RNA–Protein interactions for RNA: ENST00000256442.9

CCNB1-201, Transcript of cyclin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNB1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1-201ENST00000256442 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
CCNB1-201ENST00000256442 CCDC180Q9P1Z9 1646 aa26.02■■□□□ 1.76
CCNB1-201ENST00000256442 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
CCNB1-201ENST00000256442 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
CCNB1-201ENST00000256442 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
CCNB1-201ENST00000256442 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
CCNB1-201ENST00000256442 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
CCNB1-201ENST00000256442 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
CCNB1-201ENST00000256442 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
CCNB1-201ENST00000256442 ABCC9O60706 1549 aa24.41■■□□□ 1.5
CCNB1-201ENST00000256442 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
CCNB1-201ENST00000256442 HRCP23327 699 aa24.28■■□□□ 1.48
CCNB1-201ENST00000256442 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
CCNB1-201ENST00000256442 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
CCNB1-201ENST00000256442 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
CCNB1-201ENST00000256442 NACADO15069 1562 aa24.04■■□□□ 1.44
CCNB1-201ENST00000256442 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
CCNB1-201ENST00000256442 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
CCNB1-201ENST00000256442 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
CCNB1-201ENST00000256442 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.39
CCNB1-201ENST00000256442 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
CCNB1-201ENST00000256442 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
CCNB1-201ENST00000256442 WIZO95785 1651 aa23.6■■□□□ 1.37
CCNB1-201ENST00000256442 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
CCNB1-201ENST00000256442 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
CCNB1-201ENST00000256442 ZEB1P37275 1124 aaPredicted RBP23.39■■□□□ 1.33
CCNB1-201ENST00000256442 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
CCNB1-201ENST00000256442 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
CCNB1-201ENST00000256442 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
CCNB1-201ENST00000256442 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
CCNB1-201ENST00000256442 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
CCNB1-201ENST00000256442 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
CCNB1-201ENST00000256442 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
CCNB1-201ENST00000256442 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
CCNB1-201ENST00000256442 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
CCNB1-201ENST00000256442 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CCNB1-201ENST00000256442 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
CCNB1-201ENST00000256442 SOGA1O94964 1423 aa22.87■■□□□ 1.25
CCNB1-201ENST00000256442 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
CCNB1-201ENST00000256442 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
CCNB1-201ENST00000256442 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
CCNB1-201ENST00000256442 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
CCNB1-201ENST00000256442 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
CCNB1-201ENST00000256442 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
CCNB1-201ENST00000256442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
CCNB1-201ENST00000256442 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
CCNB1-201ENST00000256442 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
CCNB1-201ENST00000256442 GOLGA3Q08378 1498 aa22.7■■□□□ 1.22
CCNB1-201ENST00000256442 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
CCNB1-201ENST00000256442 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
CCNB1-201ENST00000256442 SYNJ1O43426 1573 aa22.58■■□□□ 1.21
CCNB1-201ENST00000256442 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
CCNB1-201ENST00000256442 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
CCNB1-201ENST00000256442 KIF21BO75037 1637 aa22.55■■□□□ 1.2
CCNB1-201ENST00000256442 CLIP1P30622 1438 aa22.42■■□□□ 1.18
CCNB1-201ENST00000256442 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
CCNB1-201ENST00000256442 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
CCNB1-201ENST00000256442 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
CCNB1-201ENST00000256442 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
CCNB1-201ENST00000256442 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
CCNB1-201ENST00000256442 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
CCNB1-201ENST00000256442 APLP2Q06481 763 aa22.28■■□□□ 1.16
CCNB1-201ENST00000256442 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
CCNB1-201ENST00000256442 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
CCNB1-201ENST00000256442 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
CCNB1-201ENST00000256442 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
CCNB1-201ENST00000256442 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
CCNB1-201ENST00000256442 ZNF316A6NFI3 1004 aaPredicted RBP22.19■■□□□ 1.14
CCNB1-201ENST00000256442 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
CCNB1-201ENST00000256442 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
CCNB1-201ENST00000256442 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
CCNB1-201ENST00000256442 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
CCNB1-201ENST00000256442 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
CCNB1-201ENST00000256442 CUX1P39880 1505 aa22.09■■□□□ 1.13
CCNB1-201ENST00000256442 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
CCNB1-201ENST00000256442 CFTRP13569 1480 aa22.05■■□□□ 1.12
CCNB1-201ENST00000256442 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
CCNB1-201ENST00000256442 CLSPNQ9HAW4 1339 aa21.93■■□□□ 1.1
CCNB1-201ENST00000256442 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
CCNB1-201ENST00000256442 GTF3C3Q9Y5Q9 886 aa21.89■■□□□ 1.1
CCNB1-201ENST00000256442 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
CCNB1-201ENST00000256442 RRBP1Q9P2E9 1410 aaKnown RBP21.84■■□□□ 1.09
CCNB1-201ENST00000256442 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.09
CCNB1-201ENST00000256442 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
CCNB1-201ENST00000256442 MIER1Q8N108 512 aa21.81■■□□□ 1.08
CCNB1-201ENST00000256442 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
CCNB1-201ENST00000256442 CUX2O14529 1486 aa21.79■■□□□ 1.08
CCNB1-201ENST00000256442 IGF1RP08069 1367 aa21.78■■□□□ 1.08
CCNB1-201ENST00000256442 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
CCNB1-201ENST00000256442 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
CCNB1-201ENST00000256442 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.07
CCNB1-201ENST00000256442 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
CCNB1-201ENST00000256442 MAP3K1Q13233 1512 aa21.69■■□□□ 1.06
CCNB1-201ENST00000256442 TIAM1Q13009 1591 aa21.63■■□□□ 1.05
CCNB1-201ENST00000256442 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
CCNB1-201ENST00000256442 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
CCNB1-201ENST00000256442 ITGAEP38570 1179 aa21.57■■□□□ 1.04
CCNB1-201ENST00000256442 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
CCNB1-201ENST00000256442 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
CCNB1-201ENST00000256442 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms