEL1L-201ENST00000336735 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
SEL1L-201ENST00000336735 PPARGC1BQ86YN6 1023 aaKnown RBP14.66□□□□□ -0.06
SEL1L-201ENST00000336735 HRCP23327 699 aa14.64□□□□□ -0.07
SEL1L-201ENST00000336735 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
SEL1L-201ENST00000336735 ATP1B4Q9UN42 357 aaPredicted RBP14.62□□□□□ -0.07
SEL1L-201ENST00000336735 CHIC1Q5VXU3 224 aa14.59□□□□□ -0.07
SEL1L-201ENST00000336735 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
SEL1L-201ENST00000336735 LOC105371045A0A1W2PR82 267 aa14.56□□□□□ -0.08
SEL1L-201ENST00000336735 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
SEL1L-201ENST00000336735 NEFLP07196 543 aa14.42□□□□□ -0.1
SEL1L-201ENST00000336735 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
SEL1L-201ENST00000336735 ITGAEP38570 1179 aa14.29□□□□□ -0.12
SEL1L-201ENST00000336735 MYT1Q01538 1121 aa14.28□□□□□ -0.12
SEL1L-201ENST00000336735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
SEL1L-201ENST00000336735 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
SEL1L-201ENST00000336735 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
SEL1L-201ENST00000336735 CNGB1Q14028 1251 aaPredicted RBP13.99□□□□□ -0.17
SEL1L-201ENST00000336735 FAM50AQ14320 339 aaKnown RBP13.9□□□□□ -0.18
SEL1L-201ENST00000336735 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
SEL1L-201ENST00000336735 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEL1L-201ENST00000336735 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
SEL1L-201ENST00000336735 DAXXQ9UER7 740 aaPredicted RBP13.88□□□□□ -0.19
SEL1L-201ENST00000336735 ABCC9O60706 1549 aa13.85□□□□□ -0.19
SEL1L-201ENST00000336735 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
SEL1L-201ENST00000336735 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
SEL1L-201ENST00000336735 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
SEL1L-201ENST00000336735 BCANQ96GW7 911 aa13.79□□□□□ -0.2
SEL1L-201ENST00000336735 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
SEL1L-201ENST00000336735 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
SEL1L-201ENST00000336735 ANP32CO43423 234 aa13.71□□□□□ -0.22
SEL1L-201ENST00000336735 RTL5Q5HYW3 569 aaPredicted RBP13.68□□□□□ -0.22
SEL1L-201ENST00000336735 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
SEL1L-201ENST00000336735 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
SEL1L-201ENST00000336735 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
SEL1L-201ENST00000336735 P3H3Q8IVL6 736 aa13.61□□□□□ -0.23
SEL1L-201ENST00000336735 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
SEL1L-201ENST00000336735 CDK11AQ9UQ88 783 aaPredicted RBP13.59□□□□□ -0.23
SEL1L-201ENST00000336735 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
SEL1L-201ENST00000336735 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
SEL1L-201ENST00000336735 FBLN2P98095 1184 aa13.47□□□□□ -0.25
SEL1L-201ENST00000336735 FKBP8Q14318 412 aa13.42□□□□□ -0.26
SEL1L-201ENST00000336735 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
SEL1L-201ENST00000336735 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
SEL1L-201ENST00000336735 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
SEL1L-201ENST00000336735 TONSLQ96HA7 1378 aa13.38□□□□□ -0.27
SEL1L-201ENST00000336735 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
SEL1L-201ENST00000336735 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
SEL1L-201ENST00000336735 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEL1L-201ENST00000336735 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
SEL1L-201ENST00000336735 MIER1Q8N108 512 aa13.33□□□□□ -0.27
SEL1L-201ENST00000336735 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.28
SEL1L-201ENST00000336735 FAM9BQ8IZU0 186 aa13.3□□□□□ -0.28
SEL1L-201ENST00000336735 NPM2Q86SE8 214 aaKnown RBP13.3□□□□□ -0.28
SEL1L-201ENST00000336735 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
SEL1L-201ENST00000336735 CHIC2Q9UKJ5 165 aa13.27□□□□□ -0.29
SEL1L-201ENST00000336735 BCL11AQ9H165 835 aa13.25□□□□□ -0.29
SEL1L-201ENST00000336735 CLIP1P30622 1438 aa13.24□□□□□ -0.29
SEL1L-201ENST00000336735 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
SEL1L-201ENST00000336735 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
SEL1L-201ENST00000336735 NEFMP07197 916 aa13.2□□□□□ -0.3
SEL1L-201ENST00000336735 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
SEL1L-201ENST00000336735 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
SEL1L-201ENST00000336735 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
SEL1L-201ENST00000336735 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
SEL1L-201ENST00000336735 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
SEL1L-201ENST00000336735 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
SEL1L-201ENST00000336735 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.31
SEL1L-201ENST00000336735 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
SEL1L-201ENST00000336735 EEA1Q15075 1411 aa13.13□□□□□ -0.31
SEL1L-201ENST00000336735 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
SEL1L-201ENST00000336735 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
SEL1L-201ENST00000336735 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
SEL1L-201ENST00000336735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■■■□□ 18.9
SEL1L-201ENST00000336735 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEL1L-201ENST00000336735 RRP7BPQ9NSQ0 103 aa13.09□□□□□ -0.31
SEL1L-201ENST00000336735 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
SEL1L-201ENST00000336735 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
SEL1L-201ENST00000336735 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
SEL1L-201ENST00000336735 NBR1Q14596 966 aa13.06□□□□□ -0.32
SEL1L-201ENST00000336735 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
SEL1L-201ENST00000336735 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
SEL1L-201ENST00000336735 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
SEL1L-201ENST00000336735 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEL1L-201ENST00000336735 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.02□□□□□ -0.32
SEL1L-201ENST00000336735 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms