RNA–Protein interactions for RNA: ENST00000272746.9

WIPF1-201, Transcript of WAS/WASL interacting protein family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene WIPF1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1-201ENST00000272746 NISCHQ9Y2I1 1504 aa35.18■■■■□ 3.22
WIPF1-201ENST00000272746 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
WIPF1-201ENST00000272746 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
WIPF1-201ENST00000272746 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
WIPF1-201ENST00000272746 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
WIPF1-201ENST00000272746 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
WIPF1-201ENST00000272746 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
WIPF1-201ENST00000272746 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
WIPF1-201ENST00000272746 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
WIPF1-201ENST00000272746 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
WIPF1-201ENST00000272746 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
WIPF1-201ENST00000272746 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
WIPF1-201ENST00000272746 ABCC9O60706 1549 aa28.08■■■□□ 2.09
WIPF1-201ENST00000272746 HRCP23327 699 aa28■■■□□ 2.07
WIPF1-201ENST00000272746 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
WIPF1-201ENST00000272746 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
WIPF1-201ENST00000272746 FAM9AQ8IZU1 332 aaPredicted RBP27.91■■■□□ 2.06
WIPF1-201ENST00000272746 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
WIPF1-201ENST00000272746 PPARGC1BQ86YN6 1023 aaKnown RBP27.8■■■□□ 2.04
WIPF1-201ENST00000272746 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.03
WIPF1-201ENST00000272746 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
WIPF1-201ENST00000272746 NACADO15069 1562 aa27.5■■□□□ 1.99
WIPF1-201ENST00000272746 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
WIPF1-201ENST00000272746 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
WIPF1-201ENST00000272746 WIZO95785 1651 aa27.34■■□□□ 1.97
WIPF1-201ENST00000272746 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
WIPF1-201ENST00000272746 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
WIPF1-201ENST00000272746 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.9
WIPF1-201ENST00000272746 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
WIPF1-201ENST00000272746 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
WIPF1-201ENST00000272746 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
WIPF1-201ENST00000272746 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
WIPF1-201ENST00000272746 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
WIPF1-201ENST00000272746 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
WIPF1-201ENST00000272746 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
WIPF1-201ENST00000272746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.67■■□□□ 1.86
WIPF1-201ENST00000272746 SOGA1O94964 1423 aa26.65■■□□□ 1.86
WIPF1-201ENST00000272746 SMARCA2P51531 1590 aa26.64■■□□□ 1.86
WIPF1-201ENST00000272746 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
WIPF1-201ENST00000272746 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
WIPF1-201ENST00000272746 CCER1Q8TC90 406 aaPredicted RBP26.5■■□□□ 1.83
WIPF1-201ENST00000272746 CSRNP3Q8WYN3 585 aa26.49■■□□□ 1.83
WIPF1-201ENST00000272746 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
WIPF1-201ENST00000272746 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
WIPF1-201ENST00000272746 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
WIPF1-201ENST00000272746 WRNQ14191 1432 aaPredicted RBP eCLIP26.29■■□□□ 1.8
WIPF1-201ENST00000272746 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
WIPF1-201ENST00000272746 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
WIPF1-201ENST00000272746 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
WIPF1-201ENST00000272746 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
WIPF1-201ENST00000272746 EEA1Q15075 1411 aa26.11■■□□□ 1.77
WIPF1-201ENST00000272746 GOLGA3Q08378 1498 aa26.1■■□□□ 1.77
WIPF1-201ENST00000272746 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
WIPF1-201ENST00000272746 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
WIPF1-201ENST00000272746 CLIP1P30622 1438 aa25.94■■□□□ 1.74
WIPF1-201ENST00000272746 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
WIPF1-201ENST00000272746 SCAF1Q9H7N4 1312 aaKnown RBP25.93■■□□□ 1.74
WIPF1-201ENST00000272746 RAPGEF2Q9Y4G8 1499 aa25.92■■□□□ 1.74
WIPF1-201ENST00000272746 APLP2Q06481 763 aa25.9■■□□□ 1.74
WIPF1-201ENST00000272746 DIEXFQ68CQ4 756 aaKnown RBP25.9■■□□□ 1.74
WIPF1-201ENST00000272746 KIF21BO75037 1637 aa25.74■■□□□ 1.71
WIPF1-201ENST00000272746 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
WIPF1-201ENST00000272746 NEUROD1Q13562 356 aa25.7■■□□□ 1.71
WIPF1-201ENST00000272746 TOP2BQ02880 1626 aa25.64■■□□□ 1.7
WIPF1-201ENST00000272746 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
WIPF1-201ENST00000272746 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
WIPF1-201ENST00000272746 ACIN1Q9UKV3 1341 aaKnown RBP25.59■■□□□ 1.69
WIPF1-201ENST00000272746 YTHDC1Q96MU7 727 aaKnown RBP25.58■■□□□ 1.68
WIPF1-201ENST00000272746 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
WIPF1-201ENST00000272746 CUX1P39880 1505 aa25.55■■□□□ 1.68
WIPF1-201ENST00000272746 ITGAEP38570 1179 aa25.52■■□□□ 1.68
WIPF1-201ENST00000272746 PRXQ9BXM0 1461 aa25.48■■□□□ 1.67
WIPF1-201ENST00000272746 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
WIPF1-201ENST00000272746 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
WIPF1-201ENST00000272746 GTF3C3Q9Y5Q9 886 aa25.45■■□□□ 1.66
WIPF1-201ENST00000272746 ARAP1Q96P48 1450 aa25.43■■□□□ 1.66
WIPF1-201ENST00000272746 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
WIPF1-201ENST00000272746 MIER1Q8N108 512 aa25.42■■□□□ 1.66
WIPF1-201ENST00000272746 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
WIPF1-201ENST00000272746 CFTRP13569 1480 aa25.4■■□□□ 1.66
WIPF1-201ENST00000272746 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
WIPF1-201ENST00000272746 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
WIPF1-201ENST00000272746 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
WIPF1-201ENST00000272746 CUX2O14529 1486 aa25.32■■□□□ 1.64
WIPF1-201ENST00000272746 IGF1RP08069 1367 aa25.26■■□□□ 1.63
WIPF1-201ENST00000272746 ARHGAP35Q9NRY4 1499 aa25.24■■□□□ 1.63
WIPF1-201ENST00000272746 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
WIPF1-201ENST00000272746 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
WIPF1-201ENST00000272746 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
WIPF1-201ENST00000272746 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
WIPF1-201ENST00000272746 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
WIPF1-201ENST00000272746 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
WIPF1-201ENST00000272746 RRBP1Q9P2E9 1410 aaKnown RBP25.05■■□□□ 1.6
WIPF1-201ENST00000272746 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
WIPF1-201ENST00000272746 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
WIPF1-201ENST00000272746 NESP48681 1621 aa25.01■■□□□ 1.59
WIPF1-201ENST00000272746 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
WIPF1-201ENST00000272746 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
WIPF1-201ENST00000272746 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.58
WIPF1-201ENST00000272746 CLSPNQ9HAW4 1339 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms