RNA–Protein interactions for RNA: ENST00000272771.9

TMEFF2-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF2, Length 2,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF2-201ENST00000272771 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
TMEFF2-201ENST00000272771 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
TMEFF2-201ENST00000272771 CCDC180Q9P1Z9 1646 aa31.29■■■□□ 2.6
TMEFF2-201ENST00000272771 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
TMEFF2-201ENST00000272771 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
TMEFF2-201ENST00000272771 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
TMEFF2-201ENST00000272771 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
TMEFF2-201ENST00000272771 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
TMEFF2-201ENST00000272771 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
TMEFF2-201ENST00000272771 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
TMEFF2-201ENST00000272771 ABCC9O60706 1549 aa29.47■■■□□ 2.31
TMEFF2-201ENST00000272771 RSF1Q96T23 1441 aaPredicted RBP29.14■■■□□ 2.26
TMEFF2-201ENST00000272771 NACADO15069 1562 aa29.04■■■□□ 2.24
TMEFF2-201ENST00000272771 LOC105371045A0A1W2PR82 267 aa29■■■□□ 2.23
TMEFF2-201ENST00000272771 CECR2Q9BXF3 1484 aa28.89■■■□□ 2.22
TMEFF2-201ENST00000272771 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
TMEFF2-201ENST00000272771 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
TMEFF2-201ENST00000272771 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
TMEFF2-201ENST00000272771 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
TMEFF2-201ENST00000272771 WIZO95785 1651 aa28.56■■■□□ 2.16
TMEFF2-201ENST00000272771 FAM9AQ8IZU1 332 aaPredicted RBP28.54■■■□□ 2.16
TMEFF2-201ENST00000272771 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
TMEFF2-201ENST00000272771 HRCP23327 699 aa28.39■■■□□ 2.14
TMEFF2-201ENST00000272771 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
TMEFF2-201ENST00000272771 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.11
TMEFF2-201ENST00000272771 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
TMEFF2-201ENST00000272771 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
TMEFF2-201ENST00000272771 TRIM26Q12899 539 aaPredicted RBP28.05■■■□□ 2.08
TMEFF2-201ENST00000272771 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
TMEFF2-201ENST00000272771 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
TMEFF2-201ENST00000272771 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
TMEFF2-201ENST00000272771 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
TMEFF2-201ENST00000272771 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
TMEFF2-201ENST00000272771 ABCC8Q09428 1581 aa27.89■■■□□ 2.05
TMEFF2-201ENST00000272771 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
TMEFF2-201ENST00000272771 SOGA1O94964 1423 aa27.6■■■□□ 2.01
TMEFF2-201ENST00000272771 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
TMEFF2-201ENST00000272771 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
TMEFF2-201ENST00000272771 ATAD2BQ9ULI0 1458 aa27.48■■□□□ 1.99
TMEFF2-201ENST00000272771 TTBK1Q5TCY1 1321 aaPredicted RBP27.4■■□□□ 1.98
TMEFF2-201ENST00000272771 CSRNP3Q8WYN3 585 aa27.39■■□□□ 1.98
TMEFF2-201ENST00000272771 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.97
TMEFF2-201ENST00000272771 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
TMEFF2-201ENST00000272771 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
TMEFF2-201ENST00000272771 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
TMEFF2-201ENST00000272771 SYNJ1O43426 1573 aa27.25■■□□□ 1.95
TMEFF2-201ENST00000272771 ZEB1P37275 1124 aaPredicted RBP27.21■■□□□ 1.95
TMEFF2-201ENST00000272771 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
TMEFF2-201ENST00000272771 EEA1Q15075 1411 aa27.19■■□□□ 1.94
TMEFF2-201ENST00000272771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.93
TMEFF2-201ENST00000272771 GOLGA3Q08378 1498 aa27.08■■□□□ 1.93
TMEFF2-201ENST00000272771 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
TMEFF2-201ENST00000272771 CCER1Q8TC90 406 aaPredicted RBP26.98■■□□□ 1.91
TMEFF2-201ENST00000272771 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
TMEFF2-201ENST00000272771 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
TMEFF2-201ENST00000272771 RAPGEF2Q9Y4G8 1499 aa26.9■■□□□ 1.9
TMEFF2-201ENST00000272771 KIF21BO75037 1637 aa26.86■■□□□ 1.89
TMEFF2-201ENST00000272771 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
TMEFF2-201ENST00000272771 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
TMEFF2-201ENST00000272771 CLIP1P30622 1438 aa26.83■■□□□ 1.89
TMEFF2-201ENST00000272771 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
TMEFF2-201ENST00000272771 CUX1P39880 1505 aa26.72■■□□□ 1.87
TMEFF2-201ENST00000272771 CFTRP13569 1480 aa26.67■■□□□ 1.86
TMEFF2-201ENST00000272771 HNRNPUL2Q1KMD3 747 aaKnown RBP26.66■■□□□ 1.86
TMEFF2-201ENST00000272771 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.85
TMEFF2-201ENST00000272771 APLP2Q06481 763 aa26.6■■□□□ 1.85
TMEFF2-201ENST00000272771 PRXQ9BXM0 1461 aa26.57■■□□□ 1.84
TMEFF2-201ENST00000272771 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
TMEFF2-201ENST00000272771 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
TMEFF2-201ENST00000272771 ERICH3Q5RHP9 1530 aa26.45■■□□□ 1.83
TMEFF2-201ENST00000272771 CC2D2AQ9P2K1 1620 aa26.44■■□□□ 1.82
TMEFF2-201ENST00000272771 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
TMEFF2-201ENST00000272771 KANK4Q5T7N3 995 aaPredicted RBP26.39■■□□□ 1.81
TMEFF2-201ENST00000272771 CUX2O14529 1486 aa26.38■■□□□ 1.81
TMEFF2-201ENST00000272771 IGF1RP08069 1367 aa26.32■■□□□ 1.8
TMEFF2-201ENST00000272771 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
TMEFF2-201ENST00000272771 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
TMEFF2-201ENST00000272771 DIEXFQ68CQ4 756 aaKnown RBP26.28■■□□□ 1.8
TMEFF2-201ENST00000272771 ARHGAP35Q9NRY4 1499 aa26.24■■□□□ 1.79
TMEFF2-201ENST00000272771 NESP48681 1621 aa26.21■■□□□ 1.79
TMEFF2-201ENST00000272771 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
TMEFF2-201ENST00000272771 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
TMEFF2-201ENST00000272771 RAD54L2Q9Y4B4 1467 aa26.14■■□□□ 1.77
TMEFF2-201ENST00000272771 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
TMEFF2-201ENST00000272771 ZNF316A6NFI3 1004 aaPredicted RBP26.12■■□□□ 1.77
TMEFF2-201ENST00000272771 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
TMEFF2-201ENST00000272771 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
TMEFF2-201ENST00000272771 ITGAEP38570 1179 aa26.08■■□□□ 1.77
TMEFF2-201ENST00000272771 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
TMEFF2-201ENST00000272771 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
TMEFF2-201ENST00000272771 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
TMEFF2-201ENST00000272771 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
TMEFF2-201ENST00000272771 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
TMEFF2-201ENST00000272771 DHX57Q6P158 1386 aaKnown RBP25.95■■□□□ 1.74
TMEFF2-201ENST00000272771 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
TMEFF2-201ENST00000272771 CCNB3Q8WWL7 1395 aa25.93■■□□□ 1.74
TMEFF2-201ENST00000272771 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
TMEFF2-201ENST00000272771 URB2Q14146 1524 aaKnown RBP25.86■■□□□ 1.73
TMEFF2-201ENST00000272771 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
TMEFF2-201ENST00000272771 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 491.9 ms