RNA–Protein interactions for RNA: ENST00000272402.2

CIAO1-201, Transcript of cytosolic iron-sulfur assembly component 1, humanhuman

TSL 2

Gene CIAO1, Length 3,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIAO1-201ENST00000272402 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
CIAO1-201ENST00000272402 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
CIAO1-201ENST00000272402 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
CIAO1-201ENST00000272402 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
CIAO1-201ENST00000272402 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
CIAO1-201ENST00000272402 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.82
CIAO1-201ENST00000272402 ABCC9O60706 1549 aa20.12■□□□□ 0.81
CIAO1-201ENST00000272402 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
CIAO1-201ENST00000272402 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
CIAO1-201ENST00000272402 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
CIAO1-201ENST00000272402 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
CIAO1-201ENST00000272402 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
CIAO1-201ENST00000272402 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
CIAO1-201ENST00000272402 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
CIAO1-201ENST00000272402 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
CIAO1-201ENST00000272402 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
CIAO1-201ENST00000272402 TTBK1Q5TCY1 1321 aaPredicted RBP19.32■□□□□ 0.68
CIAO1-201ENST00000272402 PPARGC1BQ86YN6 1023 aaKnown RBP19.29■□□□□ 0.68
CIAO1-201ENST00000272402 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
CIAO1-201ENST00000272402 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
CIAO1-201ENST00000272402 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
CIAO1-201ENST00000272402 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
CIAO1-201ENST00000272402 NACADO15069 1562 aa18.97■□□□□ 0.63
CIAO1-201ENST00000272402 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
CIAO1-201ENST00000272402 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
CIAO1-201ENST00000272402 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
CIAO1-201ENST00000272402 HRCP23327 699 aa18.83■□□□□ 0.6
CIAO1-201ENST00000272402 WIZO95785 1651 aa18.74■□□□□ 0.59
CIAO1-201ENST00000272402 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
CIAO1-201ENST00000272402 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
CIAO1-201ENST00000272402 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
CIAO1-201ENST00000272402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
CIAO1-201ENST00000272402 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
CIAO1-201ENST00000272402 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
CIAO1-201ENST00000272402 APLP2Q06481 763 aa18.46■□□□□ 0.55
CIAO1-201ENST00000272402 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
CIAO1-201ENST00000272402 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
CIAO1-201ENST00000272402 SOGA1O94964 1423 aa18.37■□□□□ 0.53
CIAO1-201ENST00000272402 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
CIAO1-201ENST00000272402 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
CIAO1-201ENST00000272402 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
CIAO1-201ENST00000272402 ITGAEP38570 1179 aa18.25■□□□□ 0.51
CIAO1-201ENST00000272402 RUSC2Q8N2Y8 1516 aa18.24■□□□□ 0.51
CIAO1-201ENST00000272402 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
CIAO1-201ENST00000272402 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
CIAO1-201ENST00000272402 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
CIAO1-201ENST00000272402 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
CIAO1-201ENST00000272402 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
CIAO1-201ENST00000272402 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
CIAO1-201ENST00000272402 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
CIAO1-201ENST00000272402 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
CIAO1-201ENST00000272402 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
CIAO1-201ENST00000272402 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
CIAO1-201ENST00000272402 CLIP1P30622 1438 aa17.93■□□□□ 0.46
CIAO1-201ENST00000272402 GOLGA3Q08378 1498 aa17.91■□□□□ 0.46
CIAO1-201ENST00000272402 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
CIAO1-201ENST00000272402 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
CIAO1-201ENST00000272402 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
CIAO1-201ENST00000272402 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
CIAO1-201ENST00000272402 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
CIAO1-201ENST00000272402 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
CIAO1-201ENST00000272402 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
CIAO1-201ENST00000272402 EEA1Q15075 1411 aa17.81■□□□□ 0.44
CIAO1-201ENST00000272402 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
CIAO1-201ENST00000272402 FBLN2P98095 1184 aa17.74■□□□□ 0.43
CIAO1-201ENST00000272402 KANK4Q5T7N3 995 aaPredicted RBP17.73■□□□□ 0.43
CIAO1-201ENST00000272402 CUX2O14529 1486 aa17.73■□□□□ 0.43
CIAO1-201ENST00000272402 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
CIAO1-201ENST00000272402 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
CIAO1-201ENST00000272402 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
CIAO1-201ENST00000272402 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
CIAO1-201ENST00000272402 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
CIAO1-201ENST00000272402 NESP48681 1621 aa17.63■□□□□ 0.41
CIAO1-201ENST00000272402 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
CIAO1-201ENST00000272402 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
CIAO1-201ENST00000272402 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
CIAO1-201ENST00000272402 VPS8Q8N3P4 1428 aa17.57■□□□□ 0.4
CIAO1-201ENST00000272402 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
CIAO1-201ENST00000272402 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
CIAO1-201ENST00000272402 CUX1P39880 1505 aa17.55■□□□□ 0.4
CIAO1-201ENST00000272402 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
CIAO1-201ENST00000272402 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.39
CIAO1-201ENST00000272402 CFTRP13569 1480 aa17.52■□□□□ 0.39
CIAO1-201ENST00000272402 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
CIAO1-201ENST00000272402 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
CIAO1-201ENST00000272402 IGF1RP08069 1367 aa17.47■□□□□ 0.39
CIAO1-201ENST00000272402 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
CIAO1-201ENST00000272402 CHIC2Q9UKJ5 165 aa17.45■□□□□ 0.38
CIAO1-201ENST00000272402 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
CIAO1-201ENST00000272402 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
CIAO1-201ENST00000272402 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
CIAO1-201ENST00000272402 KIF21BO75037 1637 aa17.4■□□□□ 0.38
CIAO1-201ENST00000272402 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
CIAO1-201ENST00000272402 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.37
CIAO1-201ENST00000272402 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
CIAO1-201ENST00000272402 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
CIAO1-201ENST00000272402 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
CIAO1-201ENST00000272402 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
CIAO1-201ENST00000272402 PRXQ9BXM0 1461 aa17.33■□□□□ 0.37
CIAO1-201ENST00000272402 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms