RNA–Protein interactions for RNA: ENST00000290974.6

ZFYVE28-201, Transcript of zinc finger FYVE-type containing 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZFYVE28, Length 4,131 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-201ENST00000290974 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
ZFYVE28-201ENST00000290974 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
ZFYVE28-201ENST00000290974 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
ZFYVE28-201ENST00000290974 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
ZFYVE28-201ENST00000290974 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
ZFYVE28-201ENST00000290974 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
ZFYVE28-201ENST00000290974 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
ZFYVE28-201ENST00000290974 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
ZFYVE28-201ENST00000290974 EHMT2Q96KQ7 1210 aa24.22■■□□□ 1.47
ZFYVE28-201ENST00000290974 HRCP23327 699 aa24.07■■□□□ 1.44
ZFYVE28-201ENST00000290974 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
ZFYVE28-201ENST00000290974 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
ZFYVE28-201ENST00000290974 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
ZFYVE28-201ENST00000290974 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
ZFYVE28-201ENST00000290974 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
ZFYVE28-201ENST00000290974 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
ZFYVE28-201ENST00000290974 ABCC9O60706 1549 aa23.56■■□□□ 1.36
ZFYVE28-201ENST00000290974 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
ZFYVE28-201ENST00000290974 ZEB1P37275 1124 aaPredicted RBP23.39■■□□□ 1.33
ZFYVE28-201ENST00000290974 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
ZFYVE28-201ENST00000290974 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
ZFYVE28-201ENST00000290974 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
ZFYVE28-201ENST00000290974 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
ZFYVE28-201ENST00000290974 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
ZFYVE28-201ENST00000290974 NACADO15069 1562 aa22.86■■□□□ 1.25
ZFYVE28-201ENST00000290974 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
ZFYVE28-201ENST00000290974 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
ZFYVE28-201ENST00000290974 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
ZFYVE28-201ENST00000290974 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
ZFYVE28-201ENST00000290974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
ZFYVE28-201ENST00000290974 APLP2Q06481 763 aa22.56■■□□□ 1.2
ZFYVE28-201ENST00000290974 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
ZFYVE28-201ENST00000290974 WIZO95785 1651 aa22.5■■□□□ 1.19
ZFYVE28-201ENST00000290974 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
ZFYVE28-201ENST00000290974 YTHDC1Q96MU7 727 aaKnown RBP22.46■■□□□ 1.19
ZFYVE28-201ENST00000290974 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
ZFYVE28-201ENST00000290974 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
ZFYVE28-201ENST00000290974 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
ZFYVE28-201ENST00000290974 DIEXFQ68CQ4 756 aaKnown RBP22.35■■□□□ 1.17
ZFYVE28-201ENST00000290974 CEP162Q5TB80 1403 aa22.27■■□□□ 1.16
ZFYVE28-201ENST00000290974 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
ZFYVE28-201ENST00000290974 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
ZFYVE28-201ENST00000290974 EEA1Q15075 1411 aa22.23■■□□□ 1.15
ZFYVE28-201ENST00000290974 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
ZFYVE28-201ENST00000290974 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
ZFYVE28-201ENST00000290974 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
ZFYVE28-201ENST00000290974 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
ZFYVE28-201ENST00000290974 SOGA1O94964 1423 aa22.18■■□□□ 1.14
ZFYVE28-201ENST00000290974 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
ZFYVE28-201ENST00000290974 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
ZFYVE28-201ENST00000290974 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
ZFYVE28-201ENST00000290974 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
ZFYVE28-201ENST00000290974 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
ZFYVE28-201ENST00000290974 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
ZFYVE28-201ENST00000290974 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
ZFYVE28-201ENST00000290974 NEUROD1Q13562 356 aa22■■□□□ 1.11
ZFYVE28-201ENST00000290974 GTF3C3Q9Y5Q9 886 aa22■■□□□ 1.11
ZFYVE28-201ENST00000290974 CLIP1P30622 1438 aa21.96■■□□□ 1.11
ZFYVE28-201ENST00000290974 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
ZFYVE28-201ENST00000290974 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
ZFYVE28-201ENST00000290974 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
ZFYVE28-201ENST00000290974 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
ZFYVE28-201ENST00000290974 ITGAEP38570 1179 aa21.81■■□□□ 1.08
ZFYVE28-201ENST00000290974 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
ZFYVE28-201ENST00000290974 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
ZFYVE28-201ENST00000290974 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
ZFYVE28-201ENST00000290974 MIER1Q8N108 512 aa21.67■■□□□ 1.06
ZFYVE28-201ENST00000290974 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
ZFYVE28-201ENST00000290974 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
ZFYVE28-201ENST00000290974 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
ZFYVE28-201ENST00000290974 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
ZFYVE28-201ENST00000290974 KIF21BO75037 1637 aa21.53■■□□□ 1.04
ZFYVE28-201ENST00000290974 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
ZFYVE28-201ENST00000290974 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
ZFYVE28-201ENST00000290974 NEFLP07196 543 aa21.5■■□□□ 1.03
ZFYVE28-201ENST00000290974 CLSPNQ9HAW4 1339 aa21.48■■□□□ 1.03
ZFYVE28-201ENST00000290974 MYT1Q01538 1121 aa21.48■■□□□ 1.03
ZFYVE28-201ENST00000290974 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
ZFYVE28-201ENST00000290974 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
ZFYVE28-201ENST00000290974 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
ZFYVE28-201ENST00000290974 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
ZFYVE28-201ENST00000290974 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
ZFYVE28-201ENST00000290974 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
ZFYVE28-201ENST00000290974 TOP2BQ02880 1626 aa21.29■■□□□ 1
ZFYVE28-201ENST00000290974 DHX57Q6P158 1386 aaKnown RBP21.28■■□□□ 1
ZFYVE28-201ENST00000290974 BCANQ96GW7 911 aa21.27■■□□□ 1
ZFYVE28-201ENST00000290974 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
ZFYVE28-201ENST00000290974 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
ZFYVE28-201ENST00000290974 CUX2O14529 1486 aa21.22■□□□□ 0.99
ZFYVE28-201ENST00000290974 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
ZFYVE28-201ENST00000290974 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
ZFYVE28-201ENST00000290974 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
ZFYVE28-201ENST00000290974 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
ZFYVE28-201ENST00000290974 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
ZFYVE28-201ENST00000290974 CUX1P39880 1505 aa21.09■□□□□ 0.97
ZFYVE28-201ENST00000290974 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
ZFYVE28-201ENST00000290974 RRBP1Q9P2E9 1410 aaKnown RBP21.08■□□□□ 0.96
ZFYVE28-201ENST00000290974 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
ZFYVE28-201ENST00000290974 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
ZFYVE28-201ENST00000290974 ANP32CO43423 234 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms