RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
BCCIP-202ENST00000299130 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
BCCIP-202ENST00000299130 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
BCCIP-202ENST00000299130 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
BCCIP-202ENST00000299130 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
BCCIP-202ENST00000299130 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
BCCIP-202ENST00000299130 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
BCCIP-202ENST00000299130 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
BCCIP-202ENST00000299130 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
BCCIP-202ENST00000299130 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
BCCIP-202ENST00000299130 ABCC9O60706 1549 aa22.64■■□□□ 1.21
BCCIP-202ENST00000299130 LOC105371045A0A1W2PR82 267 aa22.47■■□□□ 1.19
BCCIP-202ENST00000299130 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
BCCIP-202ENST00000299130 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
BCCIP-202ENST00000299130 HRCP23327 699 aa22.37■■□□□ 1.17
BCCIP-202ENST00000299130 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
BCCIP-202ENST00000299130 NACADO15069 1562 aa22.25■■□□□ 1.15
BCCIP-202ENST00000299130 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
BCCIP-202ENST00000299130 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
BCCIP-202ENST00000299130 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
BCCIP-202ENST00000299130 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
BCCIP-202ENST00000299130 WIZO95785 1651 aa21.99■■□□□ 1.11
BCCIP-202ENST00000299130 FAM9AQ8IZU1 332 aaPredicted RBP21.98■■□□□ 1.11
BCCIP-202ENST00000299130 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
BCCIP-202ENST00000299130 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
BCCIP-202ENST00000299130 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
BCCIP-202ENST00000299130 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
BCCIP-202ENST00000299130 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
BCCIP-202ENST00000299130 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
BCCIP-202ENST00000299130 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
BCCIP-202ENST00000299130 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
BCCIP-202ENST00000299130 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
BCCIP-202ENST00000299130 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
BCCIP-202ENST00000299130 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
BCCIP-202ENST00000299130 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
BCCIP-202ENST00000299130 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
BCCIP-202ENST00000299130 SOGA1O94964 1423 aa21.3■■□□□ 1
BCCIP-202ENST00000299130 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
BCCIP-202ENST00000299130 CEP162Q5TB80 1403 aa21.16■□□□□ 0.98
BCCIP-202ENST00000299130 PEG3Q9GZU2 1588 aa21.16■□□□□ 0.98
BCCIP-202ENST00000299130 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
BCCIP-202ENST00000299130 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
BCCIP-202ENST00000299130 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
BCCIP-202ENST00000299130 TNIKQ9UKE5 1360 aa21.11■□□□□ 0.97
BCCIP-202ENST00000299130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
BCCIP-202ENST00000299130 EEA1Q15075 1411 aa21.07■□□□□ 0.96
BCCIP-202ENST00000299130 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
BCCIP-202ENST00000299130 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
BCCIP-202ENST00000299130 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
BCCIP-202ENST00000299130 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
BCCIP-202ENST00000299130 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
BCCIP-202ENST00000299130 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
BCCIP-202ENST00000299130 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
BCCIP-202ENST00000299130 KIF21BO75037 1637 aa20.84■□□□□ 0.93
BCCIP-202ENST00000299130 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
BCCIP-202ENST00000299130 CLIP1P30622 1438 aa20.76■□□□□ 0.91
BCCIP-202ENST00000299130 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
BCCIP-202ENST00000299130 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
BCCIP-202ENST00000299130 VPS8Q8N3P4 1428 aa20.66■□□□□ 0.9
BCCIP-202ENST00000299130 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
BCCIP-202ENST00000299130 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
BCCIP-202ENST00000299130 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
BCCIP-202ENST00000299130 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
BCCIP-202ENST00000299130 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
BCCIP-202ENST00000299130 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
BCCIP-202ENST00000299130 CUX1P39880 1505 aa20.56■□□□□ 0.88
BCCIP-202ENST00000299130 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
BCCIP-202ENST00000299130 APLP2Q06481 763 aa20.52■□□□□ 0.87
BCCIP-202ENST00000299130 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
BCCIP-202ENST00000299130 CFTRP13569 1480 aa20.47■□□□□ 0.87
BCCIP-202ENST00000299130 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
BCCIP-202ENST00000299130 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
BCCIP-202ENST00000299130 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
BCCIP-202ENST00000299130 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
BCCIP-202ENST00000299130 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
BCCIP-202ENST00000299130 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
BCCIP-202ENST00000299130 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
BCCIP-202ENST00000299130 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.84
BCCIP-202ENST00000299130 CUX2O14529 1486 aa20.25■□□□□ 0.83
BCCIP-202ENST00000299130 IGF1RP08069 1367 aa20.23■□□□□ 0.83
BCCIP-202ENST00000299130 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
BCCIP-202ENST00000299130 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
BCCIP-202ENST00000299130 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
BCCIP-202ENST00000299130 GTF3C3Q9Y5Q9 886 aa20.2■□□□□ 0.82
BCCIP-202ENST00000299130 MIER1Q8N108 512 aa20.2■□□□□ 0.82
BCCIP-202ENST00000299130 RRBP1Q9P2E9 1410 aaKnown RBP20.18■□□□□ 0.82
BCCIP-202ENST00000299130 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
BCCIP-202ENST00000299130 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.82
BCCIP-202ENST00000299130 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
BCCIP-202ENST00000299130 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
BCCIP-202ENST00000299130 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
BCCIP-202ENST00000299130 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.81
BCCIP-202ENST00000299130 ITGAEP38570 1179 aa20.08■□□□□ 0.81
BCCIP-202ENST00000299130 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
BCCIP-202ENST00000299130 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
BCCIP-202ENST00000299130 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
BCCIP-202ENST00000299130 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
BCCIP-202ENST00000299130 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
BCCIP-202ENST00000299130 NESP48681 1621 aa19.98■□□□□ 0.79
BCCIP-202ENST00000299130 MAP3K1Q13233 1512 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms