RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 NISCHQ9Y2I1 1504 aa20.67■□□□□ 0.9
PHTF2-203ENST00000307305 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.75
PHTF2-203ENST00000307305 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
PHTF2-203ENST00000307305 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
PHTF2-203ENST00000307305 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.61
PHTF2-203ENST00000307305 PCGF6Q9BYE7 350 aa18.72■□□□□ 0.59
PHTF2-203ENST00000307305 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
PHTF2-203ENST00000307305 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
PHTF2-203ENST00000307305 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
PHTF2-203ENST00000307305 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
PHTF2-203ENST00000307305 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
PHTF2-203ENST00000307305 HRCP23327 699 aa18.13■□□□□ 0.49
PHTF2-203ENST00000307305 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
PHTF2-203ENST00000307305 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
PHTF2-203ENST00000307305 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
PHTF2-203ENST00000307305 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
PHTF2-203ENST00000307305 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
PHTF2-203ENST00000307305 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
PHTF2-203ENST00000307305 YTHDC1Q96MU7 727 aaKnown RBP17.48■□□□□ 0.39
PHTF2-203ENST00000307305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
PHTF2-203ENST00000307305 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
PHTF2-203ENST00000307305 APLP2Q06481 763 aa17.32■□□□□ 0.36
PHTF2-203ENST00000307305 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
PHTF2-203ENST00000307305 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
PHTF2-203ENST00000307305 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
PHTF2-203ENST00000307305 DIEXFQ68CQ4 756 aaKnown RBP17.09■□□□□ 0.33
PHTF2-203ENST00000307305 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
PHTF2-203ENST00000307305 ABCC9O60706 1549 aa17.04■□□□□ 0.32
PHTF2-203ENST00000307305 ITGAEP38570 1179 aa17.01■□□□□ 0.31
PHTF2-203ENST00000307305 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
PHTF2-203ENST00000307305 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
PHTF2-203ENST00000307305 ATP1B4Q9UN42 357 aaPredicted RBP17■□□□□ 0.31
PHTF2-203ENST00000307305 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
PHTF2-203ENST00000307305 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
PHTF2-203ENST00000307305 SCRIBQ14160 1630 aa16.89■□□□□ 0.3
PHTF2-203ENST00000307305 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
PHTF2-203ENST00000307305 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
PHTF2-203ENST00000307305 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
PHTF2-203ENST00000307305 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
PHTF2-203ENST00000307305 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
PHTF2-203ENST00000307305 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
PHTF2-203ENST00000307305 BCANQ96GW7 911 aa16.6■□□□□ 0.25
PHTF2-203ENST00000307305 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
PHTF2-203ENST00000307305 MIER1Q8N108 512 aa16.54■□□□□ 0.24
PHTF2-203ENST00000307305 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.24
PHTF2-203ENST00000307305 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
PHTF2-203ENST00000307305 NEFLP07196 543 aa16.46■□□□□ 0.23
PHTF2-203ENST00000307305 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
PHTF2-203ENST00000307305 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
PHTF2-203ENST00000307305 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
PHTF2-203ENST00000307305 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
PHTF2-203ENST00000307305 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
PHTF2-203ENST00000307305 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
PHTF2-203ENST00000307305 SOGA1O94964 1423 aa16.3■□□□□ 0.2
PHTF2-203ENST00000307305 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
PHTF2-203ENST00000307305 MYT1Q01538 1121 aa16.26■□□□□ 0.19
PHTF2-203ENST00000307305 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
PHTF2-203ENST00000307305 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
PHTF2-203ENST00000307305 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
PHTF2-203ENST00000307305 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
PHTF2-203ENST00000307305 CLIP1P30622 1438 aa16.18■□□□□ 0.18
PHTF2-203ENST00000307305 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
PHTF2-203ENST00000307305 FKBP8Q14318 412 aa16.15■□□□□ 0.18
PHTF2-203ENST00000307305 WIZO95785 1651 aa16.13■□□□□ 0.17
PHTF2-203ENST00000307305 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
PHTF2-203ENST00000307305 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
PHTF2-203ENST00000307305 ANP32CO43423 234 aa16.07■□□□□ 0.16
PHTF2-203ENST00000307305 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
PHTF2-203ENST00000307305 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
PHTF2-203ENST00000307305 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
PHTF2-203ENST00000307305 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.16
PHTF2-203ENST00000307305 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
PHTF2-203ENST00000307305 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
PHTF2-203ENST00000307305 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
PHTF2-203ENST00000307305 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
PHTF2-203ENST00000307305 KCNH8Q96L42 1107 aa15.94■□□□□ 0.14
PHTF2-203ENST00000307305 SUPT16HQ9Y5B9 1047 aaKnown RBP15.94■□□□□ 0.14
PHTF2-203ENST00000307305 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
PHTF2-203ENST00000307305 NACADO15069 1562 aa15.93■□□□□ 0.14
PHTF2-203ENST00000307305 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
PHTF2-203ENST00000307305 EEA1Q15075 1411 aa15.88■□□□□ 0.13
PHTF2-203ENST00000307305 FAM9BQ8IZU0 186 aa15.87■□□□□ 0.13
PHTF2-203ENST00000307305 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
PHTF2-203ENST00000307305 TONSLQ96HA7 1378 aa15.83■□□□□ 0.13
PHTF2-203ENST00000307305 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
PHTF2-203ENST00000307305 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
PHTF2-203ENST00000307305 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
PHTF2-203ENST00000307305 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
PHTF2-203ENST00000307305 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
PHTF2-203ENST00000307305 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
PHTF2-203ENST00000307305 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
PHTF2-203ENST00000307305 FBLN2P98095 1184 aa15.75■□□□□ 0.11
PHTF2-203ENST00000307305 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
PHTF2-203ENST00000307305 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
PHTF2-203ENST00000307305 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
PHTF2-203ENST00000307305 NPM2Q86SE8 214 aaKnown RBP15.67■□□□□ 0.1
PHTF2-203ENST00000307305 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
PHTF2-203ENST00000307305 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
PHTF2-203ENST00000307305 MTUS2Q5JR59 1369 aa15.66■□□□□ 0.1
PHTF2-203ENST00000307305 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms