RNA–Protein interactions for RNA: ENST00000264071.6

TUBB4A-201, Transcript of tubulin beta 4A class IVa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4A, Length 2,552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4A-201ENST00000264071 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
TUBB4A-201ENST00000264071 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
TUBB4A-201ENST00000264071 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.07
TUBB4A-201ENST00000264071 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
TUBB4A-201ENST00000264071 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
TUBB4A-201ENST00000264071 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
TUBB4A-201ENST00000264071 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
TUBB4A-201ENST00000264071 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
TUBB4A-201ENST00000264071 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
TUBB4A-201ENST00000264071 HRCP23327 699 aa26.81■■□□□ 1.88
TUBB4A-201ENST00000264071 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.87
TUBB4A-201ENST00000264071 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
TUBB4A-201ENST00000264071 ABCC9O60706 1549 aa26.31■■□□□ 1.8
TUBB4A-201ENST00000264071 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
TUBB4A-201ENST00000264071 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
TUBB4A-201ENST00000264071 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.77
TUBB4A-201ENST00000264071 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
TUBB4A-201ENST00000264071 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
TUBB4A-201ENST00000264071 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
TUBB4A-201ENST00000264071 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
TUBB4A-201ENST00000264071 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
TUBB4A-201ENST00000264071 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
TUBB4A-201ENST00000264071 NACADO15069 1562 aa25.64■■□□□ 1.69
TUBB4A-201ENST00000264071 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
TUBB4A-201ENST00000264071 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
TUBB4A-201ENST00000264071 WIZO95785 1651 aa25.49■■□□□ 1.67
TUBB4A-201ENST00000264071 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
TUBB4A-201ENST00000264071 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
TUBB4A-201ENST00000264071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
TUBB4A-201ENST00000264071 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
TUBB4A-201ENST00000264071 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
TUBB4A-201ENST00000264071 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
TUBB4A-201ENST00000264071 CCER1Q8TC90 406 aaPredicted RBP24.99■■□□□ 1.59
TUBB4A-201ENST00000264071 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
TUBB4A-201ENST00000264071 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
TUBB4A-201ENST00000264071 TTBK1Q5TCY1 1321 aaPredicted RBP24.9■■□□□ 1.58
TUBB4A-201ENST00000264071 SCAF1Q9H7N4 1312 aaKnown RBP24.89■■□□□ 1.58
TUBB4A-201ENST00000264071 SOGA1O94964 1423 aa24.86■■□□□ 1.57
TUBB4A-201ENST00000264071 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
TUBB4A-201ENST00000264071 CEP162Q5TB80 1403 aa24.84■■□□□ 1.57
TUBB4A-201ENST00000264071 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.56
TUBB4A-201ENST00000264071 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
TUBB4A-201ENST00000264071 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
TUBB4A-201ENST00000264071 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
TUBB4A-201ENST00000264071 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
TUBB4A-201ENST00000264071 EEA1Q15075 1411 aa24.68■■□□□ 1.54
TUBB4A-201ENST00000264071 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
TUBB4A-201ENST00000264071 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
TUBB4A-201ENST00000264071 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
TUBB4A-201ENST00000264071 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
TUBB4A-201ENST00000264071 ACIN1Q9UKV3 1341 aaKnown RBP24.56■■□□□ 1.52
TUBB4A-201ENST00000264071 NEUROD1Q13562 356 aa24.53■■□□□ 1.52
TUBB4A-201ENST00000264071 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
TUBB4A-201ENST00000264071 PEG3Q9GZU2 1588 aa24.43■■□□□ 1.5
TUBB4A-201ENST00000264071 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
TUBB4A-201ENST00000264071 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
TUBB4A-201ENST00000264071 CENPBP07199 599 aaPredicted RBP24.38■■□□□ 1.49
TUBB4A-201ENST00000264071 ZNF316A6NFI3 1004 aaPredicted RBP24.35■■□□□ 1.49
TUBB4A-201ENST00000264071 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
TUBB4A-201ENST00000264071 KIF21BO75037 1637 aa24.34■■□□□ 1.49
TUBB4A-201ENST00000264071 CLIP1P30622 1438 aa24.33■■□□□ 1.49
TUBB4A-201ENST00000264071 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
TUBB4A-201ENST00000264071 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
TUBB4A-201ENST00000264071 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
TUBB4A-201ENST00000264071 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
TUBB4A-201ENST00000264071 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
TUBB4A-201ENST00000264071 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
TUBB4A-201ENST00000264071 APLP2Q06481 763 aa24.22■■□□□ 1.47
TUBB4A-201ENST00000264071 YTHDC1Q96MU7 727 aaKnown RBP24.11■■□□□ 1.45
TUBB4A-201ENST00000264071 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
TUBB4A-201ENST00000264071 MIER1Q8N108 512 aa24.06■■□□□ 1.44
TUBB4A-201ENST00000264071 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
TUBB4A-201ENST00000264071 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
TUBB4A-201ENST00000264071 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
TUBB4A-201ENST00000264071 ARAP1Q96P48 1450 aa23.89■■□□□ 1.41
TUBB4A-201ENST00000264071 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
TUBB4A-201ENST00000264071 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
TUBB4A-201ENST00000264071 CUX1P39880 1505 aa23.8■■□□□ 1.4
TUBB4A-201ENST00000264071 CLSPNQ9HAW4 1339 aa23.79■■□□□ 1.4
TUBB4A-201ENST00000264071 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
TUBB4A-201ENST00000264071 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
TUBB4A-201ENST00000264071 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
TUBB4A-201ENST00000264071 RRBP1Q9P2E9 1410 aaKnown RBP23.69■■□□□ 1.38
TUBB4A-201ENST00000264071 CFTRP13569 1480 aa23.65■■□□□ 1.38
TUBB4A-201ENST00000264071 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
TUBB4A-201ENST00000264071 ITGAEP38570 1179 aa23.63■■□□□ 1.37
TUBB4A-201ENST00000264071 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
TUBB4A-201ENST00000264071 CUX2O14529 1486 aa23.56■■□□□ 1.36
TUBB4A-201ENST00000264071 IGF1RP08069 1367 aa23.5■■□□□ 1.35
TUBB4A-201ENST00000264071 RAB3GAP2Q9H2M9 1393 aa23.46■■□□□ 1.35
TUBB4A-201ENST00000264071 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
TUBB4A-201ENST00000264071 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
TUBB4A-201ENST00000264071 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
TUBB4A-201ENST00000264071 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
TUBB4A-201ENST00000264071 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
TUBB4A-201ENST00000264071 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
TUBB4A-201ENST00000264071 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
TUBB4A-201ENST00000264071 MYT1Q01538 1121 aa23.35■■□□□ 1.33
TUBB4A-201ENST00000264071 SUPT16HQ9Y5B9 1047 aaKnown RBP23.35■■□□□ 1.33
TUBB4A-201ENST00000264071 LRRC9Q6ZRR7 1453 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms