RNA–Protein interactions for RNA: ENST00000253083.8

HIP1R-201, Transcript of huntingtin interacting protein 1 related, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIP1R, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1R-201ENST00000253083 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.5
HIP1R-201ENST00000253083 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
HIP1R-201ENST00000253083 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
HIP1R-201ENST00000253083 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
HIP1R-201ENST00000253083 EHMT2Q96KQ7 1210 aa27.17■■□□□ 1.94
HIP1R-201ENST00000253083 FAM9AQ8IZU1 332 aaPredicted RBP26.8■■□□□ 1.88
HIP1R-201ENST00000253083 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
HIP1R-201ENST00000253083 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
HIP1R-201ENST00000253083 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
HIP1R-201ENST00000253083 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
HIP1R-201ENST00000253083 APLP2Q06481 763 aa26.07■■□□□ 1.76
HIP1R-201ENST00000253083 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.74
HIP1R-201ENST00000253083 RANGAP1P46060 587 aaPredicted RBP25.94■■□□□ 1.74
HIP1R-201ENST00000253083 UBTFP17480 764 aaKnown RBP25.82■■□□□ 1.72
HIP1R-201ENST00000253083 ABCC9O60706 1549 aa25.81■■□□□ 1.72
HIP1R-201ENST00000253083 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
HIP1R-201ENST00000253083 CCER1Q8TC90 406 aaPredicted RBP25.62■■□□□ 1.69
HIP1R-201ENST00000253083 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.68
HIP1R-201ENST00000253083 TRIM26Q12899 539 aaPredicted RBP25.57■■□□□ 1.68
HIP1R-201ENST00000253083 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
HIP1R-201ENST00000253083 HRCP23327 699 aa25.46■■□□□ 1.67
HIP1R-201ENST00000253083 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
HIP1R-201ENST00000253083 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
HIP1R-201ENST00000253083 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
HIP1R-201ENST00000253083 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
HIP1R-201ENST00000253083 CENPBP07199 599 aaPredicted RBP24.96■■□□□ 1.59
HIP1R-201ENST00000253083 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
HIP1R-201ENST00000253083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.58
HIP1R-201ENST00000253083 ITGAEP38570 1179 aa24.89■■□□□ 1.57
HIP1R-201ENST00000253083 PELP1Q8IZL8 1130 aaKnown RBP24.84■■□□□ 1.57
HIP1R-201ENST00000253083 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
HIP1R-201ENST00000253083 CSRNP3Q8WYN3 585 aa24.64■■□□□ 1.53
HIP1R-201ENST00000253083 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
HIP1R-201ENST00000253083 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
HIP1R-201ENST00000253083 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
HIP1R-201ENST00000253083 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
HIP1R-201ENST00000253083 FAM50AQ14320 339 aaKnown RBP24.33■■□□□ 1.49
HIP1R-201ENST00000253083 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
HIP1R-201ENST00000253083 NACADO15069 1562 aa24.28■■□□□ 1.48
HIP1R-201ENST00000253083 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
HIP1R-201ENST00000253083 P3H3Q8IVL6 736 aa24.21■■□□□ 1.47
HIP1R-201ENST00000253083 NEFLP07196 543 aa24.15■■□□□ 1.46
HIP1R-201ENST00000253083 NEUROD1Q13562 356 aa24.09■■□□□ 1.45
HIP1R-201ENST00000253083 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
HIP1R-201ENST00000253083 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
HIP1R-201ENST00000253083 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
HIP1R-201ENST00000253083 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
HIP1R-201ENST00000253083 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
HIP1R-201ENST00000253083 FBLN2P98095 1184 aa23.94■■□□□ 1.42
HIP1R-201ENST00000253083 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
HIP1R-201ENST00000253083 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
HIP1R-201ENST00000253083 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
HIP1R-201ENST00000253083 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
HIP1R-201ENST00000253083 CLIP1P30622 1438 aa23.82■■□□□ 1.4
HIP1R-201ENST00000253083 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
HIP1R-201ENST00000253083 BAZ1BQ9UIG0 1483 aaKnown RBP23.79■■□□□ 1.4
HIP1R-201ENST00000253083 ERICH6Q7L0X2 663 aa23.78■■□□□ 1.4
HIP1R-201ENST00000253083 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
HIP1R-201ENST00000253083 EEA1Q15075 1411 aa23.77■■□□□ 1.4
HIP1R-201ENST00000253083 GOLGA3Q08378 1498 aa23.71■■□□□ 1.39
HIP1R-201ENST00000253083 TNIKQ9UKE5 1360 aa23.67■■□□□ 1.38
HIP1R-201ENST00000253083 SOGA1O94964 1423 aa23.66■■□□□ 1.38
HIP1R-201ENST00000253083 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
HIP1R-201ENST00000253083 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
HIP1R-201ENST00000253083 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
HIP1R-201ENST00000253083 ANP32CO43423 234 aa23.56■■□□□ 1.36
HIP1R-201ENST00000253083 ZNF777Q9ULD5 760 aaPredicted RBP23.55■■□□□ 1.36
HIP1R-201ENST00000253083 WIZO95785 1651 aa23.54■■□□□ 1.36
HIP1R-201ENST00000253083 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
HIP1R-201ENST00000253083 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
HIP1R-201ENST00000253083 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
HIP1R-201ENST00000253083 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
HIP1R-201ENST00000253083 CHIC2Q9UKJ5 165 aa23.45■■□□□ 1.35
HIP1R-201ENST00000253083 BCANQ96GW7 911 aa23.45■■□□□ 1.34
HIP1R-201ENST00000253083 MTUS2Q5JR59 1369 aa23.39■■□□□ 1.34
HIP1R-201ENST00000253083 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
HIP1R-201ENST00000253083 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
HIP1R-201ENST00000253083 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
HIP1R-201ENST00000253083 MIER1Q8N108 512 aa23.33■■□□□ 1.32
HIP1R-201ENST00000253083 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
HIP1R-201ENST00000253083 HIRIP3Q9BW71 556 aaPredicted RBP23.25■■□□□ 1.31
HIP1R-201ENST00000253083 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
HIP1R-201ENST00000253083 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
HIP1R-201ENST00000253083 RRP7BPQ9NSQ0 103 aa23.21■■□□□ 1.31
HIP1R-201ENST00000253083 CUX2O14529 1486 aa23.2■■□□□ 1.31
HIP1R-201ENST00000253083 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
HIP1R-201ENST00000253083 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
HIP1R-201ENST00000253083 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
HIP1R-201ENST00000253083 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.3
HIP1R-201ENST00000253083 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.3
HIP1R-201ENST00000253083 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
HIP1R-201ENST00000253083 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
HIP1R-201ENST00000253083 MYT1Q01538 1121 aa23.11■■□□□ 1.29
HIP1R-201ENST00000253083 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
HIP1R-201ENST00000253083 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
HIP1R-201ENST00000253083 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
HIP1R-201ENST00000253083 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
HIP1R-201ENST00000253083 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
HIP1R-201ENST00000253083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.274e-7■■■■□ 23.1
HIP1R-201ENST00000253083 FKBP8Q14318 412 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms