RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 NISCHQ9Y2I1 1504 aa7.01□□□□□ -1.29
RGPD6-201ENST00000329516 EIF4G1Q04637 1599 aaKnown RBP6.35□□□□□ -1.39
RGPD6-201ENST00000329516 GOLGB1Q14789 3259 aaKnown RBP6.28□□□□□ -1.4
RGPD6-201ENST00000329516 MYO15BQ96JP2 1530 aa6.28□□□□□ -1.4
RGPD6-201ENST00000329516 UTRNP46939 3433 aa6.26□□□□□ -1.41
RGPD6-201ENST00000329516 USP34Q70CQ2 3546 aa6.15□□□□□ -1.42
RGPD6-201ENST00000329516 ZCCHC6Q5VYS8 1495 aaKnown RBP6.12□□□□□ -1.43
RGPD6-201ENST00000329516 PCNTO95613 3336 aa6.04□□□□□ -1.44
RGPD6-201ENST00000329516 UNC13AQ9UPW8 1703 aa6.03□□□□□ -1.44
RGPD6-201ENST00000329516 SRCAPQ6ZRS2 3230 aa5.99□□□□□ -1.45
RGPD6-201ENST00000329516 CCDC180Q9P1Z9 1646 aa5.98□□□□□ -1.45
RGPD6-201ENST00000329516 DCAF1Q9Y4B6 1507 aa5.97□□□□□ -1.45
RGPD6-201ENST00000329516 CENPFP49454 3210 aa5.87□□□□□ -1.47
RGPD6-201ENST00000329516 BICRAQ9NZM4 1560 aa5.86□□□□□ -1.47
RGPD6-201ENST00000329516 NACADO15069 1562 aa5.85□□□□□ -1.47
RGPD6-201ENST00000329516 LAMA3Q16787 3333 aa5.8□□□□□ -1.48
RGPD6-201ENST00000329516 ABCC9O60706 1549 aa5.77□□□□□ -1.49
RGPD6-201ENST00000329516 BRCA2P51587 3418 aa5.74□□□□□ -1.49
RGPD6-201ENST00000329516 SCRIBQ14160 1630 aa5.72□□□□□ -1.49
RGPD6-201ENST00000329516 EP400Q96L91 3159 aa5.72□□□□□ -1.49
RGPD6-201ENST00000329516 LAMA2P24043 3122 aaKnown RBP5.71□□□□□ -1.5
RGPD6-201ENST00000329516 VCANP13611 3396 aa5.71□□□□□ -1.5
RGPD6-201ENST00000329516 RB1CC1Q8TDY2 1594 aa5.67□□□□□ -1.5
RGPD6-201ENST00000329516 PEG3Q9GZU2 1588 aa5.67□□□□□ -1.5
RGPD6-201ENST00000329516 CECR2Q9BXF3 1484 aa5.65□□□□□ -1.5
RGPD6-201ENST00000329516 LRRIQ1Q96JM4 1722 aa5.63□□□□□ -1.51
RGPD6-201ENST00000329516 XIRP2A4UGR9 3374 aa5.63□□□□□ -1.51
RGPD6-201ENST00000329516 MROH2BQ7Z745 1585 aa5.61□□□□□ -1.51
RGPD6-201ENST00000329516 UNC80Q8N2C7 3258 aa5.61□□□□□ -1.51
RGPD6-201ENST00000329516 KDM5BQ9UGL1 1544 aa5.59□□□□□ -1.51
RGPD6-201ENST00000329516 WIZO95785 1651 aa5.57□□□□□ -1.52
RGPD6-201ENST00000329516 RSF1Q96T23 1441 aaPredicted RBP5.56□□□□□ -1.52
RGPD6-201ENST00000329516 WDFY3Q8IZQ1 3526 aa5.56□□□□□ -1.52
RGPD6-201ENST00000329516 DENND4BO75064 1496 aaPredicted RBP5.54□□□□□ -1.52
RGPD6-201ENST00000329516 CDH23Q9H251 3354 aa5.53□□□□□ -1.52
RGPD6-201ENST00000329516 CEP350Q5VT06 3117 aa5.51□□□□□ -1.53
RGPD6-201ENST00000329516 MYO15AQ9UKN7 3530 aa5.51□□□□□ -1.53
RGPD6-201ENST00000329516 DNAH14Q0VDD8 3507 aa5.49□□□□□ -1.53
RGPD6-201ENST00000329516 SMARCA2P51531 1590 aa5.46□□□□□ -1.53
RGPD6-201ENST00000329516 RUSC2Q8N2Y8 1516 aa5.46□□□□□ -1.54
RGPD6-201ENST00000329516 EYSQ5T1H1 3165 aa5.43□□□□□ -1.54
RGPD6-201ENST00000329516 BAZ1AQ9NRL2 1556 aaPredicted RBP5.42□□□□□ -1.54
RGPD6-201ENST00000329516 CFAP54Q96N23 3096 aa5.41□□□□□ -1.54
RGPD6-201ENST00000329516 REV3LO60673 3130 aa5.39□□□□□ -1.55
RGPD6-201ENST00000329516 MUC3AQ02505 3323 aa5.39□□□□□ -1.55
RGPD6-201ENST00000329516 SYNJ1O43426 1573 aa5.39□□□□□ -1.55
RGPD6-201ENST00000329516 SPEGQ15772 3267 aa5.38□□□□□ -1.55
RGPD6-201ENST00000329516 WDR97A6NE52 1622 aa5.38□□□□□ -1.55
RGPD6-201ENST00000329516 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
RGPD6-201ENST00000329516 MKI67P46013 3256 aaKnown RBP5.34□□□□□ -1.55
RGPD6-201ENST00000329516 SMARCA4P51532 1647 aa5.33□□□□□ -1.56
RGPD6-201ENST00000329516 SZT2Q5T011 3432 aa5.32□□□□□ -1.56
RGPD6-201ENST00000329516 TOP2BQ02880 1626 aa5.31□□□□□ -1.56
RGPD6-201ENST00000329516 CHIC1Q5VXU3 224 aa5.31□□□□□ -1.56
RGPD6-201ENST00000329516 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
RGPD6-201ENST00000329516 DNAH12Q6ZR08 3092 aa5.3□□□□□ -1.56
RGPD6-201ENST00000329516 ABCC8Q09428 1581 aa5.3□□□□□ -1.56
RGPD6-201ENST00000329516 BPTFQ12830 3046 aa5.29□□□□□ -1.56
RGPD6-201ENST00000329516 BIVM-ERCC5R4GMW8 1640 aa5.29□□□□□ -1.56
RGPD6-201ENST00000329516 HTTP42858 3142 aa5.29□□□□□ -1.56
RGPD6-201ENST00000329516 DNAJC5BQ9UF47 199 aa5.29□□□□□ -1.56
RGPD6-201ENST00000329516 SPTBN5Q9NRC6 3674 aaKnown RBP5.27□□□□□ -1.57
RGPD6-201ENST00000329516 DMDP11532 3685 aa5.26□□□□□ -1.57
RGPD6-201ENST00000329516 RANBP2P49792 3224 aaKnown RBP5.26□□□□□ -1.57
RGPD6-201ENST00000329516 PRDM2Q13029 1718 aa5.2□□□□□ -1.58
RGPD6-201ENST00000329516 MAGI3Q5TCQ9 1506 aa5.2□□□□□ -1.58
RGPD6-201ENST00000329516 ARHGEF11O15085 1522 aa5.19□□□□□ -1.58
RGPD6-201ENST00000329516 TOP2AP11388 1531 aaKnown RBP5.19□□□□□ -1.58
RGPD6-201ENST00000329516 CFAP43Q8NDM7 1665 aa5.18□□□□□ -1.58
RGPD6-201ENST00000329516 SPENQ96T58 3664 aaKnown RBP5.18□□□□□ -1.58
RGPD6-201ENST00000329516 CUX2O14529 1486 aa5.17□□□□□ -1.58
RGPD6-201ENST00000329516 KDM6BO15054 1643 aa5.17□□□□□ -1.58
RGPD6-201ENST00000329516 MAPKBP1O60336 1514 aa5.16□□□□□ -1.58
RGPD6-201ENST00000329516 WRNQ14191 1432 aaPredicted RBP eCLIP5.16□□□□□ -1.58
RGPD6-201ENST00000329516 CUX1P39880 1505 aa5.15□□□□□ -1.59
RGPD6-201ENST00000329516 SOGA1O94964 1423 aa5.15□□□□□ -1.59
RGPD6-201ENST00000329516 PRXQ9BXM0 1461 aa5.15□□□□□ -1.59
RGPD6-201ENST00000329516 TARBP1Q13395 1621 aaKnown RBP5.11□□□□□ -1.59
RGPD6-201ENST00000329516 LOC400499M0QZD8 3231 aa5.11□□□□□ -1.59
RGPD6-201ENST00000329516 WDFY4Q6ZS81 3184 aa5.09□□□□□ -1.59
RGPD6-201ENST00000329516 SIGLEC1Q9BZZ2 1709 aa5.08□□□□□ -1.6
RGPD6-201ENST00000329516 PPARGC1BQ86YN6 1023 aaKnown RBP5.08□□□□□ -1.6
RGPD6-201ENST00000329516 ARAP1Q96P48 1450 aa5.08□□□□□ -1.6
RGPD6-201ENST00000329516 COL6A3P12111 3177 aa5.08□□□□□ -1.6
RGPD6-201ENST00000329516 PRUNE2Q8WUY3 3088 aa5.07□□□□□ -1.6
RGPD6-201ENST00000329516 ATAD2BQ9ULI0 1458 aa5.07□□□□□ -1.6
RGPD6-201ENST00000329516 KIF21BO75037 1637 aa5.07□□□□□ -1.6
RGPD6-201ENST00000329516 ABCA5Q8WWZ7 1642 aa5.06□□□□□ -1.6
RGPD6-201ENST00000329516 PTPRKQ15262 1439 aa5.06□□□□□ -1.6
RGPD6-201ENST00000329516 FRYLO94915 3013 aa5.05□□□□□ -1.6
RGPD6-201ENST00000329516 AQRO60306 1485 aaKnown RBP eCLIP5.04□□□□□ -1.6
RGPD6-201ENST00000329516 SAMD9Q5K651 1589 aa5.04□□□□□ -1.6
RGPD6-201ENST00000329516 SNAPC4Q5SXM2 1469 aa5.04□□□□□ -1.6
RGPD6-201ENST00000329516 LOC105371045A0A1W2PR82 267 aa5.03□□□□□ -1.6
RGPD6-201ENST00000329516 COL17A1Q9UMD9 1497 aaPredicted RBP5.03□□□□□ -1.6
RGPD6-201ENST00000329516 SHROOM4Q9ULL8 1493 aa5.02□□□□□ -1.61
RGPD6-201ENST00000329516 ASPMQ8IZT6 3477 aa5.02□□□□□ -1.61
RGPD6-201ENST00000329516 HMGXB3Q12766 1538 aa5.01□□□□□ -1.61
RGPD6-201ENST00000329516 ZFHX4Q86UP3 3567 aa5□□□□□ -1.61
RGPD6-201ENST00000329516 CFTRP13569 1480 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms