RNA–Protein interactions for RNA: ENST00000263525.6

TNR-201, Transcript of tenascin R, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNR, Length 5,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNR-201ENST00000263525 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
TNR-201ENST00000263525 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
TNR-201ENST00000263525 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
TNR-201ENST00000263525 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.66
TNR-201ENST00000263525 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
TNR-201ENST00000263525 APLP2Q06481 763 aa24.69■■□□□ 1.54
TNR-201ENST00000263525 FAM9AQ8IZU1 332 aaPredicted RBP24.49■■□□□ 1.51
TNR-201ENST00000263525 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
TNR-201ENST00000263525 TTBK1Q5TCY1 1321 aaPredicted RBP24.08■■□□□ 1.45
TNR-201ENST00000263525 TRIM41Q8WV44 630 aa24■■□□□ 1.43
TNR-201ENST00000263525 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
TNR-201ENST00000263525 ATP1B4Q9UN42 357 aaPredicted RBP23.86■■□□□ 1.41
TNR-201ENST00000263525 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
TNR-201ENST00000263525 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
TNR-201ENST00000263525 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
TNR-201ENST00000263525 ZEB1P37275 1124 aaPredicted RBP23.57■■□□□ 1.36
TNR-201ENST00000263525 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.34
TNR-201ENST00000263525 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
TNR-201ENST00000263525 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
TNR-201ENST00000263525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
TNR-201ENST00000263525 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
TNR-201ENST00000263525 MYT1LQ9UL68 1186 aa23.06■■□□□ 1.28
TNR-201ENST00000263525 NEFLP07196 543 aa23.03■■□□□ 1.28
TNR-201ENST00000263525 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
TNR-201ENST00000263525 ITGAEP38570 1179 aa22.93■■□□□ 1.26
TNR-201ENST00000263525 YTHDC1Q96MU7 727 aaKnown RBP22.89■■□□□ 1.26
TNR-201ENST00000263525 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
TNR-201ENST00000263525 ABCC9O60706 1549 aa22.75■■□□□ 1.23
TNR-201ENST00000263525 LOC105371045A0A1W2PR82 267 aa22.74■■□□□ 1.23
TNR-201ENST00000263525 POLR3GLQ9BT43 218 aa22.73■■□□□ 1.23
TNR-201ENST00000263525 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
TNR-201ENST00000263525 HRCP23327 699 aa22.49■■□□□ 1.19
TNR-201ENST00000263525 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
TNR-201ENST00000263525 FAM50AQ14320 339 aaKnown RBP22.41■■□□□ 1.18
TNR-201ENST00000263525 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
TNR-201ENST00000263525 DAXXQ9UER7 740 aaPredicted RBP22.36■■□□□ 1.17
TNR-201ENST00000263525 TRIM52Q96A61 297 aa22.31■■□□□ 1.16
TNR-201ENST00000263525 FBLN2P98095 1184 aa22.27■■□□□ 1.15
TNR-201ENST00000263525 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
TNR-201ENST00000263525 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
TNR-201ENST00000263525 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
TNR-201ENST00000263525 MYT1Q01538 1121 aa21.99■■□□□ 1.11
TNR-201ENST00000263525 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
TNR-201ENST00000263525 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
TNR-201ENST00000263525 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
TNR-201ENST00000263525 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
TNR-201ENST00000263525 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
TNR-201ENST00000263525 ANP32CO43423 234 aa21.84■■□□□ 1.09
TNR-201ENST00000263525 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
TNR-201ENST00000263525 BCANQ96GW7 911 aa21.8■■□□□ 1.08
TNR-201ENST00000263525 ZNF777Q9ULD5 760 aaPredicted RBP21.79■■□□□ 1.08
TNR-201ENST00000263525 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
TNR-201ENST00000263525 ZBTB47Q9UFB7 747 aaPredicted RBP21.7■■□□□ 1.06
TNR-201ENST00000263525 NEFMP07197 916 aa21.68■■□□□ 1.06
TNR-201ENST00000263525 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
TNR-201ENST00000263525 ESF1Q9H501 851 aaKnown RBP21.66■■□□□ 1.06
TNR-201ENST00000263525 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
TNR-201ENST00000263525 NPM1P06748 294 aaKnown RBP eCLIP21.61■■□□□ 1.05
TNR-201ENST00000263525 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
TNR-201ENST00000263525 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
TNR-201ENST00000263525 STAG3Q9UJ98 1225 aa21.5■■□□□ 1.03
TNR-201ENST00000263525 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
TNR-201ENST00000263525 TONSLQ96HA7 1378 aa21.42■■□□□ 1.02
TNR-201ENST00000263525 BCL11AQ9H165 835 aa21.4■■□□□ 1.02
TNR-201ENST00000263525 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
TNR-201ENST00000263525 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
TNR-201ENST00000263525 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
TNR-201ENST00000263525 TSPY4P0CV99 314 aa21.31■■□□□ 1
TNR-201ENST00000263525 TSPY10P0CW01 314 aa21.31■■□□□ 1
TNR-201ENST00000263525 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
TNR-201ENST00000263525 CHIC2Q9UKJ5 165 aa21.3■■□□□ 1
TNR-201ENST00000263525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
TNR-201ENST00000263525 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
TNR-201ENST00000263525 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
TNR-201ENST00000263525 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
TNR-201ENST00000263525 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
TNR-201ENST00000263525 ANP32AP39687 249 aaKnown RBP21.1■□□□□ 0.97
TNR-201ENST00000263525 CLIP1P30622 1438 aa21.1■□□□□ 0.97
TNR-201ENST00000263525 HNRNPUQ00839 825 aaKnown RBP eCLIP21.09■□□□□ 0.97
TNR-201ENST00000263525 KDM2AQ9Y2K7 1162 aa21.09■□□□□ 0.97
TNR-201ENST00000263525 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.97
TNR-201ENST00000263525 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.97
TNR-201ENST00000263525 TMC1Q8TDI8 760 aa21.06■□□□□ 0.96
TNR-201ENST00000263525 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
TNR-201ENST00000263525 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
TNR-201ENST00000263525 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
TNR-201ENST00000263525 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
TNR-201ENST00000263525 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
TNR-201ENST00000263525 EEA1Q15075 1411 aa20.99■□□□□ 0.95
TNR-201ENST00000263525 NPM2Q86SE8 214 aaKnown RBP20.99■□□□□ 0.95
TNR-201ENST00000263525 FKBP8Q14318 412 aa20.97■□□□□ 0.95
TNR-201ENST00000263525 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
TNR-201ENST00000263525 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
TNR-201ENST00000263525 NACADO15069 1562 aa20.96■□□□□ 0.95
TNR-201ENST00000263525 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
TNR-201ENST00000263525 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.94■□□□□ 0.94
TNR-201ENST00000263525 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
TNR-201ENST00000263525 HSP90AA1P07900 732 aaKnown RBP20.93■□□□□ 0.94
TNR-201ENST00000263525 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
TNR-201ENST00000263525 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms