RNA–Protein interactions for RNA: ENST00000317257.12

SETDB2-202, Transcript of SET domain bifurcated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SETDB2, Length 5,619 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB2-202ENST00000317257 CHIC1Q5VXU3 224 aa9.01□□□□□ -0.97
SETDB2-202ENST00000317257 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
SETDB2-202ENST00000317257 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
SETDB2-202ENST00000317257 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
SETDB2-202ENST00000317257 PHF23Q9BUL5 403 aaPredicted RBP8.18□□□□□ -1.1
SETDB2-202ENST00000317257 PLPPR3Q6T4P5 718 aa8.04□□□□□ -1.12
SETDB2-202ENST00000317257 RTN4Q9NQC3 1192 aaKnown RBP7.85□□□□□ -1.15
SETDB2-202ENST00000317257 KCNA4P22459 653 aa7.78□□□□□ -1.16
SETDB2-202ENST00000317257 CSRNP3Q8WYN3 585 aa7.78□□□□□ -1.16
SETDB2-202ENST00000317257 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
SETDB2-202ENST00000317257 NCBP3Q53F19 620 aaKnown RBP7.6□□□□□ -1.19
SETDB2-202ENST00000317257 PRKCSHP14314 528 aaPredicted RBP7.5□□□□□ -1.21
SETDB2-202ENST00000317257 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
SETDB2-202ENST00000317257 SLC4A1APQ9BWU0 796 aaKnown RBP7.41□□□□□ -1.22
SETDB2-202ENST00000317257 ADRA2BP18089 450 aa7.36□□□□□ -1.23
SETDB2-202ENST00000317257 ZBTB22O15209 634 aa7.27□□□□□ -1.25
SETDB2-202ENST00000317257 TIMELESSQ9UNS1 1208 aa7.27□□□□□ -1.25
SETDB2-202ENST00000317257 TAOK2Q9UL54 1235 aa7.21□□□□□ -1.25
SETDB2-202ENST00000317257 ARXQ96QS3 562 aa7.17□□□□□ -1.26
SETDB2-202ENST00000317257 TULP1O00294 542 aaPredicted RBP7.11□□□□□ -1.27
SETDB2-202ENST00000317257 TPRNQ4KMQ1 711 aa7.11□□□□□ -1.27
SETDB2-202ENST00000317257 BCANQ96GW7 911 aa7.08□□□□□ -1.28
SETDB2-202ENST00000317257 PLCB2Q00722 1185 aa7.07□□□□□ -1.28
SETDB2-202ENST00000317257 HAP1P54257 671 aaPredicted RBP7.04□□□□□ -1.28
SETDB2-202ENST00000317257 NPM3O75607 178 aaKnown RBP6.97□□□□□ -1.29
SETDB2-202ENST00000317257 HOMEZQ8IX15 550 aa6.95□□□□□ -1.3
SETDB2-202ENST00000317257 PPP6R1Q9UPN7 881 aa6.94□□□□□ -1.3
SETDB2-202ENST00000317257 GTF3C3Q9Y5Q9 886 aa6.94□□□□□ -1.3
SETDB2-202ENST00000317257 FKBP8Q14318 412 aa6.93□□□□□ -1.3
SETDB2-202ENST00000317257 PPP4R3CPQ6ZMV5 832 aa6.87□□□□□ -1.31
SETDB2-202ENST00000317257 APLP2Q06481 763 aa6.87□□□□□ -1.31
SETDB2-202ENST00000317257 SENP3Q9H4L4 574 aaPredicted RBP6.87□□□□□ -1.31
SETDB2-202ENST00000317257 KDM2AQ9Y2K7 1162 aa6.84□□□□□ -1.31
SETDB2-202ENST00000317257 MYT1Q01538 1121 aa6.84□□□□□ -1.32
SETDB2-202ENST00000317257 KLHL34Q8N239 644 aa6.82□□□□□ -1.32
SETDB2-202ENST00000317257 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
SETDB2-202ENST00000317257 RANGAP1P46060 587 aaPredicted RBP6.8□□□□□ -1.32
SETDB2-202ENST00000317257 FBLN2P98095 1184 aa6.8□□□□□ -1.32
SETDB2-202ENST00000317257 TMEM132AQ24JP5 1023 aa6.8□□□□□ -1.32
SETDB2-202ENST00000317257 PODXL2Q9NZ53 605 aa6.78□□□□□ -1.32
SETDB2-202ENST00000317257 FOXD4L1Q9NU39 408 aa6.75□□□□□ -1.33
SETDB2-202ENST00000317257 C14orf37Q86TY3 774 aa6.69□□□□□ -1.34
SETDB2-202ENST00000317257 NPM2Q86SE8 214 aaKnown RBP6.67□□□□□ -1.34
SETDB2-202ENST00000317257 DCAF8L2P0C7V8 631 aa6.66□□□□□ -1.34
SETDB2-202ENST00000317257 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
SETDB2-202ENST00000317257 PELP1Q8IZL8 1130 aaKnown RBP6.63□□□□□ -1.35
SETDB2-202ENST00000317257 ERICH6Q7L0X2 663 aa6.61□□□□□ -1.35
SETDB2-202ENST00000317257 HRCP23327 699 aa6.59□□□□□ -1.35
SETDB2-202ENST00000317257 TTBK1Q5TCY1 1321 aaPredicted RBP6.59□□□□□ -1.35
SETDB2-202ENST00000317257 SUPT5HO00267 1087 aaKnown RBP6.59□□□□□ -1.35
SETDB2-202ENST00000317257 UBTFP17480 764 aaKnown RBP6.56□□□□□ -1.36
SETDB2-202ENST00000317257 NPM1P06748 294 aaKnown RBP eCLIP6.53□□□□□ -1.36
SETDB2-202ENST00000317257 PAXIP1Q6ZW49 1069 aaPredicted RBP6.52□□□□□ -1.37
SETDB2-202ENST00000317257 CFAP44Q96MT7 982 aa6.51□□□□□ -1.37
SETDB2-202ENST00000317257 TSHZ2Q9NRE2 1034 aa6.49□□□□□ -1.37
SETDB2-202ENST00000317257 PKD2Q13563 968 aa6.47□□□□□ -1.37
SETDB2-202ENST00000317257 FBXO3Q9UK99 471 aa6.47□□□□□ -1.37
SETDB2-202ENST00000317257 BBXQ8WY36 941 aaPredicted RBP6.46□□□□□ -1.38
SETDB2-202ENST00000317257 FOXD1Q16676 465 aa6.45□□□□□ -1.38
SETDB2-202ENST00000317257 CNKSR2Q8WXI2 1034 aa6.43□□□□□ -1.38
SETDB2-202ENST00000317257 LOC105371045A0A1W2PR82 267 aa6.42□□□□□ -1.38
SETDB2-202ENST00000317257 EIF5BO60841 1220 aaKnown RBP6.4□□□□□ -1.39
SETDB2-202ENST00000317257 IFNLR1Q8IU57 520 aaPredicted RBP6.4□□□□□ -1.39
SETDB2-202ENST00000317257 NBR1Q14596 966 aa6.4□□□□□ -1.39
SETDB2-202ENST00000317257 TRHP20396 242 aaPredicted RBP6.39□□□□□ -1.39
SETDB2-202ENST00000317257 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.38□□□□□ -1.39
SETDB2-202ENST00000317257 DNAJC5Q9H3Z4 198 aa6.37□□□□□ -1.39
SETDB2-202ENST00000317257 ATXN8OSP0DMR3 200 aa6.36□□□□□ -1.39
SETDB2-202ENST00000317257 DNAJC5BQ9UF47 199 aa6.35□□□□□ -1.39
SETDB2-202ENST00000317257 SLC4A2P04920 1241 aa6.35□□□□□ -1.39
SETDB2-202ENST00000317257 PLEKHG5O94827 1062 aa6.3□□□□□ -1.4
SETDB2-202ENST00000317257 ATF5Q9Y2D1 282 aaPredicted RBP6.29□□□□□ -1.4
SETDB2-202ENST00000317257 VASPP50552 380 aaPredicted RBP6.29□□□□□ -1.4
SETDB2-202ENST00000317257 BRPF1P55201 1214 aaPredicted RBP6.29□□□□□ -1.4
SETDB2-202ENST00000317257 SPRYD3Q8NCJ5 442 aa6.27□□□□□ -1.41
SETDB2-202ENST00000317257 IGSF3O75054 1194 aa6.26□□□□□ -1.41
SETDB2-202ENST00000317257 ARID3AQ99856 593 aa6.24□□□□□ -1.41
SETDB2-202ENST00000317257 PIAS4Q8N2W9 510 aaPredicted RBP6.23□□□□□ -1.41
SETDB2-202ENST00000317257 RGL2O15211 777 aa6.21□□□□□ -1.42
SETDB2-202ENST00000317257 ECM2O94769 699 aaPredicted RBP6.21□□□□□ -1.42
SETDB2-202ENST00000317257 MYCNP04198 464 aaPredicted RBP6.21□□□□□ -1.42
SETDB2-202ENST00000317257 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
SETDB2-202ENST00000317257 NECTIN2Q92692 538 aa6.2□□□□□ -1.42
SETDB2-202ENST00000317257 SHROOM4Q9ULL8 1493 aa6.19□□□□□ -1.42
SETDB2-202ENST00000317257 MAPK8IP2Q13387 824 aaPredicted RBP6.18□□□□□ -1.42
SETDB2-202ENST00000317257 CCDC9Q9Y3X0 531 aaKnown RBP6.15□□□□□ -1.42
SETDB2-202ENST00000317257 YTHDC1Q96MU7 727 aaKnown RBP6.14□□□□□ -1.43
SETDB2-202ENST00000317257 ZMYND15Q9H091 742 aa6.13□□□□□ -1.43
SETDB2-202ENST00000317257 PROM2Q8N271 834 aa6.13□□□□□ -1.43
SETDB2-202ENST00000317257 RNF216Q9NWF9 866 aaPredicted RBP6.12□□□□□ -1.43
SETDB2-202ENST00000317257 CHMP4AQ9BY43 222 aa6.11□□□□□ -1.43
SETDB2-202ENST00000317257 SPDYE4A6NLX3 237 aa6.11□□□□□ -1.43
SETDB2-202ENST00000317257 SAMD1Q6SPF0 538 aaPredicted RBP6.11□□□□□ -1.43
SETDB2-202ENST00000317257 CCER1Q8TC90 406 aaPredicted RBP6.11□□□□□ -1.43
SETDB2-202ENST00000317257 ZBTB7CA1YPR0 619 aa6.09□□□□□ -1.43
SETDB2-202ENST00000317257 ARID3CA6NKF2 412 aa6.09□□□□□ -1.43
SETDB2-202ENST00000317257 NEUROD2Q15784 382 aa6.09□□□□□ -1.43
SETDB2-202ENST00000317257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.08□□□□□ -1.44
SETDB2-202ENST00000317257 CHGAP10645 457 aaKnown RBP6.08□□□□□ -1.44
SETDB2-202ENST00000317257 RSPH6AQ9H0K4 717 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms