RNA–Protein interactions for RNA: ENST00000265381.6

APBA1-201, Transcript of amyloid beta precursor protein binding family A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA1, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA1-201ENST00000265381 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
APBA1-201ENST00000265381 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
APBA1-201ENST00000265381 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
APBA1-201ENST00000265381 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
APBA1-201ENST00000265381 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
APBA1-201ENST00000265381 APLP2Q06481 763 aa22.95■■□□□ 1.26
APBA1-201ENST00000265381 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
APBA1-201ENST00000265381 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
APBA1-201ENST00000265381 ERICH6Q7L0X2 663 aa22.77■■□□□ 1.24
APBA1-201ENST00000265381 FAM9AQ8IZU1 332 aaPredicted RBP22.75■■□□□ 1.23
APBA1-201ENST00000265381 ATP1B4Q9UN42 357 aaPredicted RBP22.58■■□□□ 1.21
APBA1-201ENST00000265381 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
APBA1-201ENST00000265381 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
APBA1-201ENST00000265381 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
APBA1-201ENST00000265381 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
APBA1-201ENST00000265381 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
APBA1-201ENST00000265381 NEFLP07196 543 aa22.14■■□□□ 1.14
APBA1-201ENST00000265381 YTHDC1Q96MU7 727 aaKnown RBP22.04■■□□□ 1.12
APBA1-201ENST00000265381 MYT1LQ9UL68 1186 aa21.98■■□□□ 1.11
APBA1-201ENST00000265381 MYT1Q01538 1121 aa21.98■■□□□ 1.11
APBA1-201ENST00000265381 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
APBA1-201ENST00000265381 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
APBA1-201ENST00000265381 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
APBA1-201ENST00000265381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
APBA1-201ENST00000265381 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
APBA1-201ENST00000265381 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
APBA1-201ENST00000265381 DAXXQ9UER7 740 aaPredicted RBP21.69■■□□□ 1.06
APBA1-201ENST00000265381 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
APBA1-201ENST00000265381 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
APBA1-201ENST00000265381 ITGAEP38570 1179 aa21.53■■□□□ 1.04
APBA1-201ENST00000265381 SLC4A1APQ9BWU0 796 aaKnown RBP21.41■■□□□ 1.02
APBA1-201ENST00000265381 TRIM26Q12899 539 aaPredicted RBP21.29■■□□□ 1
APBA1-201ENST00000265381 HRCP23327 699 aa21.26■□□□□ 0.99
APBA1-201ENST00000265381 RTL5Q5HYW3 569 aaPredicted RBP21.17■□□□□ 0.98
APBA1-201ENST00000265381 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
APBA1-201ENST00000265381 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
APBA1-201ENST00000265381 FBLN2P98095 1184 aa20.87■□□□□ 0.93
APBA1-201ENST00000265381 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
APBA1-201ENST00000265381 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
APBA1-201ENST00000265381 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.92
APBA1-201ENST00000265381 SLC24A1O60721 1099 aa20.83■□□□□ 0.92
APBA1-201ENST00000265381 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
APBA1-201ENST00000265381 BCANQ96GW7 911 aa20.77■□□□□ 0.92
APBA1-201ENST00000265381 BCL11AQ9H165 835 aa20.77■□□□□ 0.91
APBA1-201ENST00000265381 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
APBA1-201ENST00000265381 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
APBA1-201ENST00000265381 ZNF326Q5BKZ1 582 aaKnown RBP20.69■□□□□ 0.9
APBA1-201ENST00000265381 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
APBA1-201ENST00000265381 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
APBA1-201ENST00000265381 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
APBA1-201ENST00000265381 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
APBA1-201ENST00000265381 GTF3C3Q9Y5Q9 886 aa20.55■□□□□ 0.88
APBA1-201ENST00000265381 ABCC9O60706 1549 aa20.5■□□□□ 0.87
APBA1-201ENST00000265381 ANP32CO43423 234 aa20.49■□□□□ 0.87
APBA1-201ENST00000265381 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
APBA1-201ENST00000265381 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
APBA1-201ENST00000265381 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
APBA1-201ENST00000265381 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
APBA1-201ENST00000265381 ANP32AP39687 249 aaKnown RBP20.29■□□□□ 0.84
APBA1-201ENST00000265381 EIF5BO60841 1220 aaKnown RBP20.27■□□□□ 0.83
APBA1-201ENST00000265381 NEFMP07197 916 aa20.26■□□□□ 0.83
APBA1-201ENST00000265381 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
APBA1-201ENST00000265381 CHGAP10645 457 aaKnown RBP20.21■□□□□ 0.83
APBA1-201ENST00000265381 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
APBA1-201ENST00000265381 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
APBA1-201ENST00000265381 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
APBA1-201ENST00000265381 A0A0G2JS52 829 aa20.11■□□□□ 0.81
APBA1-201ENST00000265381 PLEKHG5O94827 1062 aa20.11■□□□□ 0.81
APBA1-201ENST00000265381 HSP90AA1P07900 732 aaKnown RBP20.09■□□□□ 0.81
APBA1-201ENST00000265381 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
APBA1-201ENST00000265381 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.8
APBA1-201ENST00000265381 NPM1P06748 294 aaKnown RBP eCLIP19.98■□□□□ 0.79
APBA1-201ENST00000265381 FKBP8Q14318 412 aa19.97■□□□□ 0.79
APBA1-201ENST00000265381 UPF2Q9HAU5 1272 aaKnown RBP19.95■□□□□ 0.78
APBA1-201ENST00000265381 GLIPR1L2Q4G1C9 344 aa19.93■□□□□ 0.78
APBA1-201ENST00000265381 ZBTB7CA1YPR0 619 aa19.92■□□□□ 0.78
APBA1-201ENST00000265381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.77
APBA1-201ENST00000265381 ARXQ96QS3 562 aa19.86■□□□□ 0.77
APBA1-201ENST00000265381 HNRNPUQ00839 825 aaKnown RBP eCLIP19.85■□□□□ 0.77
APBA1-201ENST00000265381 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
APBA1-201ENST00000265381 NBR1Q14596 966 aa19.83■□□□□ 0.77
APBA1-201ENST00000265381 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
APBA1-201ENST00000265381 C14orf37Q86TY3 774 aa19.76■□□□□ 0.75
APBA1-201ENST00000265381 CCDC136Q96JN2 1154 aa19.75■□□□□ 0.75
APBA1-201ENST00000265381 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
APBA1-201ENST00000265381 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
APBA1-201ENST00000265381 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
APBA1-201ENST00000265381 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
APBA1-201ENST00000265381 TMC1Q8TDI8 760 aa19.66■□□□□ 0.74
APBA1-201ENST00000265381 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
APBA1-201ENST00000265381 CSRNP3Q8WYN3 585 aa19.61■□□□□ 0.73
APBA1-201ENST00000265381 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
APBA1-201ENST00000265381 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
APBA1-201ENST00000265381 CDK11BP21127 795 aaKnown RBP19.59■□□□□ 0.73
APBA1-201ENST00000265381 KCNH8Q96L42 1107 aa19.58■□□□□ 0.72
APBA1-201ENST00000265381 WDR43Q15061 677 aaKnown RBP eCLIP19.57■□□□□ 0.72
APBA1-201ENST00000265381 PPP1R15AO75807 674 aaPredicted RBP19.55■□□□□ 0.72
APBA1-201ENST00000265381 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
APBA1-201ENST00000265381 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
APBA1-201ENST00000265381 MRS2Q9HD23 443 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms