RNA–Protein interactions for RNA: ENST00000315073.9

TRIM41-201, Transcript of tripartite motif containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM41, Length 3,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-201ENST00000315073 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
TRIM41-201ENST00000315073 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
TRIM41-201ENST00000315073 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
TRIM41-201ENST00000315073 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
TRIM41-201ENST00000315073 CCDC180Q9P1Z9 1646 aa24.79■■□□□ 1.56
TRIM41-201ENST00000315073 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
TRIM41-201ENST00000315073 HRCP23327 699 aa24.32■■□□□ 1.48
TRIM41-201ENST00000315073 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
TRIM41-201ENST00000315073 PCGF6Q9BYE7 350 aa24■■□□□ 1.43
TRIM41-201ENST00000315073 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
TRIM41-201ENST00000315073 ABCC9O60706 1549 aa23.88■■□□□ 1.41
TRIM41-201ENST00000315073 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
TRIM41-201ENST00000315073 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.4
TRIM41-201ENST00000315073 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
TRIM41-201ENST00000315073 MYT1Q01538 1121 aa23.45■■□□□ 1.34
TRIM41-201ENST00000315073 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
TRIM41-201ENST00000315073 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
TRIM41-201ENST00000315073 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
TRIM41-201ENST00000315073 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
TRIM41-201ENST00000315073 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
TRIM41-201ENST00000315073 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
TRIM41-201ENST00000315073 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
TRIM41-201ENST00000315073 NACADO15069 1562 aa23.23■■□□□ 1.31
TRIM41-201ENST00000315073 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
TRIM41-201ENST00000315073 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRIM41-201ENST00000315073 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
TRIM41-201ENST00000315073 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
TRIM41-201ENST00000315073 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
TRIM41-201ENST00000315073 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
TRIM41-201ENST00000315073 WIZO95785 1651 aa22.68■■□□□ 1.22
TRIM41-201ENST00000315073 GTF3C3Q9Y5Q9 886 aa22.65■■□□□ 1.22
TRIM41-201ENST00000315073 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
TRIM41-201ENST00000315073 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.21
TRIM41-201ENST00000315073 BAZ1AQ9NRL2 1556 aaPredicted RBP22.62■■□□□ 1.21
TRIM41-201ENST00000315073 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
TRIM41-201ENST00000315073 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
TRIM41-201ENST00000315073 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.17
TRIM41-201ENST00000315073 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
TRIM41-201ENST00000315073 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
TRIM41-201ENST00000315073 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
TRIM41-201ENST00000315073 YTHDC1Q96MU7 727 aaKnown RBP22.25■■□□□ 1.15
TRIM41-201ENST00000315073 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
TRIM41-201ENST00000315073 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
TRIM41-201ENST00000315073 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
TRIM41-201ENST00000315073 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
TRIM41-201ENST00000315073 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
TRIM41-201ENST00000315073 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
TRIM41-201ENST00000315073 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
TRIM41-201ENST00000315073 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
TRIM41-201ENST00000315073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
TRIM41-201ENST00000315073 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
TRIM41-201ENST00000315073 SOGA1O94964 1423 aa22.06■■□□□ 1.12
TRIM41-201ENST00000315073 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.114e-9■■□□□ 14.1
TRIM41-201ENST00000315073 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
TRIM41-201ENST00000315073 APLP2Q06481 763 aa21.97■■□□□ 1.11
TRIM41-201ENST00000315073 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.09
TRIM41-201ENST00000315073 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
TRIM41-201ENST00000315073 BCL11AQ9H165 835 aa21.86■■□□□ 1.09
TRIM41-201ENST00000315073 EEA1Q15075 1411 aa21.83■■□□□ 1.09
TRIM41-201ENST00000315073 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
TRIM41-201ENST00000315073 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
TRIM41-201ENST00000315073 GOLGA3Q08378 1498 aa21.73■■□□□ 1.07
TRIM41-201ENST00000315073 HNRNPUL2Q1KMD3 747 aaKnown RBP21.7■■□□□ 1.06
TRIM41-201ENST00000315073 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
TRIM41-201ENST00000315073 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
TRIM41-201ENST00000315073 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
TRIM41-201ENST00000315073 CLIP1P30622 1438 aa21.61■■□□□ 1.05
TRIM41-201ENST00000315073 ANP32EQ9BTT0 268 aa21.6■■□□□ 1.05
TRIM41-201ENST00000315073 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
TRIM41-201ENST00000315073 NCAPD3P42695 1498 aa21.55■■□□□ 1.04
TRIM41-201ENST00000315073 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.03
TRIM41-201ENST00000315073 MIER1Q8N108 512 aa21.5■■□□□ 1.03
TRIM41-201ENST00000315073 RAPGEF2Q9Y4G8 1499 aa21.49■■□□□ 1.03
TRIM41-201ENST00000315073 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
TRIM41-201ENST00000315073 ITGAEP38570 1179 aa21.39■■□□□ 1.02
TRIM41-201ENST00000315073 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
TRIM41-201ENST00000315073 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
TRIM41-201ENST00000315073 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
TRIM41-201ENST00000315073 VPS8Q8N3P4 1428 aa21.33■■□□□ 1
TRIM41-201ENST00000315073 TOP2BQ02880 1626 aa21.33■■□□□ 1
TRIM41-201ENST00000315073 CFTRP13569 1480 aa21.31■■□□□ 1
TRIM41-201ENST00000315073 KIF21BO75037 1637 aa21.29■■□□□ 1
TRIM41-201ENST00000315073 CUX2O14529 1486 aa21.28■■□□□ 1
TRIM41-201ENST00000315073 SUPT16HQ9Y5B9 1047 aaKnown RBP21.28■■□□□ 1
TRIM41-201ENST00000315073 CUX1P39880 1505 aa21.26■□□□□ 0.99
TRIM41-201ENST00000315073 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
TRIM41-201ENST00000315073 BCANQ96GW7 911 aa21.24■□□□□ 0.99
TRIM41-201ENST00000315073 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
TRIM41-201ENST00000315073 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
TRIM41-201ENST00000315073 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
TRIM41-201ENST00000315073 ERICH6Q7L0X2 663 aa21.15■□□□□ 0.98
TRIM41-201ENST00000315073 PRXQ9BXM0 1461 aa21.14■□□□□ 0.97
TRIM41-201ENST00000315073 CLSPNQ9HAW4 1339 aa21.13■□□□□ 0.97
TRIM41-201ENST00000315073 PRKCSHP14314 528 aaPredicted RBP21.12■□□□□ 0.97
TRIM41-201ENST00000315073 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
TRIM41-201ENST00000315073 IGF1RP08069 1367 aa21.1■□□□□ 0.97
TRIM41-201ENST00000315073 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
TRIM41-201ENST00000315073 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
TRIM41-201ENST00000315073 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
TRIM41-201ENST00000315073 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms