RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 DCAF8L2P0C7V8 631 aa12.38□□□□□ -0.43
GAPVD1-202ENST00000297933 NISCHQ9Y2I1 1504 aa11.41□□□□□ -0.58
GAPVD1-202ENST00000297933 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-202ENST00000297933 SHROOM4Q9ULL8 1493 aa11.24□□□□□ -0.61
GAPVD1-202ENST00000297933 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
GAPVD1-202ENST00000297933 FAM9AQ8IZU1 332 aaPredicted RBP11.14□□□□□ -0.63
GAPVD1-202ENST00000297933 APLP2Q06481 763 aa11.04□□□□□ -0.64
GAPVD1-202ENST00000297933 RANGAP1P46060 587 aaPredicted RBP10.77□□□□□ -0.69
GAPVD1-202ENST00000297933 ATP1B4Q9UN42 357 aaPredicted RBP10.77□□□□□ -0.69
GAPVD1-202ENST00000297933 TTBK1Q5TCY1 1321 aaPredicted RBP10.73□□□□□ -0.69
GAPVD1-202ENST00000297933 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-202ENST00000297933 TRIM41Q8WV44 630 aa10.59□□□□□ -0.71
GAPVD1-202ENST00000297933 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
GAPVD1-202ENST00000297933 MYT1LQ9UL68 1186 aa10.53□□□□□ -0.72
GAPVD1-202ENST00000297933 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
GAPVD1-202ENST00000297933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
GAPVD1-202ENST00000297933 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
GAPVD1-202ENST00000297933 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
GAPVD1-202ENST00000297933 CHIC1Q5VXU3 224 aa10.29□□□□□ -0.76
GAPVD1-202ENST00000297933 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
GAPVD1-202ENST00000297933 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-202ENST00000297933 ITGAEP38570 1179 aa10.21□□□□□ -0.77
GAPVD1-202ENST00000297933 ABCC9O60706 1549 aa10.21□□□□□ -0.77
GAPVD1-202ENST00000297933 CENPBP07199 599 aaPredicted RBP10.2□□□□□ -0.78
GAPVD1-202ENST00000297933 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
GAPVD1-202ENST00000297933 PABPN1Q86U42 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
GAPVD1-202ENST00000297933 PPARGC1BQ86YN6 1023 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-202ENST00000297933 NEFLP07196 543 aa10.17□□□□□ -0.78
GAPVD1-202ENST00000297933 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
GAPVD1-202ENST00000297933 FBLN2P98095 1184 aa10.1□□□□□ -0.79
GAPVD1-202ENST00000297933 YTHDC1Q96MU7 727 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-202ENST00000297933 CNGB1Q14028 1251 aaPredicted RBP10.04□□□□□ -0.8
GAPVD1-202ENST00000297933 FAM50AQ14320 339 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-202ENST00000297933 TRIM52Q96A61 297 aa9.97□□□□□ -0.81
GAPVD1-202ENST00000297933 DAXXQ9UER7 740 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-202ENST00000297933 BCANQ96GW7 911 aa9.95□□□□□ -0.82
GAPVD1-202ENST00000297933 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-202ENST00000297933 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
GAPVD1-202ENST00000297933 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-202ENST00000297933 SLC24A1O60721 1099 aa9.83□□□□□ -0.84
GAPVD1-202ENST00000297933 ZNF326Q5BKZ1 582 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-202ENST00000297933 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
GAPVD1-202ENST00000297933 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
GAPVD1-202ENST00000297933 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
GAPVD1-202ENST00000297933 NEUROD1Q13562 356 aa9.8□□□□□ -0.84
GAPVD1-202ENST00000297933 CLSPNQ9HAW4 1339 aa9.8□□□□□ -0.84
GAPVD1-202ENST00000297933 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
GAPVD1-202ENST00000297933 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-202ENST00000297933 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
GAPVD1-202ENST00000297933 CDK11AQ9UQ88 783 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-202ENST00000297933 ZBTB47Q9UFB7 747 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-202ENST00000297933 NEFMP07197 916 aa9.75□□□□□ -0.85
GAPVD1-202ENST00000297933 ZNF316A6NFI3 1004 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-202ENST00000297933 HRCP23327 699 aa9.7□□□□□ -0.86
GAPVD1-202ENST00000297933 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-202ENST00000297933 SCRIBQ14160 1630 aa9.68□□□□□ -0.86
GAPVD1-202ENST00000297933 CANXP27824 592 aaKnown RBP9.65□□□□□ -0.87
GAPVD1-202ENST00000297933 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
GAPVD1-202ENST00000297933 ANP32CO43423 234 aa9.62□□□□□ -0.87
GAPVD1-202ENST00000297933 CHMP7Q8WUX9 453 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-202ENST00000297933 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
GAPVD1-202ENST00000297933 SCAF1Q9H7N4 1312 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-202ENST00000297933 MYT1Q01538 1121 aa9.57□□□□□ -0.88
GAPVD1-202ENST00000297933 DIEXFQ68CQ4 756 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-202ENST00000297933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.884e-9■□□□□ 10.4
GAPVD1-202ENST00000297933 RTL5Q5HYW3 569 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-202ENST00000297933 A0A0G2JS52 829 aa9.52□□□□□ -0.89
GAPVD1-202ENST00000297933 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-202ENST00000297933 TSPY4P0CV99 314 aa9.49□□□□□ -0.89
GAPVD1-202ENST00000297933 TSPY10P0CW01 314 aa9.49□□□□□ -0.89
GAPVD1-202ENST00000297933 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
GAPVD1-202ENST00000297933 RB1CC1Q8TDY2 1594 aa9.48□□□□□ -0.89
GAPVD1-202ENST00000297933 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
GAPVD1-202ENST00000297933 PPP1R15AO75807 674 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-202ENST00000297933 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.89
GAPVD1-202ENST00000297933 CHIC2Q9UKJ5 165 aa9.46□□□□□ -0.89
GAPVD1-202ENST00000297933 ERCC6Q03468 1493 aa9.45□□□□□ -0.9
GAPVD1-202ENST00000297933 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
GAPVD1-202ENST00000297933 TONSLQ96HA7 1378 aa9.44□□□□□ -0.9
GAPVD1-202ENST00000297933 HAP1P54257 671 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-202ENST00000297933 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-202ENST00000297933 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-202ENST00000297933 SENP3Q9H4L4 574 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-202ENST00000297933 MTUS2Q5JR59 1369 aa9.41□□□□□ -0.9
GAPVD1-202ENST00000297933 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.91
GAPVD1-202ENST00000297933 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
GAPVD1-202ENST00000297933 CCDC180Q9P1Z9 1646 aa9.39□□□□□ -0.91
GAPVD1-202ENST00000297933 ZCCHC6Q5VYS8 1495 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-202ENST00000297933 WDR43Q15061 677 aaKnown RBP eCLIP9.34□□□□□ -0.91
GAPVD1-202ENST00000297933 BAZ1BQ9UIG0 1483 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-202ENST00000297933 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-202ENST00000297933 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-202ENST00000297933 RSF1Q96T23 1441 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-202ENST00000297933 FAM9BQ8IZU0 186 aa9.29□□□□□ -0.92
GAPVD1-202ENST00000297933 TMC1Q8TDI8 760 aa9.29□□□□□ -0.92
GAPVD1-202ENST00000297933 ARXQ96QS3 562 aa9.29□□□□□ -0.92
GAPVD1-202ENST00000297933 RRP7BPQ9NSQ0 103 aa9.29□□□□□ -0.92
GAPVD1-202ENST00000297933 LMOD2Q6P5Q4 547 aa9.28□□□□□ -0.92
GAPVD1-202ENST00000297933 NACADO15069 1562 aa9.28□□□□□ -0.92
GAPVD1-202ENST00000297933 UPF2Q9HAU5 1272 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms