RNA–Protein interactions for RNA: ENST00000301770.10

VWCE-201, Transcript of von Willebrand factor C and EGF domains, humanhuman

TSL 1 (best)

Gene VWCE, Length 3,368 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWCE-201ENST00000301770 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
VWCE-201ENST00000301770 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
VWCE-201ENST00000301770 DCAF8L2P0C7V8 631 aa26.01■■□□□ 1.75
VWCE-201ENST00000301770 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
VWCE-201ENST00000301770 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
VWCE-201ENST00000301770 ZCCHC6Q5VYS8 1495 aaKnown RBP24.3■■□□□ 1.48
VWCE-201ENST00000301770 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
VWCE-201ENST00000301770 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
VWCE-201ENST00000301770 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
VWCE-201ENST00000301770 FAM9AQ8IZU1 332 aaPredicted RBP24.09■■□□□ 1.45
VWCE-201ENST00000301770 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
VWCE-201ENST00000301770 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
VWCE-201ENST00000301770 PPARGC1BQ86YN6 1023 aaKnown RBP23.76■■□□□ 1.39
VWCE-201ENST00000301770 ABCC9O60706 1549 aa23.69■■□□□ 1.38
VWCE-201ENST00000301770 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
VWCE-201ENST00000301770 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
VWCE-201ENST00000301770 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
VWCE-201ENST00000301770 HRCP23327 699 aa23.5■■□□□ 1.35
VWCE-201ENST00000301770 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
VWCE-201ENST00000301770 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.298e-9■□□□□ 10.8
VWCE-201ENST00000301770 TRIM26Q12899 539 aaPredicted RBP23.07■■□□□ 1.28
VWCE-201ENST00000301770 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
VWCE-201ENST00000301770 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
VWCE-201ENST00000301770 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
VWCE-201ENST00000301770 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
VWCE-201ENST00000301770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
VWCE-201ENST00000301770 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
VWCE-201ENST00000301770 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
VWCE-201ENST00000301770 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
VWCE-201ENST00000301770 WIZO95785 1651 aa22.63■■□□□ 1.21
VWCE-201ENST00000301770 NACADO15069 1562 aa22.47■■□□□ 1.19
VWCE-201ENST00000301770 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
VWCE-201ENST00000301770 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
VWCE-201ENST00000301770 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.16
VWCE-201ENST00000301770 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
VWCE-201ENST00000301770 SOGA1O94964 1423 aa22.3■■□□□ 1.16
VWCE-201ENST00000301770 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
VWCE-201ENST00000301770 RUSC2Q8N2Y8 1516 aa22.19■■□□□ 1.14
VWCE-201ENST00000301770 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
VWCE-201ENST00000301770 APLP2Q06481 763 aa22.16■■□□□ 1.14
VWCE-201ENST00000301770 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
VWCE-201ENST00000301770 ITGAEP38570 1179 aa22.08■■□□□ 1.13
VWCE-201ENST00000301770 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
VWCE-201ENST00000301770 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
VWCE-201ENST00000301770 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
VWCE-201ENST00000301770 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
VWCE-201ENST00000301770 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
VWCE-201ENST00000301770 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
VWCE-201ENST00000301770 SMARCA2P51531 1590 aa21.89■■□□□ 1.1
VWCE-201ENST00000301770 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.09
VWCE-201ENST00000301770 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
VWCE-201ENST00000301770 NEUROD1Q13562 356 aa21.77■■□□□ 1.08
VWCE-201ENST00000301770 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
VWCE-201ENST00000301770 BAZ1BQ9UIG0 1483 aaKnown RBP21.76■■□□□ 1.07
VWCE-201ENST00000301770 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
VWCE-201ENST00000301770 CLIP1P30622 1438 aa21.71■■□□□ 1.07
VWCE-201ENST00000301770 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
VWCE-201ENST00000301770 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
VWCE-201ENST00000301770 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
VWCE-201ENST00000301770 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
VWCE-201ENST00000301770 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
VWCE-201ENST00000301770 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
VWCE-201ENST00000301770 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.05
VWCE-201ENST00000301770 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
VWCE-201ENST00000301770 SYNJ1O43426 1573 aa21.58■■□□□ 1.04
VWCE-201ENST00000301770 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
VWCE-201ENST00000301770 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
VWCE-201ENST00000301770 MIER1Q8N108 512 aa21.53■■□□□ 1.04
VWCE-201ENST00000301770 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
VWCE-201ENST00000301770 FAM50AQ14320 339 aaKnown RBP21.48■■□□□ 1.03
VWCE-201ENST00000301770 EEA1Q15075 1411 aa21.47■■□□□ 1.03
VWCE-201ENST00000301770 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
VWCE-201ENST00000301770 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
VWCE-201ENST00000301770 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
VWCE-201ENST00000301770 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
VWCE-201ENST00000301770 CUX2O14529 1486 aa21.21■□□□□ 0.99
VWCE-201ENST00000301770 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
VWCE-201ENST00000301770 KIF21BO75037 1637 aa21.19■□□□□ 0.98
VWCE-201ENST00000301770 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
VWCE-201ENST00000301770 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
VWCE-201ENST00000301770 CNGB1Q14028 1251 aaPredicted RBP21.16■□□□□ 0.98
VWCE-201ENST00000301770 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
VWCE-201ENST00000301770 CUX1P39880 1505 aa21.1■□□□□ 0.97
VWCE-201ENST00000301770 BCANQ96GW7 911 aa21.08■□□□□ 0.96
VWCE-201ENST00000301770 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
VWCE-201ENST00000301770 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
VWCE-201ENST00000301770 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
VWCE-201ENST00000301770 CHIC2Q9UKJ5 165 aa21.04■□□□□ 0.96
VWCE-201ENST00000301770 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
VWCE-201ENST00000301770 TOP2BQ02880 1626 aa21.02■□□□□ 0.95
VWCE-201ENST00000301770 DHX57Q6P158 1386 aaKnown RBP21.01■□□□□ 0.95
VWCE-201ENST00000301770 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
VWCE-201ENST00000301770 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
VWCE-201ENST00000301770 IGF1RP08069 1367 aa20.98■□□□□ 0.95
VWCE-201ENST00000301770 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
VWCE-201ENST00000301770 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
VWCE-201ENST00000301770 NESP48681 1621 aa20.96■□□□□ 0.95
VWCE-201ENST00000301770 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
VWCE-201ENST00000301770 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
VWCE-201ENST00000301770 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms