RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.4□□□□□ -0.581e-16■■■■■ 50.9
PHTF2-203ENST00000307305 PCBP2Q15366 365 aaKnown RBP eCLIP11.07□□□□□ -0.641e-11■■■■□ 26.6
PHTF2-203ENST00000307305 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.282e-11■■■■■ 42.1
PHTF2-203ENST00000307305 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.394e-10■□□□□ 8.7
PHTF2-203ENST00000307305 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.04□□□□□ -0.643e-9■■■■■ 46
PHTF2-203ENST00000307305 QKIQ96PU8 341 aaKnown RBP eCLIP11.48□□□□□ -0.574e-9■■■■■ 62.2
PHTF2-203ENST00000307305 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.02□□□□□ -0.495e-9■■■■■ 39.9
PHTF2-203ENST00000307305 RBM22Q9NW64 420 aaKnown RBP eCLIP11.58□□□□□ -0.568e-9■■■■■ 36.9
PHTF2-203ENST00000307305 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.83□□□□□ -0.681e-8■■■■■ 31.4
PHTF2-203ENST00000307305 SF3B4Q15427 424 aaKnown RBP eCLIP10.89□□□□□ -0.672e-8■■■□□ 15.1
PHTF2-203ENST00000307305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.063e-8■■■■□ 20.1
PHTF2-203ENST00000307305 HNRNPKP61978 463 aaKnown RBP eCLIP10.24□□□□□ -0.777e-8■■□□□ 14.4
PHTF2-203ENST00000307305 ILF3Q12906 894 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■■□□ 15.2
PHTF2-203ENST00000307305 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■■■□□ 17.9
PHTF2-203ENST00000307305 U2AF1Q01081 240 aaKnown RBP eCLIP14.61□□□□□ -0.071e-7■■■■■ 44.5
PHTF2-203ENST00000307305 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■■■ 36.6
PHTF2-203ENST00000307305 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.083e-7■■■□□ 17
PHTF2-203ENST00000307305 AARSP49588 968 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■■■■ 72.1
PHTF2-203ENST00000307305 DDX3XO00571 662 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■■■■ 31.8
PHTF2-203ENST00000307305 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.364e-7■□□□□ 10.8
PHTF2-203ENST00000307305 HNRNPLP14866 589 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■■■□ 22.6
PHTF2-203ENST00000307305 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.67e-7■■■□□ 15
PHTF2-203ENST00000307305 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.2□□□□□ -0.787e-7■■■■□ 21.2
PHTF2-203ENST00000307305 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.27□□□□□ -0.447e-7■□□□□ 8.3
PHTF2-203ENST00000307305 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.017e-7■■■■□ 22.3
PHTF2-203ENST00000307305 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.38e-7■■□□□ 12
PHTF2-203ENST00000307305 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.75□□□□□ -0.859e-7■■■■■ 26.8
PHTF2-203ENST00000307305 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.379e-7■■■■■ 46.9
PHTF2-203ENST00000307305 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■■□ 21.3
PHTF2-203ENST00000307305 PTBP1P26599 531 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■■□ 23.9
PHTF2-203ENST00000307305 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.633e-6■■■■□ 24.2
PHTF2-203ENST00000307305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■■■■□ 20.6
PHTF2-203ENST00000307305 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.047e-6■□□□□ 10.4
PHTF2-203ENST00000307305 SF3B1O75533 1304 aaKnown RBP eCLIP11.36□□□□□ -0.598e-6■■■■■ 60.1
Retrieved 34 of 34 RNA–protein pairs in 12.8 ms