RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.61
DNMT3B-202ENST00000328111 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
DNMT3B-202ENST00000328111 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
DNMT3B-202ENST00000328111 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
DNMT3B-202ENST00000328111 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
DNMT3B-202ENST00000328111 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
DNMT3B-202ENST00000328111 PCGF6Q9BYE7 350 aa22.05■■□□□ 1.12
DNMT3B-202ENST00000328111 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
DNMT3B-202ENST00000328111 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
DNMT3B-202ENST00000328111 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
DNMT3B-202ENST00000328111 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
DNMT3B-202ENST00000328111 APLP2Q06481 763 aa21.41■■□□□ 1.02
DNMT3B-202ENST00000328111 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
DNMT3B-202ENST00000328111 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
DNMT3B-202ENST00000328111 HRCP23327 699 aa21.23■□□□□ 0.99
DNMT3B-202ENST00000328111 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
DNMT3B-202ENST00000328111 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
DNMT3B-202ENST00000328111 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.99
DNMT3B-202ENST00000328111 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
DNMT3B-202ENST00000328111 ABCC9O60706 1549 aa20.99■□□□□ 0.95
DNMT3B-202ENST00000328111 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
DNMT3B-202ENST00000328111 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
DNMT3B-202ENST00000328111 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
DNMT3B-202ENST00000328111 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
DNMT3B-202ENST00000328111 PELP1Q8IZL8 1130 aaKnown RBP20.63■□□□□ 0.89
DNMT3B-202ENST00000328111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
DNMT3B-202ENST00000328111 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
DNMT3B-202ENST00000328111 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
DNMT3B-202ENST00000328111 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
DNMT3B-202ENST00000328111 ITGAEP38570 1179 aa20.48■□□□□ 0.87
DNMT3B-202ENST00000328111 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
DNMT3B-202ENST00000328111 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
DNMT3B-202ENST00000328111 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
DNMT3B-202ENST00000328111 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
DNMT3B-202ENST00000328111 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
DNMT3B-202ENST00000328111 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
DNMT3B-202ENST00000328111 NEFLP07196 543 aa20.02■□□□□ 0.79
DNMT3B-202ENST00000328111 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
DNMT3B-202ENST00000328111 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
DNMT3B-202ENST00000328111 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
DNMT3B-202ENST00000328111 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
DNMT3B-202ENST00000328111 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
DNMT3B-202ENST00000328111 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
DNMT3B-202ENST00000328111 POLR3GLQ9BT43 218 aa19.81■□□□□ 0.76
DNMT3B-202ENST00000328111 NACADO15069 1562 aa19.79■□□□□ 0.76
DNMT3B-202ENST00000328111 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
DNMT3B-202ENST00000328111 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
DNMT3B-202ENST00000328111 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
DNMT3B-202ENST00000328111 ACIN1Q9UKV3 1341 aaKnown RBP19.72■□□□□ 0.75
DNMT3B-202ENST00000328111 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
DNMT3B-202ENST00000328111 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
DNMT3B-202ENST00000328111 CLIP1P30622 1438 aa19.6■□□□□ 0.73
DNMT3B-202ENST00000328111 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
DNMT3B-202ENST00000328111 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
DNMT3B-202ENST00000328111 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
DNMT3B-202ENST00000328111 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
DNMT3B-202ENST00000328111 MYT1LQ9UL68 1186 aa19.54■□□□□ 0.72
DNMT3B-202ENST00000328111 EEA1Q15075 1411 aa19.54■□□□□ 0.72
DNMT3B-202ENST00000328111 FBLN2P98095 1184 aa19.51■□□□□ 0.71
DNMT3B-202ENST00000328111 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
DNMT3B-202ENST00000328111 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
DNMT3B-202ENST00000328111 BCANQ96GW7 911 aa19.49■□□□□ 0.71
DNMT3B-202ENST00000328111 ANP32CO43423 234 aa19.47■□□□□ 0.71
DNMT3B-202ENST00000328111 SOGA1O94964 1423 aa19.46■□□□□ 0.71
DNMT3B-202ENST00000328111 MYT1Q01538 1121 aa19.45■□□□□ 0.7
DNMT3B-202ENST00000328111 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
DNMT3B-202ENST00000328111 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
DNMT3B-202ENST00000328111 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
DNMT3B-202ENST00000328111 MIER1Q8N108 512 aa19.39■□□□□ 0.69
DNMT3B-202ENST00000328111 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
DNMT3B-202ENST00000328111 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
DNMT3B-202ENST00000328111 DDX10Q13206 875 aaKnown RBP19.34■□□□□ 0.69
DNMT3B-202ENST00000328111 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
DNMT3B-202ENST00000328111 WIZO95785 1651 aa19.3■□□□□ 0.68
DNMT3B-202ENST00000328111 ZNF777Q9ULD5 760 aaPredicted RBP19.29■□□□□ 0.68
DNMT3B-202ENST00000328111 CHIC2Q9UKJ5 165 aa19.27■□□□□ 0.68
DNMT3B-202ENST00000328111 TONSLQ96HA7 1378 aa19.27■□□□□ 0.67
DNMT3B-202ENST00000328111 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
DNMT3B-202ENST00000328111 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
DNMT3B-202ENST00000328111 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
DNMT3B-202ENST00000328111 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
DNMT3B-202ENST00000328111 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
DNMT3B-202ENST00000328111 FKBP8Q14318 412 aa19.11■□□□□ 0.65
DNMT3B-202ENST00000328111 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
DNMT3B-202ENST00000328111 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
DNMT3B-202ENST00000328111 HNRNPUQ00839 825 aaKnown RBP eCLIP19.07■□□□□ 0.64
DNMT3B-202ENST00000328111 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
DNMT3B-202ENST00000328111 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
DNMT3B-202ENST00000328111 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
DNMT3B-202ENST00000328111 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
DNMT3B-202ENST00000328111 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
DNMT3B-202ENST00000328111 CUX2O14529 1486 aa19■□□□□ 0.63
DNMT3B-202ENST00000328111 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
DNMT3B-202ENST00000328111 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
DNMT3B-202ENST00000328111 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
DNMT3B-202ENST00000328111 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
DNMT3B-202ENST00000328111 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
DNMT3B-202ENST00000328111 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
DNMT3B-202ENST00000328111 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
DNMT3B-202ENST00000328111 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms