RNA–Protein interactions for RNA: ENST00000326932.8

DKK3-201, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DKK3, Length 2,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-201ENST00000326932 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
DKK3-201ENST00000326932 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
DKK3-201ENST00000326932 SUPT5HO00267 1087 aaKnown RBP30.98■■■□□ 2.55
DKK3-201ENST00000326932 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
DKK3-201ENST00000326932 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
DKK3-201ENST00000326932 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.5
DKK3-201ENST00000326932 CHIC1Q5VXU3 224 aa29.97■■■□□ 2.39
DKK3-201ENST00000326932 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
DKK3-201ENST00000326932 DCAF1Q9Y4B6 1507 aa29.62■■■□□ 2.33
DKK3-201ENST00000326932 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
DKK3-201ENST00000326932 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.28
DKK3-201ENST00000326932 HRCP23327 699 aa29.11■■■□□ 2.25
DKK3-201ENST00000326932 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
DKK3-201ENST00000326932 ABCC9O60706 1549 aa28.97■■■□□ 2.23
DKK3-201ENST00000326932 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
DKK3-201ENST00000326932 PPARGC1BQ86YN6 1023 aaKnown RBP28.78■■■□□ 2.2
DKK3-201ENST00000326932 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
DKK3-201ENST00000326932 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.19
DKK3-201ENST00000326932 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.17
DKK3-201ENST00000326932 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
DKK3-201ENST00000326932 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
DKK3-201ENST00000326932 TRIM26Q12899 539 aaPredicted RBP28.48■■■□□ 2.15
DKK3-201ENST00000326932 NACADO15069 1562 aa28.43■■■□□ 2.14
DKK3-201ENST00000326932 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
DKK3-201ENST00000326932 WIZO95785 1651 aa28.25■■■□□ 2.11
DKK3-201ENST00000326932 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.05
DKK3-201ENST00000326932 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
DKK3-201ENST00000326932 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
DKK3-201ENST00000326932 ZEB1P37275 1124 aaPredicted RBP27.73■■■□□ 2.03
DKK3-201ENST00000326932 CCDC88BA6NC98 1476 aa27.71■■■□□ 2.03
DKK3-201ENST00000326932 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
DKK3-201ENST00000326932 TTBK1Q5TCY1 1321 aaPredicted RBP27.67■■■□□ 2.02
DKK3-201ENST00000326932 SMARCA4P51532 1647 aa27.66■■■□□ 2.02
DKK3-201ENST00000326932 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
DKK3-201ENST00000326932 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
DKK3-201ENST00000326932 SMARCA2P51531 1590 aa27.56■■■□□ 2
DKK3-201ENST00000326932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
DKK3-201ENST00000326932 SOGA1O94964 1423 aa27.54■■■□□ 2
DKK3-201ENST00000326932 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
DKK3-201ENST00000326932 UBTFP17480 764 aaKnown RBP27.39■■□□□ 1.98
DKK3-201ENST00000326932 CCER1Q8TC90 406 aaPredicted RBP27.39■■□□□ 1.98
DKK3-201ENST00000326932 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
DKK3-201ENST00000326932 CEP162Q5TB80 1403 aa27.34■■□□□ 1.97
DKK3-201ENST00000326932 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
DKK3-201ENST00000326932 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
DKK3-201ENST00000326932 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
DKK3-201ENST00000326932 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
DKK3-201ENST00000326932 EEA1Q15075 1411 aa27.07■■□□□ 1.92
DKK3-201ENST00000326932 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
DKK3-201ENST00000326932 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
DKK3-201ENST00000326932 SYNJ1O43426 1573 aa27.01■■□□□ 1.91
DKK3-201ENST00000326932 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
DKK3-201ENST00000326932 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
DKK3-201ENST00000326932 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
DKK3-201ENST00000326932 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
DKK3-201ENST00000326932 DIEXFQ68CQ4 756 aaKnown RBP26.85■■□□□ 1.89
DKK3-201ENST00000326932 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
DKK3-201ENST00000326932 CLIP1P30622 1438 aa26.82■■□□□ 1.88
DKK3-201ENST00000326932 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
DKK3-201ENST00000326932 KIF21BO75037 1637 aa26.7■■□□□ 1.87
DKK3-201ENST00000326932 APLP2Q06481 763 aa26.7■■□□□ 1.86
DKK3-201ENST00000326932 NEUROD1Q13562 356 aa26.69■■□□□ 1.86
DKK3-201ENST00000326932 VPS8Q8N3P4 1428 aa26.63■■□□□ 1.85
DKK3-201ENST00000326932 ACIN1Q9UKV3 1341 aaKnown RBP26.61■■□□□ 1.85
DKK3-201ENST00000326932 ZNF316A6NFI3 1004 aaPredicted RBP26.57■■□□□ 1.84
DKK3-201ENST00000326932 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
DKK3-201ENST00000326932 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
DKK3-201ENST00000326932 GTF3C3Q9Y5Q9 886 aa26.41■■□□□ 1.82
DKK3-201ENST00000326932 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
DKK3-201ENST00000326932 YTHDC1Q96MU7 727 aaKnown RBP26.41■■□□□ 1.82
DKK3-201ENST00000326932 CUX1P39880 1505 aa26.4■■□□□ 1.82
DKK3-201ENST00000326932 PRXQ9BXM0 1461 aa26.39■■□□□ 1.81
DKK3-201ENST00000326932 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
DKK3-201ENST00000326932 CENPBP07199 599 aaPredicted RBP26.37■■□□□ 1.81
DKK3-201ENST00000326932 MIER1Q8N108 512 aa26.34■■□□□ 1.81
DKK3-201ENST00000326932 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
DKK3-201ENST00000326932 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
DKK3-201ENST00000326932 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
DKK3-201ENST00000326932 ERICH3Q5RHP9 1530 aa26.26■■□□□ 1.79
DKK3-201ENST00000326932 CFTRP13569 1480 aa26.25■■□□□ 1.79
DKK3-201ENST00000326932 ITGAEP38570 1179 aa26.24■■□□□ 1.79
DKK3-201ENST00000326932 DHX57Q6P158 1386 aaKnown RBP26.14■■□□□ 1.77
DKK3-201ENST00000326932 ARHGAP35Q9NRY4 1499 aa26.12■■□□□ 1.77
DKK3-201ENST00000326932 CUX2O14529 1486 aa26.11■■□□□ 1.77
DKK3-201ENST00000326932 IGF1RP08069 1367 aa26.09■■□□□ 1.77
DKK3-201ENST00000326932 PELP1Q8IZL8 1130 aaKnown RBP26.08■■□□□ 1.77
DKK3-201ENST00000326932 P3H3Q8IVL6 736 aa26.05■■□□□ 1.76
DKK3-201ENST00000326932 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
DKK3-201ENST00000326932 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
DKK3-201ENST00000326932 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
DKK3-201ENST00000326932 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
DKK3-201ENST00000326932 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
DKK3-201ENST00000326932 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
DKK3-201ENST00000326932 CLSPNQ9HAW4 1339 aa25.92■■□□□ 1.74
DKK3-201ENST00000326932 FAM50AQ14320 339 aaKnown RBP25.84■■□□□ 1.73
DKK3-201ENST00000326932 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
DKK3-201ENST00000326932 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
DKK3-201ENST00000326932 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
DKK3-201ENST00000326932 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
DKK3-201ENST00000326932 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms