RNA–Protein interactions for RNA: ENST00000304613.7

KNDC1-201, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNDC1, Length 6,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-201ENST00000304613 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
KNDC1-201ENST00000304613 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
KNDC1-201ENST00000304613 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
KNDC1-201ENST00000304613 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
KNDC1-201ENST00000304613 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
KNDC1-201ENST00000304613 APLP2Q06481 763 aa22.58■■□□□ 1.2
KNDC1-201ENST00000304613 NISCHQ9Y2I1 1504 aa22.54■■□□□ 1.2
KNDC1-201ENST00000304613 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
KNDC1-201ENST00000304613 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
KNDC1-201ENST00000304613 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
KNDC1-201ENST00000304613 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
KNDC1-201ENST00000304613 ERICH6Q7L0X2 663 aa22.08■■□□□ 1.13
KNDC1-201ENST00000304613 ATP1B4Q9UN42 357 aaPredicted RBP21.98■■□□□ 1.11
KNDC1-201ENST00000304613 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
KNDC1-201ENST00000304613 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
KNDC1-201ENST00000304613 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
KNDC1-201ENST00000304613 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
KNDC1-201ENST00000304613 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
KNDC1-201ENST00000304613 NEFLP07196 543 aa21.53■■□□□ 1.04
KNDC1-201ENST00000304613 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
KNDC1-201ENST00000304613 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
KNDC1-201ENST00000304613 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
KNDC1-201ENST00000304613 POLR3GLQ9BT43 218 aa21.22■□□□□ 0.99
KNDC1-201ENST00000304613 MYT1Q01538 1121 aa21.18■□□□□ 0.98
KNDC1-201ENST00000304613 ITGAEP38570 1179 aa21.12■□□□□ 0.97
KNDC1-201ENST00000304613 CNGB1Q14028 1251 aaPredicted RBP21.11■□□□□ 0.97
KNDC1-201ENST00000304613 DAXXQ9UER7 740 aaPredicted RBP21.1■□□□□ 0.97
KNDC1-201ENST00000304613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
KNDC1-201ENST00000304613 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
KNDC1-201ENST00000304613 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
KNDC1-201ENST00000304613 SLC4A1APQ9BWU0 796 aaKnown RBP20.88■□□□□ 0.93
KNDC1-201ENST00000304613 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
KNDC1-201ENST00000304613 HRCP23327 699 aa20.71■□□□□ 0.91
KNDC1-201ENST00000304613 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
KNDC1-201ENST00000304613 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
KNDC1-201ENST00000304613 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
KNDC1-201ENST00000304613 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
KNDC1-201ENST00000304613 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
KNDC1-201ENST00000304613 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
KNDC1-201ENST00000304613 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
KNDC1-201ENST00000304613 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
KNDC1-201ENST00000304613 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
KNDC1-201ENST00000304613 BCANQ96GW7 911 aa20.29■□□□□ 0.84
KNDC1-201ENST00000304613 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
KNDC1-201ENST00000304613 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
KNDC1-201ENST00000304613 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
KNDC1-201ENST00000304613 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
KNDC1-201ENST00000304613 ABCC9O60706 1549 aa20.11■□□□□ 0.81
KNDC1-201ENST00000304613 FBLN2P98095 1184 aa20.06■□□□□ 0.8
KNDC1-201ENST00000304613 ANP32CO43423 234 aa20.05■□□□□ 0.8
KNDC1-201ENST00000304613 CANXP27824 592 aaKnown RBP20.05■□□□□ 0.8
KNDC1-201ENST00000304613 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
KNDC1-201ENST00000304613 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
KNDC1-201ENST00000304613 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
KNDC1-201ENST00000304613 NEFMP07197 916 aa19.91■□□□□ 0.78
KNDC1-201ENST00000304613 P3H3Q8IVL6 736 aa19.83■□□□□ 0.77
KNDC1-201ENST00000304613 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
KNDC1-201ENST00000304613 ZNF777Q9ULD5 760 aaPredicted RBP19.77■□□□□ 0.75
KNDC1-201ENST00000304613 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
KNDC1-201ENST00000304613 ANP32AP39687 249 aaKnown RBP19.71■□□□□ 0.75
KNDC1-201ENST00000304613 CHGAP10645 457 aaKnown RBP19.64■□□□□ 0.74
KNDC1-201ENST00000304613 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
KNDC1-201ENST00000304613 HSP90AA1P07900 732 aaKnown RBP19.62■□□□□ 0.73
KNDC1-201ENST00000304613 STAG3Q9UJ98 1225 aa19.59■□□□□ 0.73
KNDC1-201ENST00000304613 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
KNDC1-201ENST00000304613 EIF5BO60841 1220 aaKnown RBP19.56■□□□□ 0.72
KNDC1-201ENST00000304613 ANP32BQ92688 251 aaKnown RBP19.54■□□□□ 0.72
KNDC1-201ENST00000304613 FKBP8Q14318 412 aa19.49■□□□□ 0.71
KNDC1-201ENST00000304613 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
KNDC1-201ENST00000304613 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
KNDC1-201ENST00000304613 UPF2Q9HAU5 1272 aaKnown RBP19.44■□□□□ 0.7
KNDC1-201ENST00000304613 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
KNDC1-201ENST00000304613 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
KNDC1-201ENST00000304613 ARXQ96QS3 562 aa19.42■□□□□ 0.7
KNDC1-201ENST00000304613 TONSLQ96HA7 1378 aa19.38■□□□□ 0.69
KNDC1-201ENST00000304613 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
KNDC1-201ENST00000304613 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
KNDC1-201ENST00000304613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
KNDC1-201ENST00000304613 DDX10Q13206 875 aaKnown RBP19.37■□□□□ 0.69
KNDC1-201ENST00000304613 A0A0G2JS52 829 aa19.36■□□□□ 0.69
KNDC1-201ENST00000304613 PLEKHG5O94827 1062 aa19.32■□□□□ 0.68
KNDC1-201ENST00000304613 NBR1Q14596 966 aa19.31■□□□□ 0.68
KNDC1-201ENST00000304613 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
KNDC1-201ENST00000304613 CHIC2Q9UKJ5 165 aa19.3■□□□□ 0.68
KNDC1-201ENST00000304613 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
KNDC1-201ENST00000304613 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
KNDC1-201ENST00000304613 KDM2AQ9Y2K7 1162 aa19.26■□□□□ 0.67
KNDC1-201ENST00000304613 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
KNDC1-201ENST00000304613 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
KNDC1-201ENST00000304613 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
KNDC1-201ENST00000304613 IRX6P78412 446 aaPredicted RBP19.18■□□□□ 0.66
KNDC1-201ENST00000304613 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
KNDC1-201ENST00000304613 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
KNDC1-201ENST00000304613 MRS2Q9HD23 443 aa19.14■□□□□ 0.65
KNDC1-201ENST00000304613 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
KNDC1-201ENST00000304613 CDK11BP21127 795 aaKnown RBP19.13■□□□□ 0.65
KNDC1-201ENST00000304613 MYH16Q9H6N6 1097 aa19.1■□□□□ 0.65
KNDC1-201ENST00000304613 GLIPR1L2Q4G1C9 344 aa19.08■□□□□ 0.64
KNDC1-201ENST00000304613 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
KNDC1-201ENST00000304613 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms