RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 NISCHQ9Y2I1 1504 aa36.1■■■■□ 3.37
RHBDF1-201ENST00000262316 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.6
RHBDF1-201ENST00000262316 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
RHBDF1-201ENST00000262316 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
RHBDF1-201ENST00000262316 SUPT5HO00267 1087 aaKnown RBP30.49■■■□□ 2.47
RHBDF1-201ENST00000262316 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
RHBDF1-201ENST00000262316 ABCC9O60706 1549 aa29.43■■■□□ 2.3
RHBDF1-201ENST00000262316 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
RHBDF1-201ENST00000262316 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
RHBDF1-201ENST00000262316 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
RHBDF1-201ENST00000262316 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
RHBDF1-201ENST00000262316 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
RHBDF1-201ENST00000262316 LOC105371045A0A1W2PR82 267 aa28.53■■■□□ 2.16
RHBDF1-201ENST00000262316 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
RHBDF1-201ENST00000262316 NACADO15069 1562 aa28.48■■■□□ 2.15
RHBDF1-201ENST00000262316 EHMT2Q96KQ7 1210 aa28.39■■■□□ 2.14
RHBDF1-201ENST00000262316 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
RHBDF1-201ENST00000262316 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
RHBDF1-201ENST00000262316 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
RHBDF1-201ENST00000262316 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
RHBDF1-201ENST00000262316 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
RHBDF1-201ENST00000262316 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
RHBDF1-201ENST00000262316 WIZO95785 1651 aa28.01■■■□□ 2.07
RHBDF1-201ENST00000262316 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
RHBDF1-201ENST00000262316 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
RHBDF1-201ENST00000262316 PPARGC1BQ86YN6 1023 aaKnown RBP27.54■■■□□ 2
RHBDF1-201ENST00000262316 SMARCA4P51532 1647 aa27.53■■■□□ 2
RHBDF1-201ENST00000262316 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
RHBDF1-201ENST00000262316 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
RHBDF1-201ENST00000262316 ABCC8Q09428 1581 aa27.39■■□□□ 1.97
RHBDF1-201ENST00000262316 HRCP23327 699 aa27.37■■□□□ 1.97
RHBDF1-201ENST00000262316 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
RHBDF1-201ENST00000262316 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
RHBDF1-201ENST00000262316 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
RHBDF1-201ENST00000262316 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
RHBDF1-201ENST00000262316 SOGA1O94964 1423 aa27.11■■□□□ 1.93
RHBDF1-201ENST00000262316 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.92
RHBDF1-201ENST00000262316 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
RHBDF1-201ENST00000262316 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
RHBDF1-201ENST00000262316 RUSC2Q8N2Y8 1516 aa27.03■■□□□ 1.92
RHBDF1-201ENST00000262316 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
RHBDF1-201ENST00000262316 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
RHBDF1-201ENST00000262316 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
RHBDF1-201ENST00000262316 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.89
RHBDF1-201ENST00000262316 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
RHBDF1-201ENST00000262316 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
RHBDF1-201ENST00000262316 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
RHBDF1-201ENST00000262316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
RHBDF1-201ENST00000262316 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
RHBDF1-201ENST00000262316 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
RHBDF1-201ENST00000262316 EEA1Q15075 1411 aa26.43■■□□□ 1.82
RHBDF1-201ENST00000262316 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
RHBDF1-201ENST00000262316 CCER1Q8TC90 406 aaPredicted RBP26.4■■□□□ 1.82
RHBDF1-201ENST00000262316 RAPGEF2Q9Y4G8 1499 aa26.38■■□□□ 1.81
RHBDF1-201ENST00000262316 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
RHBDF1-201ENST00000262316 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
RHBDF1-201ENST00000262316 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
RHBDF1-201ENST00000262316 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
RHBDF1-201ENST00000262316 CLIP1P30622 1438 aa26.27■■□□□ 1.8
RHBDF1-201ENST00000262316 ZEB1P37275 1124 aaPredicted RBP26.25■■□□□ 1.79
RHBDF1-201ENST00000262316 CUX1P39880 1505 aa26.23■■□□□ 1.79
RHBDF1-201ENST00000262316 APLP2Q06481 763 aa26.23■■□□□ 1.79
RHBDF1-201ENST00000262316 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
RHBDF1-201ENST00000262316 CFTRP13569 1480 aa26.2■■□□□ 1.79
RHBDF1-201ENST00000262316 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
RHBDF1-201ENST00000262316 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
RHBDF1-201ENST00000262316 KIF21BO75037 1637 aa26.05■■□□□ 1.76
RHBDF1-201ENST00000262316 NESP48681 1621 aa26.05■■□□□ 1.76
RHBDF1-201ENST00000262316 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
RHBDF1-201ENST00000262316 P3H3Q8IVL6 736 aa26.03■■□□□ 1.76
RHBDF1-201ENST00000262316 CUX2O14529 1486 aa26.02■■□□□ 1.76
RHBDF1-201ENST00000262316 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
RHBDF1-201ENST00000262316 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
RHBDF1-201ENST00000262316 KANK4Q5T7N3 995 aaPredicted RBP25.97■■□□□ 1.75
RHBDF1-201ENST00000262316 ATP1B4Q9UN42 357 aaPredicted RBP25.97■■□□□ 1.75
RHBDF1-201ENST00000262316 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
RHBDF1-201ENST00000262316 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
RHBDF1-201ENST00000262316 ITGAEP38570 1179 aa25.9■■□□□ 1.74
RHBDF1-201ENST00000262316 FANCD2Q9BXW9 1451 aa25.9■■□□□ 1.74
RHBDF1-201ENST00000262316 IGF1RP08069 1367 aa25.89■■□□□ 1.74
RHBDF1-201ENST00000262316 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
RHBDF1-201ENST00000262316 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
RHBDF1-201ENST00000262316 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
RHBDF1-201ENST00000262316 ERICH3Q5RHP9 1530 aa25.71■■□□□ 1.71
RHBDF1-201ENST00000262316 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
RHBDF1-201ENST00000262316 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
RHBDF1-201ENST00000262316 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
RHBDF1-201ENST00000262316 TOPBP1Q92547 1522 aa25.62■■□□□ 1.69
RHBDF1-201ENST00000262316 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
RHBDF1-201ENST00000262316 DIEXFQ68CQ4 756 aaKnown RBP25.53■■□□□ 1.68
RHBDF1-201ENST00000262316 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
RHBDF1-201ENST00000262316 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
RHBDF1-201ENST00000262316 FHOD3Q2V2M9 1422 aa25.48■■□□□ 1.67
RHBDF1-201ENST00000262316 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
RHBDF1-201ENST00000262316 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
RHBDF1-201ENST00000262316 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
RHBDF1-201ENST00000262316 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
RHBDF1-201ENST00000262316 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
RHBDF1-201ENST00000262316 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
RHBDF1-201ENST00000262316 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms