RNA–Protein interactions for RNA: ENST00000262483.12

PITPNM3-201, Transcript of PITPNM family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM3, Length 7,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM3-201ENST00000262483 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.69
PITPNM3-201ENST00000262483 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
PITPNM3-201ENST00000262483 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
PITPNM3-201ENST00000262483 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.41
PITPNM3-201ENST00000262483 PELP1Q8IZL8 1130 aaKnown RBP23.69■■□□□ 1.38
PITPNM3-201ENST00000262483 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
PITPNM3-201ENST00000262483 APLP2Q06481 763 aa23.32■■□□□ 1.32
PITPNM3-201ENST00000262483 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
PITPNM3-201ENST00000262483 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
PITPNM3-201ENST00000262483 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
PITPNM3-201ENST00000262483 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
PITPNM3-201ENST00000262483 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.25
PITPNM3-201ENST00000262483 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
PITPNM3-201ENST00000262483 ATP1B4Q9UN42 357 aaPredicted RBP22.66■■□□□ 1.22
PITPNM3-201ENST00000262483 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
PITPNM3-201ENST00000262483 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
PITPNM3-201ENST00000262483 ZEB1P37275 1124 aaPredicted RBP22.5■■□□□ 1.19
PITPNM3-201ENST00000262483 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
PITPNM3-201ENST00000262483 NEFLP07196 543 aa22.34■■□□□ 1.17
PITPNM3-201ENST00000262483 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
PITPNM3-201ENST00000262483 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
PITPNM3-201ENST00000262483 MYT1Q01538 1121 aa22.01■■□□□ 1.11
PITPNM3-201ENST00000262483 POLR3GLQ9BT43 218 aa21.92■■□□□ 1.1
PITPNM3-201ENST00000262483 DAXXQ9UER7 740 aaPredicted RBP21.86■■□□□ 1.09
PITPNM3-201ENST00000262483 ITGAEP38570 1179 aa21.85■■□□□ 1.09
PITPNM3-201ENST00000262483 CNGB1Q14028 1251 aaPredicted RBP21.79■■□□□ 1.08
PITPNM3-201ENST00000262483 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
PITPNM3-201ENST00000262483 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
PITPNM3-201ENST00000262483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
PITPNM3-201ENST00000262483 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
PITPNM3-201ENST00000262483 HRCP23327 699 aa21.66■■□□□ 1.06
PITPNM3-201ENST00000262483 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
PITPNM3-201ENST00000262483 LOC105371045A0A1W2PR82 267 aa21.53■■□□□ 1.04
PITPNM3-201ENST00000262483 SLC4A1APQ9BWU0 796 aaKnown RBP21.51■■□□□ 1.03
PITPNM3-201ENST00000262483 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
PITPNM3-201ENST00000262483 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
PITPNM3-201ENST00000262483 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
PITPNM3-201ENST00000262483 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
PITPNM3-201ENST00000262483 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
PITPNM3-201ENST00000262483 BCANQ96GW7 911 aa21.16■□□□□ 0.98
PITPNM3-201ENST00000262483 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
PITPNM3-201ENST00000262483 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
PITPNM3-201ENST00000262483 ZNF326Q5BKZ1 582 aaKnown RBP20.95■□□□□ 0.94
PITPNM3-201ENST00000262483 GTF3C3Q9Y5Q9 886 aa20.94■□□□□ 0.94
PITPNM3-201ENST00000262483 BCL11AQ9H165 835 aa20.93■□□□□ 0.94
PITPNM3-201ENST00000262483 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
PITPNM3-201ENST00000262483 ANP32CO43423 234 aa20.87■□□□□ 0.93
PITPNM3-201ENST00000262483 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
PITPNM3-201ENST00000262483 SLC24A1O60721 1099 aa20.83■□□□□ 0.93
PITPNM3-201ENST00000262483 CANXP27824 592 aaKnown RBP20.77■□□□□ 0.92
PITPNM3-201ENST00000262483 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
PITPNM3-201ENST00000262483 FBLN2P98095 1184 aa20.62■□□□□ 0.89
PITPNM3-201ENST00000262483 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
PITPNM3-201ENST00000262483 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
PITPNM3-201ENST00000262483 P3H3Q8IVL6 736 aa20.54■□□□□ 0.88
PITPNM3-201ENST00000262483 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
PITPNM3-201ENST00000262483 NEFMP07197 916 aa20.52■□□□□ 0.87
PITPNM3-201ENST00000262483 ACIN1Q9UKV3 1341 aaKnown RBP20.46■□□□□ 0.87
PITPNM3-201ENST00000262483 ABCC9O60706 1549 aa20.44■□□□□ 0.86
PITPNM3-201ENST00000262483 ZNF777Q9ULD5 760 aaPredicted RBP20.42■□□□□ 0.86
PITPNM3-201ENST00000262483 FKBP8Q14318 412 aa20.37■□□□□ 0.85
PITPNM3-201ENST00000262483 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
PITPNM3-201ENST00000262483 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
PITPNM3-201ENST00000262483 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
PITPNM3-201ENST00000262483 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
PITPNM3-201ENST00000262483 FAM9BQ8IZU0 186 aa20.24■□□□□ 0.83
PITPNM3-201ENST00000262483 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
PITPNM3-201ENST00000262483 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
PITPNM3-201ENST00000262483 HNRNPUQ00839 825 aaKnown RBP eCLIP20.21■□□□□ 0.83
PITPNM3-201ENST00000262483 NBR1Q14596 966 aa20.18■□□□□ 0.82
PITPNM3-201ENST00000262483 ARXQ96QS3 562 aa20.17■□□□□ 0.82
PITPNM3-201ENST00000262483 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
PITPNM3-201ENST00000262483 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
PITPNM3-201ENST00000262483 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
PITPNM3-201ENST00000262483 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
PITPNM3-201ENST00000262483 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
PITPNM3-201ENST00000262483 ESF1Q9H501 851 aaKnown RBP20.11■□□□□ 0.81
PITPNM3-201ENST00000262483 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
PITPNM3-201ENST00000262483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
PITPNM3-201ENST00000262483 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
PITPNM3-201ENST00000262483 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
PITPNM3-201ENST00000262483 TMC1Q8TDI8 760 aa20■□□□□ 0.79
PITPNM3-201ENST00000262483 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
PITPNM3-201ENST00000262483 KDM2AQ9Y2K7 1162 aa19.95■□□□□ 0.78
PITPNM3-201ENST00000262483 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.94■□□□□ 0.78
PITPNM3-201ENST00000262483 GLIPR1L2Q4G1C9 344 aa19.92■□□□□ 0.78
PITPNM3-201ENST00000262483 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
PITPNM3-201ENST00000262483 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
PITPNM3-201ENST00000262483 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
PITPNM3-201ENST00000262483 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
PITPNM3-201ENST00000262483 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
PITPNM3-201ENST00000262483 PLEKHG5O94827 1062 aa19.82■□□□□ 0.76
PITPNM3-201ENST00000262483 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
PITPNM3-201ENST00000262483 A0A0G2JS52 829 aa19.81■□□□□ 0.76
PITPNM3-201ENST00000262483 MIER1Q8N108 512 aa19.8■□□□□ 0.76
PITPNM3-201ENST00000262483 MYH16Q9H6N6 1097 aa19.79■□□□□ 0.76
PITPNM3-201ENST00000262483 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
PITPNM3-201ENST00000262483 SENP3-EIF4A1A0A087X0R7 540 aa19.75■□□□□ 0.75
PITPNM3-201ENST00000262483 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
PITPNM3-201ENST00000262483 CDK11BP21127 795 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms