RNA–Protein interactions for RNA: ENST00000290277.10

ARAF-201, Transcript of A-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ARAF, Length 2,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAF-201ENST00000290277 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
ARAF-201ENST00000290277 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
ARAF-201ENST00000290277 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
ARAF-201ENST00000290277 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
ARAF-201ENST00000290277 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
ARAF-201ENST00000290277 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
ARAF-201ENST00000290277 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
ARAF-201ENST00000290277 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
ARAF-201ENST00000290277 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
ARAF-201ENST00000290277 ABCC9O60706 1549 aa23.15■■□□□ 1.3
ARAF-201ENST00000290277 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
ARAF-201ENST00000290277 NACADO15069 1562 aa22.9■■□□□ 1.26
ARAF-201ENST00000290277 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
ARAF-201ENST00000290277 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
ARAF-201ENST00000290277 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
ARAF-201ENST00000290277 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
ARAF-201ENST00000290277 HRCP23327 699 aa22.54■■□□□ 1.2
ARAF-201ENST00000290277 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
ARAF-201ENST00000290277 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
ARAF-201ENST00000290277 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
ARAF-201ENST00000290277 WIZO95785 1651 aa22.37■■□□□ 1.17
ARAF-201ENST00000290277 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
ARAF-201ENST00000290277 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
ARAF-201ENST00000290277 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
ARAF-201ENST00000290277 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
ARAF-201ENST00000290277 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
ARAF-201ENST00000290277 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
ARAF-201ENST00000290277 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
ARAF-201ENST00000290277 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
ARAF-201ENST00000290277 PPARGC1BQ86YN6 1023 aaKnown RBP21.98■■□□□ 1.11
ARAF-201ENST00000290277 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
ARAF-201ENST00000290277 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
ARAF-201ENST00000290277 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
ARAF-201ENST00000290277 BICRAQ9NZM4 1560 aa21.83■■□□□ 1.09
ARAF-201ENST00000290277 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
ARAF-201ENST00000290277 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
ARAF-201ENST00000290277 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
ARAF-201ENST00000290277 EEA1Q15075 1411 aa21.62■■□□□ 1.05
ARAF-201ENST00000290277 SOGA1O94964 1423 aa21.6■■□□□ 1.05
ARAF-201ENST00000290277 WRNQ14191 1432 aaPredicted RBP eCLIP21.54■■□□□ 1.04
ARAF-201ENST00000290277 ATAD2BQ9ULI0 1458 aa21.54■■□□□ 1.04
ARAF-201ENST00000290277 CEP162Q5TB80 1403 aa21.53■■□□□ 1.04
ARAF-201ENST00000290277 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
ARAF-201ENST00000290277 CSRNP3Q8WYN3 585 aa21.51■■□□□ 1.03
ARAF-201ENST00000290277 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
ARAF-201ENST00000290277 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.03
ARAF-201ENST00000290277 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
ARAF-201ENST00000290277 GOLGA3Q08378 1498 aa21.43■■□□□ 1.02
ARAF-201ENST00000290277 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
ARAF-201ENST00000290277 CEP164Q9UPV0 1460 aa21.33■■□□□ 1
ARAF-201ENST00000290277 KIF21BO75037 1637 aa21.3■■□□□ 1
ARAF-201ENST00000290277 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
ARAF-201ENST00000290277 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
ARAF-201ENST00000290277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.28■■□□□ 1
ARAF-201ENST00000290277 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
ARAF-201ENST00000290277 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
ARAF-201ENST00000290277 CLIP1P30622 1438 aa21.16■□□□□ 0.98
ARAF-201ENST00000290277 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
ARAF-201ENST00000290277 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
ARAF-201ENST00000290277 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
ARAF-201ENST00000290277 VPS8Q8N3P4 1428 aa21.07■□□□□ 0.96
ARAF-201ENST00000290277 APLP2Q06481 763 aa21.02■□□□□ 0.95
ARAF-201ENST00000290277 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
ARAF-201ENST00000290277 CUX1P39880 1505 aa20.96■□□□□ 0.95
ARAF-201ENST00000290277 CFTRP13569 1480 aa20.96■□□□□ 0.95
ARAF-201ENST00000290277 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
ARAF-201ENST00000290277 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
ARAF-201ENST00000290277 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
ARAF-201ENST00000290277 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
ARAF-201ENST00000290277 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
ARAF-201ENST00000290277 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
ARAF-201ENST00000290277 ARAP1Q96P48 1450 aa20.79■□□□□ 0.92
ARAF-201ENST00000290277 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
ARAF-201ENST00000290277 CUX2O14529 1486 aa20.68■□□□□ 0.9
ARAF-201ENST00000290277 ZNF316A6NFI3 1004 aaPredicted RBP20.68■□□□□ 0.9
ARAF-201ENST00000290277 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
ARAF-201ENST00000290277 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
ARAF-201ENST00000290277 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
ARAF-201ENST00000290277 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
ARAF-201ENST00000290277 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
ARAF-201ENST00000290277 IGF1RP08069 1367 aa20.61■□□□□ 0.89
ARAF-201ENST00000290277 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
ARAF-201ENST00000290277 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
ARAF-201ENST00000290277 ACIN1Q9UKV3 1341 aaKnown RBP20.56■□□□□ 0.88
ARAF-201ENST00000290277 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
ARAF-201ENST00000290277 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
ARAF-201ENST00000290277 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
ARAF-201ENST00000290277 CLSPNQ9HAW4 1339 aa20.53■□□□□ 0.88
ARAF-201ENST00000290277 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
ARAF-201ENST00000290277 CCNB3Q8WWL7 1395 aa20.48■□□□□ 0.87
ARAF-201ENST00000290277 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
ARAF-201ENST00000290277 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
ARAF-201ENST00000290277 TIAM1Q13009 1591 aa20.43■□□□□ 0.86
ARAF-201ENST00000290277 MAP3K1Q13233 1512 aa20.43■□□□□ 0.86
ARAF-201ENST00000290277 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
ARAF-201ENST00000290277 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
ARAF-201ENST00000290277 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
ARAF-201ENST00000290277 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
ARAF-201ENST00000290277 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
ARAF-201ENST00000290277 ITGAEP38570 1179 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms