RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
TGFA-201ENST00000295400 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
TGFA-201ENST00000295400 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
TGFA-201ENST00000295400 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
TGFA-201ENST00000295400 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
TGFA-201ENST00000295400 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
TGFA-201ENST00000295400 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
TGFA-201ENST00000295400 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
TGFA-201ENST00000295400 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
TGFA-201ENST00000295400 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
TGFA-201ENST00000295400 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
TGFA-201ENST00000295400 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
TGFA-201ENST00000295400 HRCP23327 699 aa18.16■□□□□ 0.5
TGFA-201ENST00000295400 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
TGFA-201ENST00000295400 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
TGFA-201ENST00000295400 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
TGFA-201ENST00000295400 APLP2Q06481 763 aa17.91■□□□□ 0.46
TGFA-201ENST00000295400 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
TGFA-201ENST00000295400 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
TGFA-201ENST00000295400 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
TGFA-201ENST00000295400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
TGFA-201ENST00000295400 CENPBP07199 599 aaPredicted RBP17.57■□□□□ 0.4
TGFA-201ENST00000295400 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
TGFA-201ENST00000295400 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
TGFA-201ENST00000295400 ABCC9O60706 1549 aa17.46■□□□□ 0.39
TGFA-201ENST00000295400 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.38
TGFA-201ENST00000295400 ITGAEP38570 1179 aa17.4■□□□□ 0.38
TGFA-201ENST00000295400 ZCCHC6Q5VYS8 1495 aaKnown RBP17.4■□□□□ 0.38
TGFA-201ENST00000295400 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
TGFA-201ENST00000295400 PELP1Q8IZL8 1130 aaKnown RBP17.3■□□□□ 0.36
TGFA-201ENST00000295400 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.35
TGFA-201ENST00000295400 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
TGFA-201ENST00000295400 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
TGFA-201ENST00000295400 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
TGFA-201ENST00000295400 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
TGFA-201ENST00000295400 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
TGFA-201ENST00000295400 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
TGFA-201ENST00000295400 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.3
TGFA-201ENST00000295400 NEFLP07196 543 aa16.89■□□□□ 0.29
TGFA-201ENST00000295400 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
TGFA-201ENST00000295400 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
TGFA-201ENST00000295400 NEUROD1Q13562 356 aa16.87■□□□□ 0.29
TGFA-201ENST00000295400 FAM50AQ14320 339 aaKnown RBP16.87■□□□□ 0.29
TGFA-201ENST00000295400 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
TGFA-201ENST00000295400 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
TGFA-201ENST00000295400 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
TGFA-201ENST00000295400 BCANQ96GW7 911 aa16.79■□□□□ 0.28
TGFA-201ENST00000295400 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
TGFA-201ENST00000295400 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
TGFA-201ENST00000295400 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
TGFA-201ENST00000295400 MIER1Q8N108 512 aa16.62■□□□□ 0.25
TGFA-201ENST00000295400 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
TGFA-201ENST00000295400 CEP162Q5TB80 1403 aa16.52■□□□□ 0.24
TGFA-201ENST00000295400 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
TGFA-201ENST00000295400 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
TGFA-201ENST00000295400 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
TGFA-201ENST00000295400 MYT1Q01538 1121 aa16.45■□□□□ 0.22
TGFA-201ENST00000295400 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
TGFA-201ENST00000295400 SOGA1O94964 1423 aa16.43■□□□□ 0.22
TGFA-201ENST00000295400 CLIP1P30622 1438 aa16.43■□□□□ 0.22
TGFA-201ENST00000295400 ANP32CO43423 234 aa16.42■□□□□ 0.22
TGFA-201ENST00000295400 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
TGFA-201ENST00000295400 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
TGFA-201ENST00000295400 FKBP8Q14318 412 aa16.34■□□□□ 0.21
TGFA-201ENST00000295400 FBLN2P98095 1184 aa16.33■□□□□ 0.21
TGFA-201ENST00000295400 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
TGFA-201ENST00000295400 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
TGFA-201ENST00000295400 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
TGFA-201ENST00000295400 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
TGFA-201ENST00000295400 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
TGFA-201ENST00000295400 NACADO15069 1562 aa16.28■□□□□ 0.2
TGFA-201ENST00000295400 GOLGA3Q08378 1498 aa16.27■□□□□ 0.2
TGFA-201ENST00000295400 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
TGFA-201ENST00000295400 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
TGFA-201ENST00000295400 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
TGFA-201ENST00000295400 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
TGFA-201ENST00000295400 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
TGFA-201ENST00000295400 TONSLQ96HA7 1378 aa16.18■□□□□ 0.18
TGFA-201ENST00000295400 WIZO95785 1651 aa16.17■□□□□ 0.18
TGFA-201ENST00000295400 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
TGFA-201ENST00000295400 EEA1Q15075 1411 aa16.16■□□□□ 0.18
TGFA-201ENST00000295400 FAM9BQ8IZU0 186 aa16.16■□□□□ 0.18
TGFA-201ENST00000295400 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
TGFA-201ENST00000295400 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
TGFA-201ENST00000295400 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
TGFA-201ENST00000295400 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
TGFA-201ENST00000295400 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
TGFA-201ENST00000295400 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
TGFA-201ENST00000295400 SALL2Q9Y467 1007 aaPredicted RBP16.09■□□□□ 0.17
TGFA-201ENST00000295400 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
TGFA-201ENST00000295400 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
TGFA-201ENST00000295400 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
TGFA-201ENST00000295400 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
TGFA-201ENST00000295400 SUPT16HQ9Y5B9 1047 aaKnown RBP15.97■□□□□ 0.15
TGFA-201ENST00000295400 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
TGFA-201ENST00000295400 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
TGFA-201ENST00000295400 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
TGFA-201ENST00000295400 MRS2Q9HD23 443 aa15.96■□□□□ 0.15
TGFA-201ENST00000295400 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
TGFA-201ENST00000295400 NPM2Q86SE8 214 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms