RNA–Protein interactions for RNA: ENST00000258062.9

REPS1-201, Transcript of RALBP1 associated Eps domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene REPS1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS1-201ENST00000258062 NISCHQ9Y2I1 1504 aa33.54■■■□□ 2.96
REPS1-201ENST00000258062 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
REPS1-201ENST00000258062 CCDC180Q9P1Z9 1646 aa28.45■■■□□ 2.15
REPS1-201ENST00000258062 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
REPS1-201ENST00000258062 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
REPS1-201ENST00000258062 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
REPS1-201ENST00000258062 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.01
REPS1-201ENST00000258062 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
REPS1-201ENST00000258062 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
REPS1-201ENST00000258062 HRCP23327 699 aa27.02■■□□□ 1.92
REPS1-201ENST00000258062 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
REPS1-201ENST00000258062 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
REPS1-201ENST00000258062 ABCC9O60706 1549 aa26.77■■□□□ 1.88
REPS1-201ENST00000258062 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
REPS1-201ENST00000258062 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
REPS1-201ENST00000258062 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
REPS1-201ENST00000258062 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
REPS1-201ENST00000258062 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.81
REPS1-201ENST00000258062 NACADO15069 1562 aa26.37■■□□□ 1.81
REPS1-201ENST00000258062 RB1CC1Q8TDY2 1594 aa26.34■■□□□ 1.81
REPS1-201ENST00000258062 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
REPS1-201ENST00000258062 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
REPS1-201ENST00000258062 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
REPS1-201ENST00000258062 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
REPS1-201ENST00000258062 WIZO95785 1651 aa25.96■■□□□ 1.75
REPS1-201ENST00000258062 ZEB1P37275 1124 aaPredicted RBP25.85■■□□□ 1.73
REPS1-201ENST00000258062 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
REPS1-201ENST00000258062 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.69
REPS1-201ENST00000258062 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
REPS1-201ENST00000258062 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
REPS1-201ENST00000258062 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
REPS1-201ENST00000258062 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
REPS1-201ENST00000258062 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
REPS1-201ENST00000258062 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
REPS1-201ENST00000258062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.36■■□□□ 1.65
REPS1-201ENST00000258062 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
REPS1-201ENST00000258062 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
REPS1-201ENST00000258062 TTBK1Q5TCY1 1321 aaPredicted RBP25.31■■□□□ 1.64
REPS1-201ENST00000258062 SOGA1O94964 1423 aa25.31■■□□□ 1.64
REPS1-201ENST00000258062 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
REPS1-201ENST00000258062 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
REPS1-201ENST00000258062 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
REPS1-201ENST00000258062 UBTFP17480 764 aaKnown RBP25.2■■□□□ 1.62
REPS1-201ENST00000258062 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
REPS1-201ENST00000258062 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
REPS1-201ENST00000258062 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
REPS1-201ENST00000258062 EEA1Q15075 1411 aa25.13■■□□□ 1.61
REPS1-201ENST00000258062 GOLGA3Q08378 1498 aa25■■□□□ 1.59
REPS1-201ENST00000258062 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
REPS1-201ENST00000258062 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
REPS1-201ENST00000258062 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
REPS1-201ENST00000258062 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
REPS1-201ENST00000258062 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
REPS1-201ENST00000258062 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
REPS1-201ENST00000258062 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
REPS1-201ENST00000258062 CLIP1P30622 1438 aa24.76■■□□□ 1.55
REPS1-201ENST00000258062 HNRNPUL2Q1KMD3 747 aaKnown RBP24.74■■□□□ 1.55
REPS1-201ENST00000258062 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
REPS1-201ENST00000258062 KIF21BO75037 1637 aa24.72■■□□□ 1.55
REPS1-201ENST00000258062 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
REPS1-201ENST00000258062 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
REPS1-201ENST00000258062 APLP2Q06481 763 aa24.67■■□□□ 1.54
REPS1-201ENST00000258062 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
REPS1-201ENST00000258062 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
REPS1-201ENST00000258062 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
REPS1-201ENST00000258062 CENPBP07199 599 aaPredicted RBP24.58■■□□□ 1.53
REPS1-201ENST00000258062 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
REPS1-201ENST00000258062 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
REPS1-201ENST00000258062 GTF3C3Q9Y5Q9 886 aa24.47■■□□□ 1.51
REPS1-201ENST00000258062 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
REPS1-201ENST00000258062 PRXQ9BXM0 1461 aa24.36■■□□□ 1.49
REPS1-201ENST00000258062 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
REPS1-201ENST00000258062 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
REPS1-201ENST00000258062 NCAPD3P42695 1498 aa24.33■■□□□ 1.48
REPS1-201ENST00000258062 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
REPS1-201ENST00000258062 MIER1Q8N108 512 aa24.31■■□□□ 1.48
REPS1-201ENST00000258062 CUX1P39880 1505 aa24.29■■□□□ 1.48
REPS1-201ENST00000258062 ARAP1Q96P48 1450 aa24.29■■□□□ 1.48
REPS1-201ENST00000258062 KANK4Q5T7N3 995 aaPredicted RBP24.29■■□□□ 1.48
REPS1-201ENST00000258062 KIF27Q86VH2 1401 aa24.26■■□□□ 1.47
REPS1-201ENST00000258062 CFTRP13569 1480 aa24.18■■□□□ 1.46
REPS1-201ENST00000258062 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
REPS1-201ENST00000258062 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
REPS1-201ENST00000258062 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
REPS1-201ENST00000258062 RRBP1Q9P2E9 1410 aaKnown RBP24.06■■□□□ 1.44
REPS1-201ENST00000258062 ITGAEP38570 1179 aa24.05■■□□□ 1.44
REPS1-201ENST00000258062 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
REPS1-201ENST00000258062 CUX2O14529 1486 aa24.02■■□□□ 1.44
REPS1-201ENST00000258062 CCNB3Q8WWL7 1395 aa24.01■■□□□ 1.43
REPS1-201ENST00000258062 IGF1RP08069 1367 aa24.01■■□□□ 1.43
REPS1-201ENST00000258062 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
REPS1-201ENST00000258062 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
REPS1-201ENST00000258062 PRDM2Q13029 1718 aa23.88■■□□□ 1.41
REPS1-201ENST00000258062 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
REPS1-201ENST00000258062 P3H3Q8IVL6 736 aa23.83■■□□□ 1.4
REPS1-201ENST00000258062 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
REPS1-201ENST00000258062 ATP1B4Q9UN42 357 aaPredicted RBP23.81■■□□□ 1.4
REPS1-201ENST00000258062 TIAM1Q13009 1591 aa23.79■■□□□ 1.4
REPS1-201ENST00000258062 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
REPS1-201ENST00000258062 MAP3K1Q13233 1512 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms