RNA–Protein interactions for RNA: ENST00000336615.8

PNPLA2-201, Transcript of patatin like phospholipase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNPLA2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA2-201ENST00000336615 NISCHQ9Y2I1 1504 aa39.43■■■■□ 3.9
PNPLA2-201ENST00000336615 CCDC180Q9P1Z9 1646 aa33.67■■■□□ 2.98
PNPLA2-201ENST00000336615 ZCCHC6Q5VYS8 1495 aaKnown RBP33.32■■■□□ 2.92
PNPLA2-201ENST00000336615 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
PNPLA2-201ENST00000336615 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
PNPLA2-201ENST00000336615 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
PNPLA2-201ENST00000336615 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
PNPLA2-201ENST00000336615 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
PNPLA2-201ENST00000336615 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
PNPLA2-201ENST00000336615 SCRIBQ14160 1630 aa31.43■■■□□ 2.62
PNPLA2-201ENST00000336615 ABCC9O60706 1549 aa31.38■■■□□ 2.61
PNPLA2-201ENST00000336615 NACADO15069 1562 aa31.17■■■□□ 2.58
PNPLA2-201ENST00000336615 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
PNPLA2-201ENST00000336615 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
PNPLA2-201ENST00000336615 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
PNPLA2-201ENST00000336615 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
PNPLA2-201ENST00000336615 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
PNPLA2-201ENST00000336615 WIZO95785 1651 aa30.45■■■□□ 2.46
PNPLA2-201ENST00000336615 TRIM41Q8WV44 630 aa30.38■■■□□ 2.45
PNPLA2-201ENST00000336615 PCGF6Q9BYE7 350 aa30.32■■■□□ 2.44
PNPLA2-201ENST00000336615 BAZ1AQ9NRL2 1556 aaPredicted RBP30.3■■■□□ 2.44
PNPLA2-201ENST00000336615 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
PNPLA2-201ENST00000336615 HRCP23327 699 aa30.21■■■□□ 2.43
PNPLA2-201ENST00000336615 SMARCA4P51532 1647 aa30.08■■■□□ 2.41
PNPLA2-201ENST00000336615 FAM9AQ8IZU1 332 aaPredicted RBP30.07■■■□□ 2.4
PNPLA2-201ENST00000336615 TOP2AP11388 1531 aaKnown RBP29.99■■■□□ 2.39
PNPLA2-201ENST00000336615 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
PNPLA2-201ENST00000336615 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
PNPLA2-201ENST00000336615 TRIM26Q12899 539 aaPredicted RBP29.86■■■□□ 2.37
PNPLA2-201ENST00000336615 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
PNPLA2-201ENST00000336615 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
PNPLA2-201ENST00000336615 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
PNPLA2-201ENST00000336615 EHMT2Q96KQ7 1210 aa29.76■■■□□ 2.36
PNPLA2-201ENST00000336615 ABCC8Q09428 1581 aa29.65■■■□□ 2.34
PNPLA2-201ENST00000336615 PPARGC1BQ86YN6 1023 aaKnown RBP29.57■■■□□ 2.32
PNPLA2-201ENST00000336615 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
PNPLA2-201ENST00000336615 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
PNPLA2-201ENST00000336615 SOGA1O94964 1423 aa29.34■■■□□ 2.29
PNPLA2-201ENST00000336615 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
PNPLA2-201ENST00000336615 RUSC2Q8N2Y8 1516 aa29.21■■■□□ 2.27
PNPLA2-201ENST00000336615 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
PNPLA2-201ENST00000336615 EEA1Q15075 1411 aa29.19■■■□□ 2.26
PNPLA2-201ENST00000336615 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
PNPLA2-201ENST00000336615 TNIKQ9UKE5 1360 aa29.09■■■□□ 2.25
PNPLA2-201ENST00000336615 ZEB1P37275 1124 aaPredicted RBP29.09■■■□□ 2.25
PNPLA2-201ENST00000336615 CEP162Q5TB80 1403 aa29.09■■■□□ 2.25
PNPLA2-201ENST00000336615 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
PNPLA2-201ENST00000336615 UBTFP17480 764 aaKnown RBP28.96■■■□□ 2.23
PNPLA2-201ENST00000336615 GOLGA3Q08378 1498 aa28.95■■■□□ 2.23
PNPLA2-201ENST00000336615 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
PNPLA2-201ENST00000336615 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
PNPLA2-201ENST00000336615 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
PNPLA2-201ENST00000336615 KIF21BO75037 1637 aa28.81■■■□□ 2.2
PNPLA2-201ENST00000336615 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
PNPLA2-201ENST00000336615 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
PNPLA2-201ENST00000336615 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
PNPLA2-201ENST00000336615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.68■■■□□ 2.18
PNPLA2-201ENST00000336615 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.17
PNPLA2-201ENST00000336615 CLIP1P30622 1438 aa28.59■■■□□ 2.17
PNPLA2-201ENST00000336615 CCER1Q8TC90 406 aaPredicted RBP28.58■■■□□ 2.17
PNPLA2-201ENST00000336615 CFTRP13569 1480 aa28.55■■■□□ 2.16
PNPLA2-201ENST00000336615 CUX1P39880 1505 aa28.53■■■□□ 2.16
PNPLA2-201ENST00000336615 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
PNPLA2-201ENST00000336615 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
PNPLA2-201ENST00000336615 ERICH3Q5RHP9 1530 aa28.39■■■□□ 2.14
PNPLA2-201ENST00000336615 RANGAP1P46060 587 aaPredicted RBP28.38■■■□□ 2.13
PNPLA2-201ENST00000336615 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
PNPLA2-201ENST00000336615 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
PNPLA2-201ENST00000336615 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
PNPLA2-201ENST00000336615 APLP2Q06481 763 aa28.24■■■□□ 2.11
PNPLA2-201ENST00000336615 CC2D2AQ9P2K1 1620 aa28.22■■■□□ 2.11
PNPLA2-201ENST00000336615 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
PNPLA2-201ENST00000336615 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
PNPLA2-201ENST00000336615 CUX2O14529 1486 aa28.09■■■□□ 2.09
PNPLA2-201ENST00000336615 IGF1RP08069 1367 aa28.05■■■□□ 2.08
PNPLA2-201ENST00000336615 FGD5Q6ZNL6 1462 aa28.05■■■□□ 2.08
PNPLA2-201ENST00000336615 ARHGAP35Q9NRY4 1499 aa27.99■■■□□ 2.07
PNPLA2-201ENST00000336615 KANK4Q5T7N3 995 aaPredicted RBP27.98■■■□□ 2.07
PNPLA2-201ENST00000336615 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
PNPLA2-201ENST00000336615 CARMIL1Q5VZK9 1371 aa27.91■■■□□ 2.06
PNPLA2-201ENST00000336615 DIEXFQ68CQ4 756 aaKnown RBP27.89■■■□□ 2.06
PNPLA2-201ENST00000336615 NESP48681 1621 aa27.84■■■□□ 2.05
PNPLA2-201ENST00000336615 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
PNPLA2-201ENST00000336615 ZNF316A6NFI3 1004 aaPredicted RBP27.78■■■□□ 2.04
PNPLA2-201ENST00000336615 RRBP1Q9P2E9 1410 aaKnown RBP27.78■■■□□ 2.04
PNPLA2-201ENST00000336615 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
PNPLA2-201ENST00000336615 TOPBP1Q92547 1522 aa27.78■■■□□ 2.04
PNPLA2-201ENST00000336615 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
PNPLA2-201ENST00000336615 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
PNPLA2-201ENST00000336615 TIAM1Q13009 1591 aa27.65■■■□□ 2.02
PNPLA2-201ENST00000336615 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
PNPLA2-201ENST00000336615 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
PNPLA2-201ENST00000336615 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.02
PNPLA2-201ENST00000336615 MAP3K1Q13233 1512 aa27.64■■■□□ 2.02
PNPLA2-201ENST00000336615 LAMC3Q9Y6N6 1575 aa27.64■■■□□ 2.02
PNPLA2-201ENST00000336615 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
PNPLA2-201ENST00000336615 CLSPNQ9HAW4 1339 aa27.59■■■□□ 2.01
PNPLA2-201ENST00000336615 P3H3Q8IVL6 736 aa27.56■■■□□ 2
PNPLA2-201ENST00000336615 FHAD1B1AJZ9 1412 aa27.55■■■□□ 2
PNPLA2-201ENST00000336615 CUL7Q14999 1698 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms