RNA–Protein interactions for RNA: ENST00000271002.14

ITGB3BP-201, Transcript of integrin subunit beta 3 binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB3BP, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3BP-201ENST00000271002 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
ITGB3BP-201ENST00000271002 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
ITGB3BP-201ENST00000271002 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
ITGB3BP-201ENST00000271002 PHF23Q9BUL5 403 aaPredicted RBP23.76■■□□□ 1.39
ITGB3BP-201ENST00000271002 FOXD1Q16676 465 aa22.41■■□□□ 1.18
ITGB3BP-201ENST00000271002 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
ITGB3BP-201ENST00000271002 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
ITGB3BP-201ENST00000271002 ADRA2BP18089 450 aa21.01■□□□□ 0.95
ITGB3BP-201ENST00000271002 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
ITGB3BP-201ENST00000271002 MSH5O43196 834 aa20.87■□□□□ 0.93
ITGB3BP-201ENST00000271002 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
ITGB3BP-201ENST00000271002 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
ITGB3BP-201ENST00000271002 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
ITGB3BP-201ENST00000271002 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
ITGB3BP-201ENST00000271002 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
ITGB3BP-201ENST00000271002 CNKSR2Q8WXI2 1034 aa18.48■□□□□ 0.55
ITGB3BP-201ENST00000271002 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
ITGB3BP-201ENST00000271002 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
ITGB3BP-201ENST00000271002 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
ITGB3BP-201ENST00000271002 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
ITGB3BP-201ENST00000271002 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
ITGB3BP-201ENST00000271002 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
ITGB3BP-201ENST00000271002 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
ITGB3BP-201ENST00000271002 KCNA4P22459 653 aa17.7■□□□□ 0.42
ITGB3BP-201ENST00000271002 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
ITGB3BP-201ENST00000271002 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
ITGB3BP-201ENST00000271002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.56■□□□□ 0.4
ITGB3BP-201ENST00000271002 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
ITGB3BP-201ENST00000271002 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
ITGB3BP-201ENST00000271002 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
ITGB3BP-201ENST00000271002 CAPN15O75808 1086 aa16.9■□□□□ 0.3
ITGB3BP-201ENST00000271002 DSG3P32926 999 aa16.77■□□□□ 0.28
ITGB3BP-201ENST00000271002 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
ITGB3BP-201ENST00000271002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
ITGB3BP-201ENST00000271002 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
ITGB3BP-201ENST00000271002 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
ITGB3BP-201ENST00000271002 APLP2Q06481 763 aa16.65■□□□□ 0.26
ITGB3BP-201ENST00000271002 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
ITGB3BP-201ENST00000271002 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
ITGB3BP-201ENST00000271002 ABCB7O75027 752 aa16.54■□□□□ 0.24
ITGB3BP-201ENST00000271002 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
ITGB3BP-201ENST00000271002 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
ITGB3BP-201ENST00000271002 ZBTB22O15209 634 aa16.27■□□□□ 0.2
ITGB3BP-201ENST00000271002 POLA2Q14181 598 aa16.24■□□□□ 0.19
ITGB3BP-201ENST00000271002 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
ITGB3BP-201ENST00000271002 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
ITGB3BP-201ENST00000271002 POTEHQ6S545 545 aa15.89■□□□□ 0.13
ITGB3BP-201ENST00000271002 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
ITGB3BP-201ENST00000271002 ZBTB12Q9Y330 459 aaPredicted RBP15.82■□□□□ 0.12
ITGB3BP-201ENST00000271002 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
ITGB3BP-201ENST00000271002 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
ITGB3BP-201ENST00000271002 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
ITGB3BP-201ENST00000271002 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
ITGB3BP-201ENST00000271002 FBLN2P98095 1184 aa15.52■□□□□ 0.08
ITGB3BP-201ENST00000271002 REM2Q8IYK8 340 aaPredicted RBP15.5■□□□□ 0.07
ITGB3BP-201ENST00000271002 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
ITGB3BP-201ENST00000271002 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
ITGB3BP-201ENST00000271002 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
ITGB3BP-201ENST00000271002 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
ITGB3BP-201ENST00000271002 SPDYE2Q495Y8 402 aa15.37■□□□□ 0.05
ITGB3BP-201ENST00000271002 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
ITGB3BP-201ENST00000271002 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
ITGB3BP-201ENST00000271002 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
ITGB3BP-201ENST00000271002 SSUH2Q9Y2M2 353 aa15.18■□□□□ 0.02
ITGB3BP-201ENST00000271002 FXR2P51116 673 aaKnown RBP eCLIP15.16■□□□□ 0.02
ITGB3BP-201ENST00000271002 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
ITGB3BP-201ENST00000271002 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
ITGB3BP-201ENST00000271002 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
ITGB3BP-201ENST00000271002 HAX1O00165 279 aa14.98□□□□□ -0.01
ITGB3BP-201ENST00000271002 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
ITGB3BP-201ENST00000271002 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
ITGB3BP-201ENST00000271002 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
ITGB3BP-201ENST00000271002 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
ITGB3BP-201ENST00000271002 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
ITGB3BP-201ENST00000271002 EVX2Q03828 476 aa14.83□□□□□ -0.04
ITGB3BP-201ENST00000271002 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
ITGB3BP-201ENST00000271002 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
ITGB3BP-201ENST00000271002 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
ITGB3BP-201ENST00000271002 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
ITGB3BP-201ENST00000271002 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
ITGB3BP-201ENST00000271002 CD44P16070 742 aaKnown RBP14.47□□□□□ -0.09
ITGB3BP-201ENST00000271002 GABBR2O75899 941 aa14.46□□□□□ -0.09
ITGB3BP-201ENST00000271002 PROM2Q8N271 834 aa14.38□□□□□ -0.11
ITGB3BP-201ENST00000271002 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
ITGB3BP-201ENST00000271002 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
ITGB3BP-201ENST00000271002 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
ITGB3BP-201ENST00000271002 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
ITGB3BP-201ENST00000271002 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
ITGB3BP-201ENST00000271002 CLCN6P51797 869 aa14.17□□□□□ -0.14
ITGB3BP-201ENST00000271002 FKBP8Q14318 412 aa14.17□□□□□ -0.14
ITGB3BP-201ENST00000271002 PAK3O75914 559 aaPredicted RBP14.16□□□□□ -0.14
ITGB3BP-201ENST00000271002 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
ITGB3BP-201ENST00000271002 MIER1Q8N108 512 aa14.11□□□□□ -0.15
ITGB3BP-201ENST00000271002 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
ITGB3BP-201ENST00000271002 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
ITGB3BP-201ENST00000271002 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
ITGB3BP-201ENST00000271002 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
ITGB3BP-201ENST00000271002 LHX8Q68G74 356 aa14.03□□□□□ -0.16
ITGB3BP-201ENST00000271002 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
ITGB3BP-201ENST00000271002 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms