RNA–Protein interactions for RNA: ENST00000311601.5

SH3PXD2B-201, Transcript of SH3 and PX domains 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3PXD2B, Length 7,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-201ENST00000311601 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
SH3PXD2B-201ENST00000311601 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
SH3PXD2B-201ENST00000311601 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
SH3PXD2B-201ENST00000311601 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
SH3PXD2B-201ENST00000311601 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
SH3PXD2B-201ENST00000311601 APLP2Q06481 763 aa21.47■■□□□ 1.03
SH3PXD2B-201ENST00000311601 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
SH3PXD2B-201ENST00000311601 RANGAP1P46060 587 aaPredicted RBP21.26■□□□□ 0.99
SH3PXD2B-201ENST00000311601 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
SH3PXD2B-201ENST00000311601 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
SH3PXD2B-201ENST00000311601 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SH3PXD2B-201ENST00000311601 UBTFP17480 764 aaKnown RBP20.7■□□□□ 0.9
SH3PXD2B-201ENST00000311601 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
SH3PXD2B-201ENST00000311601 PCGF6Q9BYE7 350 aa20.65■□□□□ 0.9
SH3PXD2B-201ENST00000311601 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
SH3PXD2B-201ENST00000311601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
SH3PXD2B-201ENST00000311601 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
SH3PXD2B-201ENST00000311601 CCER1Q8TC90 406 aaPredicted RBP20.37■□□□□ 0.85
SH3PXD2B-201ENST00000311601 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
SH3PXD2B-201ENST00000311601 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
SH3PXD2B-201ENST00000311601 ITGAEP38570 1179 aa20.13■□□□□ 0.81
SH3PXD2B-201ENST00000311601 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
SH3PXD2B-201ENST00000311601 ABCC9O60706 1549 aa20.06■□□□□ 0.8
SH3PXD2B-201ENST00000311601 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
SH3PXD2B-201ENST00000311601 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
SH3PXD2B-201ENST00000311601 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
SH3PXD2B-201ENST00000311601 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.78
SH3PXD2B-201ENST00000311601 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
SH3PXD2B-201ENST00000311601 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
SH3PXD2B-201ENST00000311601 YTHDC1Q96MU7 727 aaKnown RBP19.86■□□□□ 0.77
SH3PXD2B-201ENST00000311601 NEFLP07196 543 aa19.8■□□□□ 0.76
SH3PXD2B-201ENST00000311601 FBLN2P98095 1184 aa19.79■□□□□ 0.76
SH3PXD2B-201ENST00000311601 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
SH3PXD2B-201ENST00000311601 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
SH3PXD2B-201ENST00000311601 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
SH3PXD2B-201ENST00000311601 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
SH3PXD2B-201ENST00000311601 BCANQ96GW7 911 aa19.42■□□□□ 0.7
SH3PXD2B-201ENST00000311601 ARID3CA6NKF2 412 aa19.39■□□□□ 0.7
SH3PXD2B-201ENST00000311601 DAXXQ9UER7 740 aaPredicted RBP19.35■□□□□ 0.69
SH3PXD2B-201ENST00000311601 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
SH3PXD2B-201ENST00000311601 ZNF326Q5BKZ1 582 aaKnown RBP19.3■□□□□ 0.68
SH3PXD2B-201ENST00000311601 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
SH3PXD2B-201ENST00000311601 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
SH3PXD2B-201ENST00000311601 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
SH3PXD2B-201ENST00000311601 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
SH3PXD2B-201ENST00000311601 ZNF777Q9ULD5 760 aaPredicted RBP19.16■□□□□ 0.66
SH3PXD2B-201ENST00000311601 CLSPNQ9HAW4 1339 aa19.14■□□□□ 0.65
SH3PXD2B-201ENST00000311601 HRCP23327 699 aa19.1■□□□□ 0.65
SH3PXD2B-201ENST00000311601 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
SH3PXD2B-201ENST00000311601 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
SH3PXD2B-201ENST00000311601 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
SH3PXD2B-201ENST00000311601 STAG3Q9UJ98 1225 aa19■□□□□ 0.63
SH3PXD2B-201ENST00000311601 CHGAP10645 457 aaKnown RBP18.97■□□□□ 0.63
SH3PXD2B-201ENST00000311601 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
SH3PXD2B-201ENST00000311601 ZBTB47Q9UFB7 747 aaPredicted RBP18.91■□□□□ 0.62
SH3PXD2B-201ENST00000311601 NEFMP07197 916 aa18.89■□□□□ 0.62
SH3PXD2B-201ENST00000311601 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
SH3PXD2B-201ENST00000311601 MYT1Q01538 1121 aa18.85■□□□□ 0.61
SH3PXD2B-201ENST00000311601 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.6
SH3PXD2B-201ENST00000311601 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
SH3PXD2B-201ENST00000311601 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
SH3PXD2B-201ENST00000311601 ANP32CO43423 234 aa18.78■□□□□ 0.6
SH3PXD2B-201ENST00000311601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
SH3PXD2B-201ENST00000311601 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
SH3PXD2B-201ENST00000311601 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
SH3PXD2B-201ENST00000311601 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
SH3PXD2B-201ENST00000311601 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
SH3PXD2B-201ENST00000311601 A0A0G2JS52 829 aa18.64■□□□□ 0.57
SH3PXD2B-201ENST00000311601 CHIC2Q9UKJ5 165 aa18.61■□□□□ 0.57
SH3PXD2B-201ENST00000311601 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
SH3PXD2B-201ENST00000311601 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
SH3PXD2B-201ENST00000311601 ARID4BQ4LE39 1312 aaPredicted RBP18.53■□□□□ 0.56
SH3PXD2B-201ENST00000311601 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
SH3PXD2B-201ENST00000311601 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
SH3PXD2B-201ENST00000311601 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
SH3PXD2B-201ENST00000311601 C14orf37Q86TY3 774 aa18.49■□□□□ 0.55
SH3PXD2B-201ENST00000311601 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
SH3PXD2B-201ENST00000311601 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
SH3PXD2B-201ENST00000311601 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
SH3PXD2B-201ENST00000311601 ERCC6Q03468 1493 aa18.43■□□□□ 0.54
SH3PXD2B-201ENST00000311601 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
SH3PXD2B-201ENST00000311601 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
SH3PXD2B-201ENST00000311601 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
SH3PXD2B-201ENST00000311601 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.53
SH3PXD2B-201ENST00000311601 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
SH3PXD2B-201ENST00000311601 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
SH3PXD2B-201ENST00000311601 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
SH3PXD2B-201ENST00000311601 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
SH3PXD2B-201ENST00000311601 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
SH3PXD2B-201ENST00000311601 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
SH3PXD2B-201ENST00000311601 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
SH3PXD2B-201ENST00000311601 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.51
SH3PXD2B-201ENST00000311601 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
SH3PXD2B-201ENST00000311601 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.5
SH3PXD2B-201ENST00000311601 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
SH3PXD2B-201ENST00000311601 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
SH3PXD2B-201ENST00000311601 ARXQ96QS3 562 aa18.18■□□□□ 0.5
SH3PXD2B-201ENST00000311601 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
SH3PXD2B-201ENST00000311601 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
SH3PXD2B-201ENST00000311601 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms