RNA–Protein interactions for RNA: ENST00000335754.7

ACTR8-201, Transcript of ARP8 actin related protein 8 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ACTR8, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR8-201ENST00000335754 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
ACTR8-201ENST00000335754 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
ACTR8-201ENST00000335754 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.75
ACTR8-201ENST00000335754 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
ACTR8-201ENST00000335754 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
ACTR8-201ENST00000335754 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
ACTR8-201ENST00000335754 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
ACTR8-201ENST00000335754 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
ACTR8-201ENST00000335754 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
ACTR8-201ENST00000335754 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
ACTR8-201ENST00000335754 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
ACTR8-201ENST00000335754 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.58
ACTR8-201ENST00000335754 ABCC9O60706 1549 aa18.56■□□□□ 0.56
ACTR8-201ENST00000335754 HRCP23327 699 aa18.52■□□□□ 0.56
ACTR8-201ENST00000335754 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
ACTR8-201ENST00000335754 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
ACTR8-201ENST00000335754 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
ACTR8-201ENST00000335754 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
ACTR8-201ENST00000335754 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
ACTR8-201ENST00000335754 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
ACTR8-201ENST00000335754 NACADO15069 1562 aa18.29■□□□□ 0.52
ACTR8-201ENST00000335754 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
ACTR8-201ENST00000335754 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
ACTR8-201ENST00000335754 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
ACTR8-201ENST00000335754 WIZO95785 1651 aa18.1■□□□□ 0.49
ACTR8-201ENST00000335754 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
ACTR8-201ENST00000335754 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
ACTR8-201ENST00000335754 ABCC8Q09428 1581 aa17.77■□□□□ 0.43
ACTR8-201ENST00000335754 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
ACTR8-201ENST00000335754 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
ACTR8-201ENST00000335754 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
ACTR8-201ENST00000335754 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
ACTR8-201ENST00000335754 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
ACTR8-201ENST00000335754 TTBK1Q5TCY1 1321 aaPredicted RBP17.68■□□□□ 0.42
ACTR8-201ENST00000335754 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
ACTR8-201ENST00000335754 SOGA1O94964 1423 aa17.61■□□□□ 0.41
ACTR8-201ENST00000335754 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.41
ACTR8-201ENST00000335754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
ACTR8-201ENST00000335754 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
ACTR8-201ENST00000335754 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
ACTR8-201ENST00000335754 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
ACTR8-201ENST00000335754 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
ACTR8-201ENST00000335754 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
ACTR8-201ENST00000335754 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
ACTR8-201ENST00000335754 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
ACTR8-201ENST00000335754 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
ACTR8-201ENST00000335754 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
ACTR8-201ENST00000335754 RANGAP1P46060 587 aaPredicted RBP17.29■□□□□ 0.36
ACTR8-201ENST00000335754 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
ACTR8-201ENST00000335754 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
ACTR8-201ENST00000335754 EEA1Q15075 1411 aa17.25■□□□□ 0.35
ACTR8-201ENST00000335754 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
ACTR8-201ENST00000335754 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
ACTR8-201ENST00000335754 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
ACTR8-201ENST00000335754 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
ACTR8-201ENST00000335754 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
ACTR8-201ENST00000335754 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
ACTR8-201ENST00000335754 CLIP1P30622 1438 aa17.12■□□□□ 0.33
ACTR8-201ENST00000335754 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
ACTR8-201ENST00000335754 KIF21BO75037 1637 aa17.07■□□□□ 0.32
ACTR8-201ENST00000335754 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
ACTR8-201ENST00000335754 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
ACTR8-201ENST00000335754 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
ACTR8-201ENST00000335754 APLP2Q06481 763 aa16.96■□□□□ 0.31
ACTR8-201ENST00000335754 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
ACTR8-201ENST00000335754 CUX1P39880 1505 aa16.91■□□□□ 0.3
ACTR8-201ENST00000335754 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
ACTR8-201ENST00000335754 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
ACTR8-201ENST00000335754 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
ACTR8-201ENST00000335754 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
ACTR8-201ENST00000335754 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
ACTR8-201ENST00000335754 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
ACTR8-201ENST00000335754 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
ACTR8-201ENST00000335754 HMGXB3Q12766 1538 aa16.83■□□□□ 0.29
ACTR8-201ENST00000335754 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
ACTR8-201ENST00000335754 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
ACTR8-201ENST00000335754 CFTRP13569 1480 aa16.79■□□□□ 0.28
ACTR8-201ENST00000335754 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
ACTR8-201ENST00000335754 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
ACTR8-201ENST00000335754 MIER1Q8N108 512 aa16.77■□□□□ 0.28
ACTR8-201ENST00000335754 ITGAEP38570 1179 aa16.73■□□□□ 0.27
ACTR8-201ENST00000335754 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
ACTR8-201ENST00000335754 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
ACTR8-201ENST00000335754 CUX2O14529 1486 aa16.69■□□□□ 0.26
ACTR8-201ENST00000335754 DHX57Q6P158 1386 aaKnown RBP16.68■□□□□ 0.26
ACTR8-201ENST00000335754 IGF1RP08069 1367 aa16.67■□□□□ 0.26
ACTR8-201ENST00000335754 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
ACTR8-201ENST00000335754 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
ACTR8-201ENST00000335754 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
ACTR8-201ENST00000335754 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
ACTR8-201ENST00000335754 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
ACTR8-201ENST00000335754 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.24
ACTR8-201ENST00000335754 CCNB3Q8WWL7 1395 aa16.57■□□□□ 0.24
ACTR8-201ENST00000335754 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
ACTR8-201ENST00000335754 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
ACTR8-201ENST00000335754 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
ACTR8-201ENST00000335754 NESP48681 1621 aa16.49■□□□□ 0.23
ACTR8-201ENST00000335754 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
ACTR8-201ENST00000335754 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
ACTR8-201ENST00000335754 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms