RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
PTBP3-202ENST00000334318 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.68
PTBP3-202ENST00000334318 SHROOM4Q9ULL8 1493 aa10.71□□□□□ -0.7
PTBP3-202ENST00000334318 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
PTBP3-202ENST00000334318 NISCHQ9Y2I1 1504 aa10.5□□□□□ -0.73
PTBP3-202ENST00000334318 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
PTBP3-202ENST00000334318 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
PTBP3-202ENST00000334318 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTBP3-202ENST00000334318 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
PTBP3-202ENST00000334318 ABCC9O60706 1549 aa10.19□□□□□ -0.78
PTBP3-202ENST00000334318 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
PTBP3-202ENST00000334318 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
PTBP3-202ENST00000334318 CHIC1Q5VXU3 224 aa10.12□□□□□ -0.79
PTBP3-202ENST00000334318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
PTBP3-202ENST00000334318 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
PTBP3-202ENST00000334318 FBLN2P98095 1184 aa9.98□□□□□ -0.81
PTBP3-202ENST00000334318 PLPPR3Q6T4P5 718 aa9.96□□□□□ -0.82
PTBP3-202ENST00000334318 APLP2Q06481 763 aa9.92□□□□□ -0.82
PTBP3-202ENST00000334318 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
PTBP3-202ENST00000334318 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
PTBP3-202ENST00000334318 PCGF6Q9BYE7 350 aa9.68□□□□□ -0.86
PTBP3-202ENST00000334318 TRIM41Q8WV44 630 aa9.66□□□□□ -0.86
PTBP3-202ENST00000334318 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
PTBP3-202ENST00000334318 PPARGC1BQ86YN6 1023 aaKnown RBP9.6□□□□□ -0.87
PTBP3-202ENST00000334318 ITGAEP38570 1179 aa9.58□□□□□ -0.88
PTBP3-202ENST00000334318 SENP3Q9H4L4 574 aaPredicted RBP9.57□□□□□ -0.88
PTBP3-202ENST00000334318 BCANQ96GW7 911 aa9.55□□□□□ -0.88
PTBP3-202ENST00000334318 SLC4A1APQ9BWU0 796 aaKnown RBP9.5□□□□□ -0.89
PTBP3-202ENST00000334318 CNGB1Q14028 1251 aaPredicted RBP9.5□□□□□ -0.89
PTBP3-202ENST00000334318 POLR3GLQ9BT43 218 aa9.47□□□□□ -0.89
PTBP3-202ENST00000334318 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.89
PTBP3-202ENST00000334318 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
PTBP3-202ENST00000334318 NPM1P06748 294 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTBP3-202ENST00000334318 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
PTBP3-202ENST00000334318 AEBP2Q6ZN18 517 aaPredicted RBP9.41□□□□□ -0.9
PTBP3-202ENST00000334318 ESF1Q9H501 851 aaKnown RBP9.41□□□□□ -0.9
PTBP3-202ENST00000334318 ZEB1P37275 1124 aaPredicted RBP9.4□□□□□ -0.9
PTBP3-202ENST00000334318 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.91
PTBP3-202ENST00000334318 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
PTBP3-202ENST00000334318 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
PTBP3-202ENST00000334318 ARID4BQ4LE39 1312 aaPredicted RBP9.31□□□□□ -0.92
PTBP3-202ENST00000334318 SCAF1Q9H7N4 1312 aaKnown RBP9.3□□□□□ -0.92
PTBP3-202ENST00000334318 A0A0G2JS52 829 aa9.28□□□□□ -0.92
PTBP3-202ENST00000334318 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
PTBP3-202ENST00000334318 LOC105371045A0A1W2PR82 267 aa9.26□□□□□ -0.93
PTBP3-202ENST00000334318 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
PTBP3-202ENST00000334318 HRCP23327 699 aa9.25□□□□□ -0.93
PTBP3-202ENST00000334318 SLC24A1O60721 1099 aa9.25□□□□□ -0.93
PTBP3-202ENST00000334318 TRIM26Q12899 539 aaPredicted RBP9.25□□□□□ -0.93
PTBP3-202ENST00000334318 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
PTBP3-202ENST00000334318 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
PTBP3-202ENST00000334318 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
PTBP3-202ENST00000334318 FAM50AQ14320 339 aaKnown RBP9.23□□□□□ -0.93
PTBP3-202ENST00000334318 SCRIBQ14160 1630 aa9.21□□□□□ -0.93
PTBP3-202ENST00000334318 TRIM52Q96A61 297 aa9.21□□□□□ -0.94
PTBP3-202ENST00000334318 YTHDC1Q96MU7 727 aaKnown RBP9.2□□□□□ -0.94
PTBP3-202ENST00000334318 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
PTBP3-202ENST00000334318 MLECQ14165 292 aa9.16□□□□□ -0.94
PTBP3-202ENST00000334318 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
PTBP3-202ENST00000334318 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
PTBP3-202ENST00000334318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.1□□□□□ -0.955e-8■□□□□ 10.5
PTBP3-202ENST00000334318 MYT1Q01538 1121 aa9.09□□□□□ -0.95
PTBP3-202ENST00000334318 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
PTBP3-202ENST00000334318 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
PTBP3-202ENST00000334318 NEFLP07196 543 aa9.06□□□□□ -0.96
PTBP3-202ENST00000334318 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
PTBP3-202ENST00000334318 HAP1P54257 671 aaPredicted RBP9.03□□□□□ -0.96
PTBP3-202ENST00000334318 NEUROD1Q13562 356 aa8.98□□□□□ -0.97
PTBP3-202ENST00000334318 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
PTBP3-202ENST00000334318 PPP1R15AO75807 674 aaPredicted RBP8.97□□□□□ -0.97
PTBP3-202ENST00000334318 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
PTBP3-202ENST00000334318 PHF23Q9BUL5 403 aaPredicted RBP8.93□□□□□ -0.98
PTBP3-202ENST00000334318 CDK11AQ9UQ88 783 aaPredicted RBP8.92□□□□□ -0.98
PTBP3-202ENST00000334318 DIEXFQ68CQ4 756 aaKnown RBP8.92□□□□□ -0.98
PTBP3-202ENST00000334318 RB1CC1Q8TDY2 1594 aa8.88□□□□□ -0.99
PTBP3-202ENST00000334318 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
PTBP3-202ENST00000334318 DNAJC5BQ9UF47 199 aa8.86□□□□□ -0.99
PTBP3-202ENST00000334318 ARXQ96QS3 562 aa8.84□□□□□ -0.99
PTBP3-202ENST00000334318 CCDC9Q9Y3X0 531 aaKnown RBP8.83□□□□□ -1
PTBP3-202ENST00000334318 OSCARQ8IYS5 282 aa8.82□□□□□ -1
PTBP3-202ENST00000334318 PLEKHD1A6NEE1 506 aa8.8□□□□□ -1
PTBP3-202ENST00000334318 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
PTBP3-202ENST00000334318 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
PTBP3-202ENST00000334318 GGT6Q6P531 493 aa8.77□□□□□ -1.01
PTBP3-202ENST00000334318 TSPY4P0CV99 314 aa8.77□□□□□ -1.01
PTBP3-202ENST00000334318 TSPY10P0CW01 314 aa8.77□□□□□ -1.01
PTBP3-202ENST00000334318 GTF3C3Q9Y5Q9 886 aa8.77□□□□□ -1.01
PTBP3-202ENST00000334318 BAZ1BQ9UIG0 1483 aaKnown RBP8.76□□□□□ -1.01
PTBP3-202ENST00000334318 SOX12O15370 315 aa8.75□□□□□ -1.01
PTBP3-202ENST00000334318 ZNF316A6NFI3 1004 aaPredicted RBP8.73□□□□□ -1.01
PTBP3-202ENST00000334318 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
PTBP3-202ENST00000334318 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
PTBP3-202ENST00000334318 MEX3CQ5U5Q3 659 aaKnown RBP8.71□□□□□ -1.01
PTBP3-202ENST00000334318 TDRD9Q8NDG6 1382 aaKnown RBP8.71□□□□□ -1.01
PTBP3-202ENST00000334318 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
PTBP3-202ENST00000334318 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
PTBP3-202ENST00000334318 NPHP1O15259 732 aa8.7□□□□□ -1.02
PTBP3-202ENST00000334318 EIF4G1Q04637 1599 aaKnown RBP8.7□□□□□ -1.02
PTBP3-202ENST00000334318 NPM2Q86SE8 214 aaKnown RBP8.7□□□□□ -1.02
PTBP3-202ENST00000334318 NUTM2DQ5VT03 806 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms