RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
KCNMA1-202ENST00000286628 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
KCNMA1-202ENST00000286628 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
KCNMA1-202ENST00000286628 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
KCNMA1-202ENST00000286628 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
KCNMA1-202ENST00000286628 APLP2Q06481 763 aa23.31■■□□□ 1.32
KCNMA1-202ENST00000286628 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
KCNMA1-202ENST00000286628 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
KCNMA1-202ENST00000286628 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
KCNMA1-202ENST00000286628 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
KCNMA1-202ENST00000286628 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
KCNMA1-202ENST00000286628 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
KCNMA1-202ENST00000286628 ATP1B4Q9UN42 357 aaPredicted RBP22.48■■□□□ 1.19
KCNMA1-202ENST00000286628 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
KCNMA1-202ENST00000286628 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
KCNMA1-202ENST00000286628 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.17
KCNMA1-202ENST00000286628 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
KCNMA1-202ENST00000286628 ERICH6Q7L0X2 663 aa21.96■■□□□ 1.11
KCNMA1-202ENST00000286628 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
KCNMA1-202ENST00000286628 NEFLP07196 543 aa21.85■■□□□ 1.09
KCNMA1-202ENST00000286628 TRIM26Q12899 539 aaPredicted RBP21.81■■□□□ 1.08
KCNMA1-202ENST00000286628 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
KCNMA1-202ENST00000286628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
KCNMA1-202ENST00000286628 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
KCNMA1-202ENST00000286628 ITGAEP38570 1179 aa21.68■■□□□ 1.06
KCNMA1-202ENST00000286628 MYT1LQ9UL68 1186 aa21.66■■□□□ 1.06
KCNMA1-202ENST00000286628 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.06
KCNMA1-202ENST00000286628 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
KCNMA1-202ENST00000286628 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
KCNMA1-202ENST00000286628 HRCP23327 699 aa21.45■■□□□ 1.02
KCNMA1-202ENST00000286628 ABCC9O60706 1549 aa21.32■■□□□ 1
KCNMA1-202ENST00000286628 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
KCNMA1-202ENST00000286628 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
KCNMA1-202ENST00000286628 DAXXQ9UER7 740 aaPredicted RBP21.18■□□□□ 0.98
KCNMA1-202ENST00000286628 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
KCNMA1-202ENST00000286628 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
KCNMA1-202ENST00000286628 MYT1Q01538 1121 aa21.08■□□□□ 0.96
KCNMA1-202ENST00000286628 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
KCNMA1-202ENST00000286628 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
KCNMA1-202ENST00000286628 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
KCNMA1-202ENST00000286628 FBLN2P98095 1184 aa20.9■□□□□ 0.94
KCNMA1-202ENST00000286628 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
KCNMA1-202ENST00000286628 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
KCNMA1-202ENST00000286628 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
KCNMA1-202ENST00000286628 ANP32CO43423 234 aa20.7■□□□□ 0.9
KCNMA1-202ENST00000286628 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
KCNMA1-202ENST00000286628 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
KCNMA1-202ENST00000286628 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
KCNMA1-202ENST00000286628 ARID3CA6NKF2 412 aa20.61■□□□□ 0.89
KCNMA1-202ENST00000286628 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
KCNMA1-202ENST00000286628 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
KCNMA1-202ENST00000286628 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
KCNMA1-202ENST00000286628 BCANQ96GW7 911 aa20.48■□□□□ 0.87
KCNMA1-202ENST00000286628 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
KCNMA1-202ENST00000286628 NEFMP07197 916 aa20.44■□□□□ 0.86
KCNMA1-202ENST00000286628 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
KCNMA1-202ENST00000286628 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
KCNMA1-202ENST00000286628 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
KCNMA1-202ENST00000286628 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
KCNMA1-202ENST00000286628 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
KCNMA1-202ENST00000286628 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
KCNMA1-202ENST00000286628 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
KCNMA1-202ENST00000286628 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
KCNMA1-202ENST00000286628 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
KCNMA1-202ENST00000286628 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
KCNMA1-202ENST00000286628 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.82
KCNMA1-202ENST00000286628 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
KCNMA1-202ENST00000286628 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
KCNMA1-202ENST00000286628 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
KCNMA1-202ENST00000286628 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
KCNMA1-202ENST00000286628 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
KCNMA1-202ENST00000286628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.8
KCNMA1-202ENST00000286628 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
KCNMA1-202ENST00000286628 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
KCNMA1-202ENST00000286628 MTUS2Q5JR59 1369 aa20.04■□□□□ 0.8
KCNMA1-202ENST00000286628 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
KCNMA1-202ENST00000286628 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
KCNMA1-202ENST00000286628 FAM9BQ8IZU0 186 aa20■□□□□ 0.79
KCNMA1-202ENST00000286628 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
KCNMA1-202ENST00000286628 FKBP8Q14318 412 aa19.96■□□□□ 0.79
KCNMA1-202ENST00000286628 TMC1Q8TDI8 760 aa19.96■□□□□ 0.79
KCNMA1-202ENST00000286628 CLIP1P30622 1438 aa19.94■□□□□ 0.78
KCNMA1-202ENST00000286628 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
KCNMA1-202ENST00000286628 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
KCNMA1-202ENST00000286628 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
KCNMA1-202ENST00000286628 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
KCNMA1-202ENST00000286628 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
KCNMA1-202ENST00000286628 UPF2Q9HAU5 1272 aaKnown RBP19.85■□□□□ 0.77
KCNMA1-202ENST00000286628 EEA1Q15075 1411 aa19.84■□□□□ 0.77
KCNMA1-202ENST00000286628 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
KCNMA1-202ENST00000286628 HSP90AA1P07900 732 aaKnown RBP19.83■□□□□ 0.76
KCNMA1-202ENST00000286628 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.83■□□□□ 0.76
KCNMA1-202ENST00000286628 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
KCNMA1-202ENST00000286628 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
KCNMA1-202ENST00000286628 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
KCNMA1-202ENST00000286628 EIF4G2P78344 907 aaKnown RBP eCLIP19.79■□□□□ 0.76
KCNMA1-202ENST00000286628 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
KCNMA1-202ENST00000286628 CCDC136Q96JN2 1154 aa19.78■□□□□ 0.76
KCNMA1-202ENST00000286628 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
KCNMA1-202ENST00000286628 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms